RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 TNS4Q8IZW8 715 aa5.21□□□□□ -1.58
GPNMB-212ENST00000487890 KCTD15Q96SI1 283 aaPredicted RBP5.21□□□□□ -1.58
GPNMB-212ENST00000487890 FCF1Q9Y324 198 aaKnown RBP5.21□□□□□ -1.58
GPNMB-212ENST00000487890 TOPBP1Q92547 1522 aa5.2□□□□□ -1.58
GPNMB-212ENST00000487890 POTEMA6NI47 508 aa5.2□□□□□ -1.58
GPNMB-212ENST00000487890 ERVH48-1M5A8F1 160 aa5.2□□□□□ -1.58
GPNMB-212ENST00000487890 RECKO95980 971 aa5.2□□□□□ -1.58
GPNMB-212ENST00000487890 MYCP01106 439 aaPredicted RBP5.2□□□□□ -1.58
GPNMB-212ENST00000487890 NPR3P17342 541 aa5.2□□□□□ -1.58
GPNMB-212ENST00000487890 CCDC125Q86Z20 511 aa5.2□□□□□ -1.58
GPNMB-212ENST00000487890 RGL4Q8IZJ4 473 aa5.2□□□□□ -1.58
GPNMB-212ENST00000487890 HELQQ8TDG4 1101 aa5.2□□□□□ -1.58
GPNMB-212ENST00000487890 SCG3Q8WXD2 468 aaKnown RBP5.2□□□□□ -1.58
GPNMB-212ENST00000487890 COL26A1Q96A83 441 aa5.2□□□□□ -1.58
GPNMB-212ENST00000487890 KCTD12Q96CX2 325 aaKnown RBP5.2□□□□□ -1.58
GPNMB-212ENST00000487890 IL21Q9HBE4 155 aa5.2□□□□□ -1.58
GPNMB-212ENST00000487890 ATAD2Q6PL18 1390 aa5.19□□□□□ -1.58
GPNMB-212ENST00000487890 IGFBP4P22692 258 aa5.19□□□□□ -1.58
GPNMB-212ENST00000487890 SCNN1DP51172 638 aa5.19□□□□□ -1.58
GPNMB-212ENST00000487890 COL19A1Q14993 1142 aa5.19□□□□□ -1.58
GPNMB-212ENST00000487890 EAPPQ56P03 285 aaPredicted RBP5.19□□□□□ -1.58
GPNMB-212ENST00000487890 INTS6LQ5JSJ4 861 aaKnown RBP5.19□□□□□ -1.58
GPNMB-212ENST00000487890 SAP130Q9H0E3 1048 aa5.19□□□□□ -1.58
GPNMB-212ENST00000487890 CDV3Q9UKY7 258 aaKnown RBP5.19□□□□□ -1.58
GPNMB-212ENST00000487890 DNMBPQ6XZF7 1577 aa5.19□□□□□ -1.58
GPNMB-212ENST00000487890 PPEF1O14829 653 aaPredicted RBP5.18□□□□□ -1.58
GPNMB-212ENST00000487890 FOXO3O43524 673 aa5.18□□□□□ -1.58
GPNMB-212ENST00000487890 FAM13AO94988 1023 aa5.18□□□□□ -1.58
GPNMB-212ENST00000487890 P4HBP07237 508 aaKnown RBP5.18□□□□□ -1.58
GPNMB-212ENST00000487890 TSNAXIP1Q2TAA8 658 aa5.18□□□□□ -1.58
GPNMB-212ENST00000487890 NYAP1Q6ZVC0 841 aa5.18□□□□□ -1.58
GPNMB-212ENST00000487890 TMC7Q7Z402 723 aa5.18□□□□□ -1.58
GPNMB-212ENST00000487890 OSBPL3Q9H4L5 887 aa5.18□□□□□ -1.58
GPNMB-212ENST00000487890 SERTAD1Q9UHV2 236 aa5.18□□□□□ -1.58
GPNMB-212ENST00000487890 IFT140Q96RY7 1462 aa5.18□□□□□ -1.58
GPNMB-212ENST00000487890 ZNF608Q9ULD9 1512 aaPredicted RBP5.18□□□□□ -1.58
GPNMB-212ENST00000487890 EIF4G3O43432 1585 aaKnown RBP5.17□□□□□ -1.58
GPNMB-212ENST00000487890 ABCC8Q09428 1581 aa5.17□□□□□ -1.58
GPNMB-212ENST00000487890 A0A1W2PRU2 124 aa5.17□□□□□ -1.58
GPNMB-212ENST00000487890 MPSTP25325 297 aa5.17□□□□□ -1.58
GPNMB-212ENST00000487890 EPHA4P54764 986 aa5.17□□□□□ -1.58
GPNMB-212ENST00000487890 GDF10P55107 478 aa5.17□□□□□ -1.58
GPNMB-212ENST00000487890 ERVK-9P63128 1117 aa5.17□□□□□ -1.58
GPNMB-212ENST00000487890 CHMP7Q8WUX9 453 aaPredicted RBP5.17□□□□□ -1.58
GPNMB-212ENST00000487890 RBCK1Q9BYM8 510 aa5.17□□□□□ -1.58
GPNMB-212ENST00000487890 BACH2Q9BYV9 841 aa5.17□□□□□ -1.58
GPNMB-212ENST00000487890 TSPAN10Q9H1Z9 355 aaPredicted RBP5.17□□□□□ -1.58
GPNMB-212ENST00000487890 TMPRSS4Q9NRS4 437 aa5.17□□□□□ -1.58
GPNMB-212ENST00000487890 CHD1O14646 1710 aa5.17□□□□□ -1.58
GPNMB-212ENST00000487890 BACH1O14867 736 aa5.16□□□□□ -1.58
GPNMB-212ENST00000487890 PTPN5P54829 565 aa5.16□□□□□ -1.58
GPNMB-212ENST00000487890 SKOR1P84550 965 aa5.16□□□□□ -1.58
GPNMB-212ENST00000487890 MRPL58Q14197 206 aaKnown RBP5.16□□□□□ -1.58
GPNMB-212ENST00000487890 TBCELQ5QJ74 424 aa5.16□□□□□ -1.58
GPNMB-212ENST00000487890 LDLRAD1Q5T700 205 aa5.16□□□□□ -1.58
GPNMB-212ENST00000487890 CC2D2BQ6DHV5 1058 aa5.16□□□□□ -1.58
GPNMB-212ENST00000487890 POTEGQ6S5H5 508 aa5.16□□□□□ -1.58
GPNMB-212ENST00000487890 VASH1Q7L8A9 365 aaPredicted RBP5.16□□□□□ -1.58
GPNMB-212ENST00000487890 C8orf37Q96NL8 207 aa5.16□□□□□ -1.58
GPNMB-212ENST00000487890 ETNK1Q9HBU6 452 aa5.16□□□□□ -1.58
GPNMB-212ENST00000487890 CCDC87Q9NVE4 849 aa5.16□□□□□ -1.58
GPNMB-212ENST00000487890 MAP4K5Q9Y4K4 846 aa5.16□□□□□ -1.58
GPNMB-212ENST00000487890 TREHO43280 583 aa5.15□□□□□ -1.59
GPNMB-212ENST00000487890 INHAP05111 366 aa5.15□□□□□ -1.59
GPNMB-212ENST00000487890 VARSP26640 1264 aaKnown RBP5.15□□□□□ -1.59
GPNMB-212ENST00000487890 C9orf131Q5VYM1 1079 aa5.15□□□□□ -1.59
GPNMB-212ENST00000487890 C16orf46Q6P387 395 aa5.15□□□□□ -1.59
GPNMB-212ENST00000487890 DRC1Q96MC2 740 aa5.15□□□□□ -1.59
GPNMB-212ENST00000487890 SLC4A9Q96Q91 983 aa5.15□□□□□ -1.59
GPNMB-212ENST00000487890 ESF1Q9H501 851 aaKnown RBP5.15□□□□□ -1.59
GPNMB-212ENST00000487890 CYLDQ9NQC7 956 aa5.15□□□□□ -1.59
GPNMB-212ENST00000487890 RNF19AQ9NV58 838 aa5.15□□□□□ -1.59
GPNMB-212ENST00000487890 AQRO60306 1485 aaKnown RBP eCLIP5.14□□□□□ -1.59
GPNMB-212ENST00000487890 WASLO00401 505 aaPredicted RBP5.14□□□□□ -1.59
GPNMB-212ENST00000487890 TNFRSF10BO14763 440 aa5.14□□□□□ -1.59
GPNMB-212ENST00000487890 NDUFB5O43674 189 aa5.14□□□□□ -1.59
GPNMB-212ENST00000487890 PPP1R12BO60237 982 aaPredicted RBP5.14□□□□□ -1.59
GPNMB-212ENST00000487890 FZD6O60353 706 aa5.14□□□□□ -1.59
GPNMB-212ENST00000487890 IGHA2P01877 340 aa5.14□□□□□ -1.59
GPNMB-212ENST00000487890 GRM5P41594 1212 aa5.14□□□□□ -1.59
GPNMB-212ENST00000487890 EIF1AXP47813 144 aaKnown RBP5.14□□□□□ -1.59
GPNMB-212ENST00000487890 ZC3H6P61129 1189 aaKnown RBP5.14□□□□□ -1.59
GPNMB-212ENST00000487890 HDLBPQ00341 1268 aaKnown RBP5.14□□□□□ -1.59
GPNMB-212ENST00000487890 FOXK2Q01167 660 aa5.14□□□□□ -1.59
GPNMB-212ENST00000487890 PLCB3Q01970 1234 aa5.14□□□□□ -1.59
GPNMB-212ENST00000487890 FMR1Q06787 632 aaKnown RBP eCLIP5.14□□□□□ -1.59
GPNMB-212ENST00000487890 DSC3Q14574 896 aa5.14□□□□□ -1.59
GPNMB-212ENST00000487890 ARID5BQ14865 1188 aa5.14□□□□□ -1.59
GPNMB-212ENST00000487890 NAALADL2Q58DX5 795 aa5.14□□□□□ -1.59
GPNMB-212ENST00000487890 PLA2G2CQ5R387 149 aa5.14□□□□□ -1.59
GPNMB-212ENST00000487890 COX20Q5RI15 118 aa5.14□□□□□ -1.59
GPNMB-212ENST00000487890 SREK1Q8WXA9 508 aaKnown RBP5.14□□□□□ -1.59
GPNMB-212ENST00000487890 VTI1AQ96AJ9 217 aa5.14□□□□□ -1.59
GPNMB-212ENST00000487890 KRTAP3-3Q9BYR6 98 aa5.14□□□□□ -1.59
GPNMB-212ENST00000487890 KRTAP3-2Q9BYR7 98 aa5.14□□□□□ -1.59
GPNMB-212ENST00000487890 BRPF3Q9ULD4 1205 aa5.14□□□□□ -1.59
GPNMB-212ENST00000487890 TARBP1Q13395 1621 aaKnown RBP5.14□□□□□ -1.59
GPNMB-212ENST00000487890 POLA1P09884 1462 aaPredicted RBP5.13□□□□□ -1.59
GPNMB-212ENST00000487890 RAD54L2Q9Y4B4 1467 aa5.13□□□□□ -1.59
GPNMB-212ENST00000487890 RIMBP3CA6NJZ7 1639 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms