RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 PTF1AQ7RTS3 328 aa17.49■□□□□ 0.39
COL4A6-207ENST00000487645 PLSCR1O15162 318 aa17.48■□□□□ 0.39
COL4A6-207ENST00000487645 APBA3O96018 575 aa17.48■□□□□ 0.39
COL4A6-207ENST00000487645 DCTN1Q14203 1278 aa17.48■□□□□ 0.39
COL4A6-207ENST00000487645 MRC1P22897 1456 aa17.48■□□□□ 0.39
COL4A6-207ENST00000487645 TAF7Q15545 349 aaPredicted RBP17.46■□□□□ 0.39
COL4A6-207ENST00000487645 SMARCC1Q92922 1105 aaPredicted RBP17.46■□□□□ 0.39
COL4A6-207ENST00000487645 RGPD3A6NKT7 1758 aaPredicted RBP17.45■□□□□ 0.38
COL4A6-207ENST00000487645 RGPD4Q7Z3J3 1758 aa17.45■□□□□ 0.38
COL4A6-207ENST00000487645 BAG6P46379 1132 aa17.44■□□□□ 0.38
COL4A6-207ENST00000487645 CALD1Q05682 793 aaKnown RBP17.44■□□□□ 0.38
COL4A6-207ENST00000487645 ATG3Q9NT62 314 aa17.44■□□□□ 0.38
COL4A6-207ENST00000487645 BABAM1Q9NWV8 329 aa17.44■□□□□ 0.38
COL4A6-207ENST00000487645 WWC1Q8IX03 1113 aa17.43■□□□□ 0.38
COL4A6-207ENST00000487645 THUMPD2Q9BTF0 503 aaKnown RBP17.43■□□□□ 0.38
COL4A6-207ENST00000487645 ASAP1Q9ULH1 1129 aa17.43■□□□□ 0.38
COL4A6-207ENST00000487645 LY75O60449 1722 aa17.43■□□□□ 0.38
COL4A6-207ENST00000487645 BTBD11A6QL63 1104 aa17.42■□□□□ 0.38
COL4A6-207ENST00000487645 SOCS7O14512 581 aa17.42■□□□□ 0.38
COL4A6-207ENST00000487645 WDR63Q8IWG1 891 aa17.41■□□□□ 0.38
COL4A6-207ENST00000487645 CAMKK2Q96RR4 588 aa17.41■□□□□ 0.38
COL4A6-207ENST00000487645 PAPPAQ13219 1627 aa17.4■□□□□ 0.38
COL4A6-207ENST00000487645 HMGB2P26583 209 aaKnown RBP17.4■□□□□ 0.38
COL4A6-207ENST00000487645 ZNF790Q6PG37 636 aa17.4■□□□□ 0.38
COL4A6-207ENST00000487645 SALL2Q9Y467 1007 aaPredicted RBP17.4■□□□□ 0.38
COL4A6-207ENST00000487645 ZNF831Q5JPB2 1677 aa17.39■□□□□ 0.37
COL4A6-207ENST00000487645 UBR2Q8IWV8 1755 aa17.39■□□□□ 0.37
COL4A6-207ENST00000487645 SENP3-EIF4A1A0A087X0R7 540 aa17.39■□□□□ 0.37
COL4A6-207ENST00000487645 CHL1O00533 1208 aa17.39■□□□□ 0.37
COL4A6-207ENST00000487645 EN1Q05925 392 aaPredicted RBP17.39■□□□□ 0.37
COL4A6-207ENST00000487645 SLC39A6Q13433 755 aa17.39■□□□□ 0.37
COL4A6-207ENST00000487645 DEFB132Q7Z7B7 95 aa17.39■□□□□ 0.37
COL4A6-207ENST00000487645 CFAP44Q96MT7 982 aa17.39■□□□□ 0.37
COL4A6-207ENST00000487645 IL16Q14005 1332 aa17.39■□□□□ 0.37
COL4A6-207ENST00000487645 PALLDQ8WX93 1383 aa17.39■□□□□ 0.37
COL4A6-207ENST00000487645 KDM3BQ7LBC6 1761 aa17.38■□□□□ 0.37
COL4A6-207ENST00000487645 GNAI1P63096 354 aa17.38■□□□□ 0.37
COL4A6-207ENST00000487645 SLC27A3Q5K4L6 730 aa17.38■□□□□ 0.37
COL4A6-207ENST00000487645 TTC5Q8N0Z6 440 aa17.38■□□□□ 0.37
COL4A6-207ENST00000487645 PROM2Q8N271 834 aa17.38■□□□□ 0.37
COL4A6-207ENST00000487645 ZNF853P0CG23 659 aa17.37■□□□□ 0.37
COL4A6-207ENST00000487645 EZH2Q15910 746 aaKnown RBP17.37■□□□□ 0.37
COL4A6-207ENST00000487645 TXNRD1Q16881 649 aa17.37■□□□□ 0.37
COL4A6-207ENST00000487645 IFT57Q9NWB7 429 aa17.37■□□□□ 0.37
COL4A6-207ENST00000487645 ZNF521Q96K83 1311 aa17.37■□□□□ 0.37
COL4A6-207ENST00000487645 TAF1LQ8IZX4 1826 aa17.36■□□□□ 0.37
COL4A6-207ENST00000487645 LOC102724428A0A0B4J2F2 783 aa17.36■□□□□ 0.37
COL4A6-207ENST00000487645 SIK1P57059 783 aa17.36■□□□□ 0.37
COL4A6-207ENST00000487645 VSIG10Q8N0Z9 540 aa17.36■□□□□ 0.37
COL4A6-207ENST00000487645 RBM42Q9BTD8 480 aaKnown RBP17.36■□□□□ 0.37
COL4A6-207ENST00000487645 MIS18AQ9NYP9 233 aa17.36■□□□□ 0.37
COL4A6-207ENST00000487645 TSPYL4Q9UJ04 414 aa17.36■□□□□ 0.37
COL4A6-207ENST00000487645 PTCD1O75127 700 aaKnown RBP17.35■□□□□ 0.37
COL4A6-207ENST00000487645 FMNL2Q96PY5 1086 aa17.35■□□□□ 0.37
COL4A6-207ENST00000487645 LAS1LQ9Y4W2 734 aaKnown RBP17.35■□□□□ 0.37
COL4A6-207ENST00000487645 RREB1Q92766 1687 aa17.35■□□□□ 0.37
COL4A6-207ENST00000487645 KCNQ3O43525 872 aa17.34■□□□□ 0.37
COL4A6-207ENST00000487645 HNRNPUQ00839 825 aaKnown RBP eCLIP17.34■□□□□ 0.37
COL4A6-207ENST00000487645 KCPQ6ZWJ8 1503 aa17.34■□□□□ 0.37
COL4A6-207ENST00000487645 ZNF496Q96IT1 587 aaPredicted RBP17.34■□□□□ 0.37
COL4A6-207ENST00000487645 CCNL1Q9UK58 526 aaPredicted RBP17.34■□□□□ 0.37
COL4A6-207ENST00000487645 ATP6V1AP38606 617 aa17.33■□□□□ 0.36
COL4A6-207ENST00000487645 EIF4A1P60842 406 aaKnown RBP17.33■□□□□ 0.36
COL4A6-207ENST00000487645 TEX13AQ9BXU3 409 aaPredicted RBP17.33■□□□□ 0.36
COL4A6-207ENST00000487645 LRRC4BQ9NT99 713 aa17.33■□□□□ 0.36
COL4A6-207ENST00000487645 CICQ96RK0 1608 aaPredicted RBP17.32■□□□□ 0.36
COL4A6-207ENST00000487645 HEG1Q9ULI3 1381 aa17.32■□□□□ 0.36
COL4A6-207ENST00000487645 GOLGA2Q08379 1002 aa17.32■□□□□ 0.36
COL4A6-207ENST00000487645 SLC4A9Q96Q91 983 aa17.32■□□□□ 0.36
COL4A6-207ENST00000487645 MBIPQ9NS73 344 aa17.32■□□□□ 0.36
COL4A6-207ENST00000487645 NUP188Q5SRE5 1749 aa17.3■□□□□ 0.36
COL4A6-207ENST00000487645 C5P01031 1676 aa17.3■□□□□ 0.36
COL4A6-207ENST00000487645 SNRPA1P09661 255 aaKnown RBP17.3■□□□□ 0.36
COL4A6-207ENST00000487645 COL5A3P25940 1745 aaPredicted RBP17.3■□□□□ 0.36
COL4A6-207ENST00000487645 KCNQ4P56696 695 aa17.29■□□□□ 0.36
COL4A6-207ENST00000487645 ITPK1Q13572 414 aa17.29■□□□□ 0.36
COL4A6-207ENST00000487645 MYH16Q9H6N6 1097 aa17.29■□□□□ 0.36
COL4A6-207ENST00000487645 TJP1Q07157 1748 aa17.29■□□□□ 0.36
COL4A6-207ENST00000487645 E9PSI1 815 aa17.28■□□□□ 0.36
COL4A6-207ENST00000487645 GIGYF1O75420 1035 aaPredicted RBP17.28■□□□□ 0.36
COL4A6-207ENST00000487645 RC3H1Q5TC82 1133 aaKnown RBP17.28■□□□□ 0.36
COL4A6-207ENST00000487645 SPINK5Q9NQ38 1064 aaPredicted RBP17.28■□□□□ 0.36
COL4A6-207ENST00000487645 MYH14Q7Z406 1995 aaKnown RBP17.28■□□□□ 0.36
COL4A6-207ENST00000487645 ZBED9Q6R2W3 1325 aa17.27■□□□□ 0.36
COL4A6-207ENST00000487645 STARD3NLO95772 234 aa17.27■□□□□ 0.36
COL4A6-207ENST00000487645 SLFN5Q08AF3 891 aa17.27■□□□□ 0.36
COL4A6-207ENST00000487645 NBPF14Q5TI25 921 aa17.27■□□□□ 0.36
COL4A6-207ENST00000487645 DNAJC10Q8IXB1 793 aa17.27■□□□□ 0.36
COL4A6-207ENST00000487645 SOS1Q07889 1333 aaPredicted RBP17.26■□□□□ 0.35
COL4A6-207ENST00000487645 HOXB7P09629 217 aa17.26■□□□□ 0.35
COL4A6-207ENST00000487645 CYP19A1P11511 503 aaPredicted RBP17.26■□□□□ 0.35
COL4A6-207ENST00000487645 TRMT2AQ8IZ69 625 aaKnown RBP17.26■□□□□ 0.35
COL4A6-207ENST00000487645 LINC00116Q8NCU8 138 aa17.26■□□□□ 0.35
COL4A6-207ENST00000487645 TSR2Q969E8 191 aaKnown RBP17.26■□□□□ 0.35
COL4A6-207ENST00000487645 USP16Q9Y5T5 823 aa17.26■□□□□ 0.35
COL4A6-207ENST00000487645 C4BP0C0L5 1744 aa17.26■□□□□ 0.35
COL4A6-207ENST00000487645 AKT1S1Q96B36 256 aa17.25■□□□□ 0.35
COL4A6-207ENST00000487645 LAMB4A4D0S4 1761 aa17.25■□□□□ 0.35
COL4A6-207ENST00000487645 CNTNAP4Q9C0A0 1308 aa17.24■□□□□ 0.35
COL4A6-207ENST00000487645 FANCIQ9NVI1 1328 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms