RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 ANKRD24Q8TF21 1146 aa14.22□□□□□ -0.13
TRA2B-214ENST00000487615 SETBP1Q9Y6X0 1596 aa14.22□□□□□ -0.13
TRA2B-214ENST00000487615 GLI2P10070 1586 aa14.21□□□□□ -0.13
TRA2B-214ENST00000487615 PI4KAP2A4QPH2 592 aa14.21□□□□□ -0.13
TRA2B-214ENST00000487615 PI4KAP1Q8N8J0 262 aa14.21□□□□□ -0.13
TRA2B-214ENST00000487615 PPRC1Q5VV67 1664 aaKnown RBP14.21□□□□□ -0.13
TRA2B-214ENST00000487615 CHL1O00533 1208 aa14.21□□□□□ -0.13
TRA2B-214ENST00000487615 CWC27Q6UX04 472 aaKnown RBP14.21□□□□□ -0.13
TRA2B-214ENST00000487615 DDX54Q8TDD1 881 aaKnown RBP14.21□□□□□ -0.13
TRA2B-214ENST00000487615 DNAJC2Q99543 621 aaKnown RBP14.21□□□□□ -0.13
TRA2B-214ENST00000487615 HOXC9P31274 260 aa14.21□□□□□ -0.13
TRA2B-214ENST00000487615 SF3A1Q15459 793 aaKnown RBP14.21□□□□□ -0.13
TRA2B-214ENST00000487615 HYPKQ9NX55 129 aa14.21□□□□□ -0.13
TRA2B-214ENST00000487615 NASPP49321 788 aaPredicted RBP14.2□□□□□ -0.14
TRA2B-214ENST00000487615 CEP85Q6P2H3 762 aa14.2□□□□□ -0.14
TRA2B-214ENST00000487615 CYP46A1Q9Y6A2 500 aa14.2□□□□□ -0.14
TRA2B-214ENST00000487615 FAM135BQ49AJ0 1406 aa14.2□□□□□ -0.14
TRA2B-214ENST00000487615 AATKQ6ZMQ8 1374 aa14.2□□□□□ -0.14
TRA2B-214ENST00000487615 SDSP20132 328 aa14.19□□□□□ -0.14
TRA2B-214ENST00000487615 MAP3K5Q99683 1374 aa14.19□□□□□ -0.14
TRA2B-214ENST00000487615 PPP1R42Q7Z4L9 355 aa14.19□□□□□ -0.14
TRA2B-214ENST00000487615 CPLX2Q6PUV4 134 aaKnown RBP14.19□□□□□ -0.14
TRA2B-214ENST00000487615 ANXA1P04083 346 aa14.18□□□□□ -0.14
TRA2B-214ENST00000487615 WASHC4Q2M389 1173 aa14.18□□□□□ -0.14
TRA2B-214ENST00000487615 UPF3BQ9BZI7 483 aaKnown RBP14.18□□□□□ -0.14
TRA2B-214ENST00000487615 WDR33Q9C0J8 1336 aaKnown RBP14.18□□□□□ -0.14
TRA2B-214ENST00000487615 APPP05067 770 aa14.18□□□□□ -0.14
TRA2B-214ENST00000487615 PDCP20941 246 aa14.18□□□□□ -0.14
TRA2B-214ENST00000487615 TRDNQ13061 729 aa14.18□□□□□ -0.14
TRA2B-214ENST00000487615 AKAP4Q5JQC9 854 aa14.18□□□□□ -0.14
TRA2B-214ENST00000487615 KIF6Q6ZMV9 814 aa14.18□□□□□ -0.14
TRA2B-214ENST00000487615 RBM42Q9BTD8 480 aaKnown RBP14.18□□□□□ -0.14
TRA2B-214ENST00000487615 PDE1AP54750 535 aa14.17□□□□□ -0.14
TRA2B-214ENST00000487615 IL27Q8NEV9 243 aa14.17□□□□□ -0.14
TRA2B-214ENST00000487615 QRICH2Q9H0J4 1663 aa14.17□□□□□ -0.14
TRA2B-214ENST00000487615 CPLX1O14810 134 aa14.17□□□□□ -0.14
TRA2B-214ENST00000487615 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.17□□□□□ -0.14
TRA2B-214ENST00000487615 CHPF2Q9P2E5 772 aa14.17□□□□□ -0.14
TRA2B-214ENST00000487615 MAP3K2Q9Y2U5 619 aa14.17□□□□□ -0.14
TRA2B-214ENST00000487615 C16orf71Q8IYS4 520 aaPredicted RBP14.17□□□□□ -0.14
TRA2B-214ENST00000487615 SOS1Q07889 1333 aaPredicted RBP14.17□□□□□ -0.14
TRA2B-214ENST00000487615 TSHZ3Q63HK5 1081 aa14.17□□□□□ -0.14
TRA2B-214ENST00000487615 IP6K1Q92551 441 aa14.17□□□□□ -0.14
TRA2B-214ENST00000487615 TNPO1Q92973 898 aaKnown RBP14.17□□□□□ -0.14
TRA2B-214ENST00000487615 KIDINS220Q9ULH0 1771 aa14.16□□□□□ -0.14
TRA2B-214ENST00000487615 ATP8B2P98198 1209 aa14.16□□□□□ -0.14
TRA2B-214ENST00000487615 PLEKHM2Q8IWE5 1019 aa14.16□□□□□ -0.14
TRA2B-214ENST00000487615 BICD2Q8TD16 824 aa14.16□□□□□ -0.14
TRA2B-214ENST00000487615 CADPS2Q86UW7 1296 aa14.16□□□□□ -0.14
TRA2B-214ENST00000487615 IFNL2Q8IZJ0 200 aa14.16□□□□□ -0.14
TRA2B-214ENST00000487615 MYD88Q99836 296 aa14.16□□□□□ -0.14
TRA2B-214ENST00000487615 GRPEL1Q9HAV7 217 aa14.16□□□□□ -0.14
TRA2B-214ENST00000487615 MSH6P52701 1360 aa14.16□□□□□ -0.14
TRA2B-214ENST00000487615 SNX21Q969T3 373 aa14.15□□□□□ -0.14
TRA2B-214ENST00000487615 LRRC59Q96AG4 307 aaKnown RBP14.15□□□□□ -0.14
TRA2B-214ENST00000487615 RALYLQ86SE5 291 aaKnown RBP14.15□□□□□ -0.14
TRA2B-214ENST00000487615 JAKMIP1Q96N16 626 aaKnown RBP14.15□□□□□ -0.14
TRA2B-214ENST00000487615 PLEKHG1Q9ULL1 1385 aa14.15□□□□□ -0.14
TRA2B-214ENST00000487615 GCP02774 474 aa14.15□□□□□ -0.14
TRA2B-214ENST00000487615 IQGAP1P46940 1657 aa14.15□□□□□ -0.14
TRA2B-214ENST00000487615 TPM4P67936 248 aa14.15□□□□□ -0.14
TRA2B-214ENST00000487615 ANKRD1Q15327 319 aa14.15□□□□□ -0.14
TRA2B-214ENST00000487615 RHPN1Q8TCX5 695 aa14.15□□□□□ -0.14
TRA2B-214ENST00000487615 A2ML1A8K2U0 1454 aa14.14□□□□□ -0.15
TRA2B-214ENST00000487615 BLOC1S2Q6QNY1 142 aa14.14□□□□□ -0.15
TRA2B-214ENST00000487615 G2E3Q7L622 706 aa14.14□□□□□ -0.15
TRA2B-214ENST00000487615 FMNL2Q96PY5 1086 aa14.14□□□□□ -0.15
TRA2B-214ENST00000487615 ARHGEF10O15013 1369 aa14.14□□□□□ -0.15
TRA2B-214ENST00000487615 KIAA1210Q9ULL0 1709 aa14.14□□□□□ -0.15
TRA2B-214ENST00000487615 KIAA0232Q92628 1395 aa14.14□□□□□ -0.15
TRA2B-214ENST00000487615 CAMSAP1Q5T5Y3 1602 aa14.14□□□□□ -0.15
TRA2B-214ENST00000487615 SSFA2P28290 1259 aa14.14□□□□□ -0.15
TRA2B-214ENST00000487615 SYNE3Q6ZMZ3 975 aa14.14□□□□□ -0.15
TRA2B-214ENST00000487615 CCDC34Q96HJ3 373 aa14.14□□□□□ -0.15
TRA2B-214ENST00000487615 ABCC4O15439 1325 aa14.14□□□□□ -0.15
TRA2B-214ENST00000487615 FIBPO43427 364 aa14.13□□□□□ -0.15
TRA2B-214ENST00000487615 ECHDC1Q9NTX5 307 aa14.13□□□□□ -0.15
TRA2B-214ENST00000487615 ROBO2Q9HCK4 1378 aa14.13□□□□□ -0.15
TRA2B-214ENST00000487615 PTCD1O75127 700 aaKnown RBP14.13□□□□□ -0.15
TRA2B-214ENST00000487615 RNF214Q8ND24 703 aa14.13□□□□□ -0.15
TRA2B-214ENST00000487615 PDRG1Q9NUG6 133 aa14.13□□□□□ -0.15
TRA2B-214ENST00000487615 BABAM1Q9NWV8 329 aa14.13□□□□□ -0.15
TRA2B-214ENST00000487615 CCDC57Q2TAC2 916 aa14.13□□□□□ -0.15
TRA2B-214ENST00000487615 CCDC158Q5M9N0 1113 aa14.13□□□□□ -0.15
TRA2B-214ENST00000487615 ZSCAN31Q96LW9 406 aaPredicted RBP14.13□□□□□ -0.15
TRA2B-214ENST00000487615 PHF23Q9BUL5 403 aaPredicted RBP14.13□□□□□ -0.15
TRA2B-214ENST00000487615 GOLGA6L19H0YKK7 550 aa14.12□□□□□ -0.15
TRA2B-214ENST00000487615 CASTP20810 708 aaKnown RBP14.12□□□□□ -0.15
TRA2B-214ENST00000487615 PRR36Q9H6K5 1346 aa14.12□□□□□ -0.15
TRA2B-214ENST00000487615 ALKQ9UM73 1620 aa14.12□□□□□ -0.15
TRA2B-214ENST00000487615 BOLA2Q9H3K6 86 aa14.12□□□□□ -0.15
TRA2B-214ENST00000487615 DIP2CQ9Y2E4 1556 aa14.12□□□□□ -0.15
TRA2B-214ENST00000487615 CEP126Q9P2H0 1117 aa14.12□□□□□ -0.15
TRA2B-214ENST00000487615 ALDH1L1O75891 902 aa14.11□□□□□ -0.15
TRA2B-214ENST00000487615 CCDC8Q9H0W5 538 aaPredicted RBP14.11□□□□□ -0.15
TRA2B-214ENST00000487615 C19orf44Q9H6X5 657 aa14.11□□□□□ -0.15
TRA2B-214ENST00000487615 BECN2A8MW95 431 aa14.11□□□□□ -0.15
TRA2B-214ENST00000487615 CHRNA2Q15822 529 aa14.11□□□□□ -0.15
TRA2B-214ENST00000487615 NPHP3Q7Z494 1330 aa14.11□□□□□ -0.15
TRA2B-214ENST00000487615 CDK12Q9NYV4 1490 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms