RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 NBPF14Q5TI25 921 aa8.26□□□□□ -1.09
CNN3-206ENST00000487539 RIPOR1Q6ZS17 1223 aa8.26□□□□□ -1.09
CNN3-206ENST00000487539 RIC3Q7Z5B4 369 aa8.26□□□□□ -1.09
CNN3-206ENST00000487539 GTPBP3Q969Y2 492 aaKnown RBP8.26□□□□□ -1.09
CNN3-206ENST00000487539 RRAGCQ9HB90 399 aa8.26□□□□□ -1.09
CNN3-206ENST00000487539 RHOQP17081 205 aa8.25□□□□□ -1.09
CNN3-206ENST00000487539 MX2P20592 715 aa8.25□□□□□ -1.09
CNN3-206ENST00000487539 DHX9Q08211 1270 aaKnown RBP8.25□□□□□ -1.09
CNN3-206ENST00000487539 DOC2BQ14184 412 aa8.25□□□□□ -1.09
CNN3-206ENST00000487539 TUSC1Q2TAM9 212 aa8.25□□□□□ -1.09
CNN3-206ENST00000487539 PRICKLE2Q7Z3G6 844 aa8.25□□□□□ -1.09
CNN3-206ENST00000487539 CD163Q86VB7 1156 aa8.25□□□□□ -1.09
CNN3-206ENST00000487539 KCTD15Q96SI1 283 aaPredicted RBP8.25□□□□□ -1.09
CNN3-206ENST00000487539 SHISA8B8ZZ34 492 aa8.24□□□□□ -1.09
CNN3-206ENST00000487539 HRCP23327 699 aa8.24□□□□□ -1.09
CNN3-206ENST00000487539 CLK2P49760 499 aaKnown RBP8.24□□□□□ -1.09
CNN3-206ENST00000487539 SH3D19Q5HYK7 790 aa8.24□□□□□ -1.09
CNN3-206ENST00000487539 TRERF1Q96PN7 1200 aa8.24□□□□□ -1.09
CNN3-206ENST00000487539 SUV39H2Q9H5I1 410 aa8.24□□□□□ -1.09
CNN3-206ENST00000487539 NSFL1CQ9UNZ2 370 aaKnown RBP8.24□□□□□ -1.09
CNN3-206ENST00000487539 ABCA5Q8WWZ7 1642 aa8.24□□□□□ -1.09
CNN3-206ENST00000487539 SKIV2LQ15477 1246 aaKnown RBP8.23□□□□□ -1.09
CNN3-206ENST00000487539 OXCT2Q9BYC2 517 aaPredicted RBP8.23□□□□□ -1.09
CNN3-206ENST00000487539 ZBTB3Q9H5J0 574 aa8.23□□□□□ -1.09
CNN3-206ENST00000487539 GOPCQ9HD26 462 aa8.22□□□□□ -1.09
CNN3-206ENST00000487539 ADAMTS12P58397 1594 aa8.22□□□□□ -1.09
CNN3-206ENST00000487539 TSC1Q92574 1164 aa8.21□□□□□ -1.1
CNN3-206ENST00000487539 POLR3EQ9NVU0 708 aa8.21□□□□□ -1.1
CNN3-206ENST00000487539 LIMD1Q9UGP4 676 aa8.21□□□□□ -1.1
CNN3-206ENST00000487539 CHRNA4P43681 627 aa8.2□□□□□ -1.1
CNN3-206ENST00000487539 C1orf229Q6ZS94 237 aaPredicted RBP8.2□□□□□ -1.1
CNN3-206ENST00000487539 IL27Q8NEV9 243 aa8.2□□□□□ -1.1
CNN3-206ENST00000487539 CABLES1Q8TDN4 633 aa8.2□□□□□ -1.1
CNN3-206ENST00000487539 GOLGA2P5Q9HBQ8 144 aa8.2□□□□□ -1.1
CNN3-206ENST00000487539 ATP1B4Q9UN42 357 aaPredicted RBP8.2□□□□□ -1.1
CNN3-206ENST00000487539 TTBK1Q5TCY1 1321 aaPredicted RBP8.2□□□□□ -1.1
CNN3-206ENST00000487539 ABCA10Q8WWZ4 1543 aa8.19□□□□□ -1.1
CNN3-206ENST00000487539 SPATA31D1Q6ZQQ2 1576 aa8.19□□□□□ -1.1
CNN3-206ENST00000487539 NUTM2BA6NNL0 878 aaPredicted RBP8.19□□□□□ -1.1
CNN3-206ENST00000487539 NUTM2EB1AL46 878 aaPredicted RBP8.19□□□□□ -1.1
CNN3-206ENST00000487539 H7C1W4 665 aa8.19□□□□□ -1.1
CNN3-206ENST00000487539 PTGIRP43119 386 aa8.19□□□□□ -1.1
CNN3-206ENST00000487539 HSPA2P54652 639 aa8.19□□□□□ -1.1
CNN3-206ENST00000487539 CSPP1Q1MSJ5 1256 aa8.19□□□□□ -1.1
CNN3-206ENST00000487539 FOXD4L6Q3SYB3 417 aaPredicted RBP8.19□□□□□ -1.1
CNN3-206ENST00000487539 NUTM2DQ5VT03 806 aaPredicted RBP8.19□□□□□ -1.1
CNN3-206ENST00000487539 FOXD4L3Q6VB84 417 aaPredicted RBP8.19□□□□□ -1.1
CNN3-206ENST00000487539 LINC00114Q6XXX2 140 aa8.19□□□□□ -1.1
CNN3-206ENST00000487539 NUTM2AQ8IVF1 878 aaPredicted RBP8.19□□□□□ -1.1
CNN3-206ENST00000487539 ADH1AP07327 375 aa8.18□□□□□ -1.1
CNN3-206ENST00000487539 INTS6LQ5JSJ4 861 aaKnown RBP8.18□□□□□ -1.1
CNN3-206ENST00000487539 KDF1Q8NAX2 398 aaPredicted RBP8.18□□□□□ -1.1
CNN3-206ENST00000487539 TMPRSS4Q9NRS4 437 aa8.18□□□□□ -1.1
CNN3-206ENST00000487539 TOP2BQ02880 1626 aa8.18□□□□□ -1.1
CNN3-206ENST00000487539 LILRB3O75022 631 aa8.17□□□□□ -1.1
CNN3-206ENST00000487539 PCMTD1Q96MG8 357 aaPredicted RBP8.17□□□□□ -1.1
CNN3-206ENST00000487539 GAS2L1Q99501 681 aaPredicted RBP8.17□□□□□ -1.1
CNN3-206ENST00000487539 ZFP64Q9NPA5 681 aa8.17□□□□□ -1.1
CNN3-206ENST00000487539 FHAD1B1AJZ9 1412 aa8.17□□□□□ -1.1
CNN3-206ENST00000487539 ASXL2Q76L83 1435 aa8.17□□□□□ -1.1
CNN3-206ENST00000487539 ADD1P35611 737 aaKnown RBP8.16□□□□□ -1.1
CNN3-206ENST00000487539 MAP2K3P46734 347 aa8.16□□□□□ -1.1
CNN3-206ENST00000487539 QPCTQ16769 361 aa8.16□□□□□ -1.1
CNN3-206ENST00000487539 ARTNQ5T4W7 220 aa8.16□□□□□ -1.1
CNN3-206ENST00000487539 EDARADDQ8WWZ3 215 aa8.16□□□□□ -1.1
CNN3-206ENST00000487539 SLC10A4Q96EP9 437 aa8.16□□□□□ -1.1
CNN3-206ENST00000487539 CDV3Q9UKY7 258 aaKnown RBP8.16□□□□□ -1.1
CNN3-206ENST00000487539 GLI2P10070 1586 aa8.15□□□□□ -1.1
CNN3-206ENST00000487539 PTPRMP28827 1452 aa8.15□□□□□ -1.1
CNN3-206ENST00000487539 RNF144AP50876 292 aaPredicted RBP8.15□□□□□ -1.1
CNN3-206ENST00000487539 NBPF11Q86T75 865 aa8.15□□□□□ -1.1
CNN3-206ENST00000487539 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.15□□□□□ -1.1
CNN3-206ENST00000487539 HOXB4P17483 251 aaPredicted RBP8.14□□□□□ -1.11
CNN3-206ENST00000487539 ZNF784Q8NCA9 323 aaPredicted RBP8.14□□□□□ -1.11
CNN3-206ENST00000487539 HELBQ8NG08 1087 aaPredicted RBP8.14□□□□□ -1.11
CNN3-206ENST00000487539 GPKOWQ92917 476 aaPredicted RBP eCLIP8.14□□□□□ -1.11
CNN3-206ENST00000487539 KLRG1Q96E93 195 aa8.14□□□□□ -1.11
CNN3-206ENST00000487539 ARHGAP9Q9BRR9 750 aa8.14□□□□□ -1.11
CNN3-206ENST00000487539 DYRK1BQ9Y463 629 aa8.14□□□□□ -1.11
CNN3-206ENST00000487539 KIF21BO75037 1637 aa8.14□□□□□ -1.11
CNN3-206ENST00000487539 AMPD1P23109 780 aa8.13□□□□□ -1.11
CNN3-206ENST00000487539 PROCA1Q8NCQ7 364 aaPredicted RBP8.13□□□□□ -1.11
CNN3-206ENST00000487539 LILRA1O75019 489 aa8.12□□□□□ -1.11
CNN3-206ENST00000487539 PPP2R2DQ66LE6 453 aa8.12□□□□□ -1.11
CNN3-206ENST00000487539 PCF11O94913 1555 aaKnown RBP8.12□□□□□ -1.11
CNN3-206ENST00000487539 GNB5O14775 395 aa8.11□□□□□ -1.11
CNN3-206ENST00000487539 RAB15P59190 212 aa8.11□□□□□ -1.11
CNN3-206ENST00000487539 RTL5Q5HYW3 569 aaPredicted RBP8.11□□□□□ -1.11
CNN3-206ENST00000487539 KRTAP4-7Q9BYR0 210 aa8.11□□□□□ -1.11
CNN3-206ENST00000487539 RUSC2Q8N2Y8 1516 aa8.11□□□□□ -1.11
CNN3-206ENST00000487539 MAP3K4Q9Y6R4 1608 aa8.11□□□□□ -1.11
CNN3-206ENST00000487539 EPRSP07814 1512 aaKnown RBP8.1□□□□□ -1.11
CNN3-206ENST00000487539 PIK3R2O00459 728 aa8.1□□□□□ -1.11
CNN3-206ENST00000487539 ZBTB33Q86T24 672 aa8.1□□□□□ -1.11
CNN3-206ENST00000487539 GDF2Q9UK05 429 aaPredicted RBP8.1□□□□□ -1.11
CNN3-206ENST00000487539 PLB1Q6P1J6 1458 aa8.1□□□□□ -1.11
CNN3-206ENST00000487539 ABCC2Q92887 1545 aa8.09□□□□□ -1.11
CNN3-206ENST00000487539 ADAMTSL3P82987 1691 aa8.09□□□□□ -1.11
CNN3-206ENST00000487539 GATA4P43694 442 aa8.09□□□□□ -1.11
CNN3-206ENST00000487539 POU4F2Q12837 409 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms