RNA–Protein interactions for RNA: ENST00000487507.1

SGIP1-212, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 2

Gene SGIP1, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-212ENST00000487507 PIM2Q9P1W9 311 aa17.72■□□□□ 0.43
SGIP1-212ENST00000487507 PCDH11XQ9BZA7 1347 aa17.72■□□□□ 0.43
SGIP1-212ENST00000487507 PCDH11YQ9BZA8 1340 aa17.72■□□□□ 0.43
SGIP1-212ENST00000487507 LOC102724428A0A0B4J2F2 783 aa17.71■□□□□ 0.43
SGIP1-212ENST00000487507 SIK1P57059 783 aa17.71■□□□□ 0.43
SGIP1-212ENST00000487507 TMF1P82094 1093 aa17.71■□□□□ 0.43
SGIP1-212ENST00000487507 RASSF7Q02833 373 aa17.71■□□□□ 0.43
SGIP1-212ENST00000487507 ITPK1Q13572 414 aa17.71■□□□□ 0.43
SGIP1-212ENST00000487507 DALRD3Q5D0E6 543 aaKnown RBP17.71■□□□□ 0.43
SGIP1-212ENST00000487507 HDGFL2Q7Z4V5 671 aaPredicted RBP17.71■□□□□ 0.43
SGIP1-212ENST00000487507 PIGBQ92521 554 aa17.71■□□□□ 0.43
SGIP1-212ENST00000487507 VEGFAP15692 232 aaPredicted RBP17.7■□□□□ 0.42
SGIP1-212ENST00000487507 DCAF5Q96JK2 942 aa17.7■□□□□ 0.42
SGIP1-212ENST00000487507 PARP3Q9Y6F1 533 aa17.7■□□□□ 0.42
SGIP1-212ENST00000487507 EDC4Q6P2E9 1401 aaKnown RBP17.7■□□□□ 0.42
SGIP1-212ENST00000487507 ATP6V1AP38606 617 aa17.69■□□□□ 0.42
SGIP1-212ENST00000487507 PRDM10Q9NQV6 1147 aa17.69■□□□□ 0.42
SGIP1-212ENST00000487507 VIRMAQ69YN4 1812 aaKnown RBP17.68■□□□□ 0.42
SGIP1-212ENST00000487507 NLGN1Q8N2Q7 840 aa17.68■□□□□ 0.42
SGIP1-212ENST00000487507 AIDAQ96BJ3 306 aa17.68■□□□□ 0.42
SGIP1-212ENST00000487507 ABHD8Q96I13 439 aa17.68■□□□□ 0.42
SGIP1-212ENST00000487507 SLC12A5Q9H2X9 1139 aa17.68■□□□□ 0.42
SGIP1-212ENST00000487507 CGNL1Q0VF96 1302 aa17.68■□□□□ 0.42
SGIP1-212ENST00000487507 CYP27B1O15528 508 aa17.67■□□□□ 0.42
SGIP1-212ENST00000487507 CHRNA5P30532 468 aa17.67■□□□□ 0.42
SGIP1-212ENST00000487507 MLLT1Q03111 559 aaPredicted RBP17.67■□□□□ 0.42
SGIP1-212ENST00000487507 TRAPPC3LQ5T215 181 aa17.67■□□□□ 0.42
SGIP1-212ENST00000487507 CTCFP49711 727 aaPredicted RBP17.66■□□□□ 0.42
SGIP1-212ENST00000487507 LBX1P52954 281 aa17.66■□□□□ 0.42
SGIP1-212ENST00000487507 COL5A3P25940 1745 aaPredicted RBP17.66■□□□□ 0.42
SGIP1-212ENST00000487507 A0A1W2PP64 1363 aa17.66■□□□□ 0.42
SGIP1-212ENST00000487507 GLTPD2A6NH11 291 aa17.65■□□□□ 0.42
SGIP1-212ENST00000487507 ASAP1Q9ULH1 1129 aa17.65■□□□□ 0.42
SGIP1-212ENST00000487507 RTCBQ9Y3I0 505 aaKnown RBP17.65■□□□□ 0.42
SGIP1-212ENST00000487507 MYH14Q7Z406 1995 aaKnown RBP17.64■□□□□ 0.41
SGIP1-212ENST00000487507 CCDC85CA6NKD9 419 aa17.64■□□□□ 0.41
SGIP1-212ENST00000487507 GYS1P13807 737 aa17.64■□□□□ 0.41
SGIP1-212ENST00000487507 RRS1Q15050 365 aaKnown RBP17.64■□□□□ 0.41
SGIP1-212ENST00000487507 CREBZFQ9NS37 354 aa17.64■□□□□ 0.41
SGIP1-212ENST00000487507 SMG6Q86US8 1419 aaKnown RBP17.64■□□□□ 0.41
SGIP1-212ENST00000487507 ARHGEF1Q92888 912 aaKnown RBP17.63■□□□□ 0.41
SGIP1-212ENST00000487507 COG3Q96JB2 828 aa17.63■□□□□ 0.41
SGIP1-212ENST00000487507 RFC4P35249 363 aa17.62■□□□□ 0.41
SGIP1-212ENST00000487507 TMOD3Q9NYL9 352 aa17.62■□□□□ 0.41
SGIP1-212ENST00000487507 ROCK2O75116 1388 aaKnown RBP17.62■□□□□ 0.41
SGIP1-212ENST00000487507 DICER1Q9UPY3 1922 aaKnown RBP17.62■□□□□ 0.41
SGIP1-212ENST00000487507 TERF2IPQ9NYB0 399 aa17.61■□□□□ 0.41
SGIP1-212ENST00000487507 AFDNP55196 1824 aaKnown RBP17.61■□□□□ 0.41
SGIP1-212ENST00000487507 CNTNAP1P78357 1384 aa17.6■□□□□ 0.41
SGIP1-212ENST00000487507 DLEC1Q9Y238 1755 aa17.6■□□□□ 0.41
SGIP1-212ENST00000487507 POTECB2RU33 542 aa17.59■□□□□ 0.41
SGIP1-212ENST00000487507 LMNB1P20700 586 aa17.59■□□□□ 0.41
SGIP1-212ENST00000487507 CFAP44Q96MT7 982 aa17.59■□□□□ 0.41
SGIP1-212ENST00000487507 KDM6AO15550 1401 aaPredicted RBP17.58■□□□□ 0.41
SGIP1-212ENST00000487507 RTL1A6NKG5 1358 aa17.58■□□□□ 0.4
SGIP1-212ENST00000487507 ZC3H4Q9UPT8 1303 aaKnown RBP17.58■□□□□ 0.4
SGIP1-212ENST00000487507 POTEIP0CG38 1075 aa17.58■□□□□ 0.4
SGIP1-212ENST00000487507 POTEJP0CG39 1038 aa17.58■□□□□ 0.4
SGIP1-212ENST00000487507 CACNA1SQ13698 1873 aa17.57■□□□□ 0.4
SGIP1-212ENST00000487507 VEGFBP49765 207 aa17.57■□□□□ 0.4
SGIP1-212ENST00000487507 CHADLQ6NUI6 762 aa17.57■□□□□ 0.4
SGIP1-212ENST00000487507 RBM42Q9BTD8 480 aaKnown RBP17.57■□□□□ 0.4
SGIP1-212ENST00000487507 SRP68Q9UHB9 627 aaKnown RBP17.57■□□□□ 0.4
SGIP1-212ENST00000487507 DDR1Q08345 913 aa17.56■□□□□ 0.4
SGIP1-212ENST00000487507 ATG3Q9NT62 314 aa17.56■□□□□ 0.4
SGIP1-212ENST00000487507 HSPA8P11142 646 aaKnown RBP17.55■□□□□ 0.4
SGIP1-212ENST00000487507 HSP90AB2PQ58FF8 381 aa17.55■□□□□ 0.4
SGIP1-212ENST00000487507 L3MBTL2Q969R5 705 aa17.55■□□□□ 0.4
SGIP1-212ENST00000487507 FKBP8Q14318 412 aa17.54■□□□□ 0.4
SGIP1-212ENST00000487507 WBP1LQ9NX94 342 aa17.54■□□□□ 0.4
SGIP1-212ENST00000487507 ZNF831Q5JPB2 1677 aa17.54■□□□□ 0.4
SGIP1-212ENST00000487507 ADRA2BP18089 450 aa17.53■□□□□ 0.4
SGIP1-212ENST00000487507 DPY19L2Q6NUT2 758 aa17.53■□□□□ 0.4
SGIP1-212ENST00000487507 SLC4A9Q96Q91 983 aa17.53■□□□□ 0.4
SGIP1-212ENST00000487507 KDRP35968 1356 aa17.53■□□□□ 0.4
SGIP1-212ENST00000487507 KIF20BQ96Q89 1820 aa17.52■□□□□ 0.4
SGIP1-212ENST00000487507 TNRC18O15417 2968 aaPredicted RBP17.52■□□□□ 0.4
SGIP1-212ENST00000487507 RPS6KA4O75676 772 aa17.52■□□□□ 0.4
SGIP1-212ENST00000487507 NKX1-1Q15270 411 aaPredicted RBP17.51■□□□□ 0.39
SGIP1-212ENST00000487507 SPG7Q9UQ90 795 aa17.51■□□□□ 0.39
SGIP1-212ENST00000487507 FER1L6Q2WGJ9 1857 aa17.5■□□□□ 0.39
SGIP1-212ENST00000487507 PDE4DIPQ5VU43 2346 aa17.49■□□□□ 0.39
SGIP1-212ENST00000487507 NFKBIEO00221 500 aa17.49■□□□□ 0.39
SGIP1-212ENST00000487507 RGS19P49795 217 aa17.49■□□□□ 0.39
SGIP1-212ENST00000487507 GGNBP2Q9H3C7 697 aa17.49■□□□□ 0.39
SGIP1-212ENST00000487507 ZNF219Q9P2Y4 722 aaPredicted RBP17.49■□□□□ 0.39
SGIP1-212ENST00000487507 INSRP06213 1382 aa17.49■□□□□ 0.39
SGIP1-212ENST00000487507 CNTNAP4Q9C0A0 1308 aa17.48■□□□□ 0.39
SGIP1-212ENST00000487507 RC3H1Q5TC82 1133 aaKnown RBP17.48■□□□□ 0.39
SGIP1-212ENST00000487507 CASP8AP2Q9UKL3 1982 aa17.48■□□□□ 0.39
SGIP1-212ENST00000487507 TMEM88BA6NKF7 163 aa17.47■□□□□ 0.39
SGIP1-212ENST00000487507 POLRMTO00411 1230 aaKnown RBP17.47■□□□□ 0.39
SGIP1-212ENST00000487507 SCN4AP35499 1836 aa17.47■□□□□ 0.39
SGIP1-212ENST00000487507 USP42Q9H9J4 1324 aaKnown RBP17.47■□□□□ 0.39
SGIP1-212ENST00000487507 DDNO94850 711 aaPredicted RBP17.46■□□□□ 0.39
SGIP1-212ENST00000487507 ERFEQ4G0M1 354 aa17.46■□□□□ 0.39
SGIP1-212ENST00000487507 TJP1Q07157 1748 aa17.46■□□□□ 0.39
SGIP1-212ENST00000487507 PASKQ96RG2 1323 aa17.46■□□□□ 0.38
SGIP1-212ENST00000487507 ADAMTS7Q9UKP4 1686 aa17.45■□□□□ 0.38
SGIP1-212ENST00000487507 FLT4P35916 1363 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms