RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 FHDC1Q9C0D6 1143 aaPredicted RBP15.42■□□□□ 0.06
SPEN-205ENST00000487496 TUBGCP6Q96RT7 1819 aa15.42■□□□□ 0.06
SPEN-205ENST00000487496 MTHFSDQ2M296 383 aaKnown RBP15.41■□□□□ 0.06
SPEN-205ENST00000487496 FLAD1Q8NFF5 587 aa15.41■□□□□ 0.06
SPEN-205ENST00000487496 CFAP53Q96M91 514 aa15.41■□□□□ 0.06
SPEN-205ENST00000487496 SYT17Q9BSW7 474 aa15.41■□□□□ 0.06
SPEN-205ENST00000487496 TAF1LQ8IZX4 1826 aa15.4■□□□□ 0.06
SPEN-205ENST00000487496 POLD1P28340 1107 aa15.4■□□□□ 0.06
SPEN-205ENST00000487496 AMIGO3Q86WK7 504 aa15.4■□□□□ 0.06
SPEN-205ENST00000487496 SLC4A9Q96Q91 983 aa15.4■□□□□ 0.06
SPEN-205ENST00000487496 RBM42Q9BTD8 480 aaKnown RBP15.4■□□□□ 0.06
SPEN-205ENST00000487496 LGR6Q9HBX8 967 aa15.4■□□□□ 0.06
SPEN-205ENST00000487496 C4BP0C0L5 1744 aa15.4■□□□□ 0.06
SPEN-205ENST00000487496 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.38■□□□□ 0.05
SPEN-205ENST00000487496 RNMTO43148 476 aaKnown RBP15.38■□□□□ 0.05
SPEN-205ENST00000487496 SMIM5Q71RC9 77 aa15.38■□□□□ 0.05
SPEN-205ENST00000487496 PHF14O94880 888 aa15.37■□□□□ 0.05
SPEN-205ENST00000487496 SSFA2P28290 1259 aa15.37■□□□□ 0.05
SPEN-205ENST00000487496 MSL1Q68DK7 614 aa15.37■□□□□ 0.05
SPEN-205ENST00000487496 SLC52A2Q9HAB3 445 aa15.37■□□□□ 0.05
SPEN-205ENST00000487496 DCAF8L1A6NGE4 600 aa15.36■□□□□ 0.05
SPEN-205ENST00000487496 GNPATO15228 680 aa15.36■□□□□ 0.05
SPEN-205ENST00000487496 PTCD1O75127 700 aaKnown RBP15.36■□□□□ 0.05
SPEN-205ENST00000487496 NUDCQ9Y266 331 aa15.36■□□□□ 0.05
SPEN-205ENST00000487496 COL24A1Q17RW2 1714 aa15.36■□□□□ 0.05
SPEN-205ENST00000487496 MAP3K5Q99683 1374 aa15.36■□□□□ 0.05
SPEN-205ENST00000487496 GAS2L2Q8NHY3 880 aa15.35■□□□□ 0.05
SPEN-205ENST00000487496 RSPH6AQ9H0K4 717 aa15.35■□□□□ 0.05
SPEN-205ENST00000487496 SCN11AQ9UI33 1791 aa15.34■□□□□ 0.05
SPEN-205ENST00000487496 PRKAR2BP31323 418 aa15.34■□□□□ 0.05
SPEN-205ENST00000487496 RC3H1Q5TC82 1133 aaKnown RBP15.34■□□□□ 0.05
SPEN-205ENST00000487496 KLHL34Q8N239 644 aa15.34■□□□□ 0.05
SPEN-205ENST00000487496 PHACTR3Q96KR7 559 aa15.34■□□□□ 0.05
SPEN-205ENST00000487496 UBR3Q6ZT12 1888 aa15.33■□□□□ 0.05
SPEN-205ENST00000487496 ZNF831Q5JPB2 1677 aa15.33■□□□□ 0.04
SPEN-205ENST00000487496 U2AF1L5P0DN76 240 aaPredicted RBP15.33■□□□□ 0.04
SPEN-205ENST00000487496 U2AF1Q01081 240 aaKnown RBP eCLIP15.33■□□□□ 0.04
SPEN-205ENST00000487496 RTCBQ9Y3I0 505 aaKnown RBP15.33■□□□□ 0.04
SPEN-205ENST00000487496 CNTNAP4Q9C0A0 1308 aa15.33■□□□□ 0.04
SPEN-205ENST00000487496 MRC1P22897 1456 aa15.33■□□□□ 0.04
SPEN-205ENST00000487496 GNAT3A8MTJ3 354 aa15.32■□□□□ 0.04
SPEN-205ENST00000487496 SLC39A6Q13433 755 aa15.32■□□□□ 0.04
SPEN-205ENST00000487496 TRAPPC3LQ5T215 181 aa15.32■□□□□ 0.04
SPEN-205ENST00000487496 IL17REQ8NFR9 667 aa15.32■□□□□ 0.04
SPEN-205ENST00000487496 RPS6KA4O75676 772 aa15.31■□□□□ 0.04
SPEN-205ENST00000487496 FCHSD2O94868 740 aa15.31■□□□□ 0.04
SPEN-205ENST00000487496 DDX10Q13206 875 aaKnown RBP15.31■□□□□ 0.04
SPEN-205ENST00000487496 ADAMTS7Q9UKP4 1686 aa15.31■□□□□ 0.04
SPEN-205ENST00000487496 ADRA2BP18089 450 aa15.29■□□□□ 0.04
SPEN-205ENST00000487496 CRKLP46109 303 aaKnown RBP15.29■□□□□ 0.04
SPEN-205ENST00000487496 TEFQ10587 303 aa15.29■□□□□ 0.04
SPEN-205ENST00000487496 DNAJC10Q8IXB1 793 aa15.29■□□□□ 0.04
SPEN-205ENST00000487496 NLGN2Q8NFZ4 835 aa15.29■□□□□ 0.04
SPEN-205ENST00000487496 ARHGEF1Q92888 912 aaKnown RBP15.29■□□□□ 0.04
SPEN-205ENST00000487496 COL5A3P25940 1745 aaPredicted RBP15.29■□□□□ 0.04
SPEN-205ENST00000487496 RALBP1Q15311 655 aa15.28■□□□□ 0.04
SPEN-205ENST00000487496 RFC4P35249 363 aa15.27■□□□□ 0.04
SPEN-205ENST00000487496 INTS5Q6P9B9 1019 aaKnown RBP15.27■□□□□ 0.04
SPEN-205ENST00000487496 CD2APQ9Y5K6 639 aa15.27■□□□□ 0.04
SPEN-205ENST00000487496 CEMIPQ8WUJ3 1361 aa15.26■□□□□ 0.03
SPEN-205ENST00000487496 MYH14Q7Z406 1995 aaKnown RBP15.26■□□□□ 0.03
SPEN-205ENST00000487496 TTC5Q8N0Z6 440 aa15.26■□□□□ 0.03
SPEN-205ENST00000487496 VSIG10Q8N0Z9 540 aa15.26■□□□□ 0.03
SPEN-205ENST00000487496 NLGN1Q8N2Q7 840 aa15.26■□□□□ 0.03
SPEN-205ENST00000487496 KCPQ6ZWJ8 1503 aa15.26■□□□□ 0.03
SPEN-205ENST00000487496 TJP1Q07157 1748 aa15.26■□□□□ 0.03
SPEN-205ENST00000487496 CICQ96RK0 1608 aaPredicted RBP15.25■□□□□ 0.03
SPEN-205ENST00000487496 VIRMAQ69YN4 1812 aaKnown RBP15.25■□□□□ 0.03
SPEN-205ENST00000487496 MMP10P09238 476 aa15.25■□□□□ 0.03
SPEN-205ENST00000487496 CYP19A1P11511 503 aaPredicted RBP15.25■□□□□ 0.03
SPEN-205ENST00000487496 GYS1P13807 737 aa15.25■□□□□ 0.03
SPEN-205ENST00000487496 YY1P25490 414 aa15.25■□□□□ 0.03
SPEN-205ENST00000487496 GPR162Q16538 588 aa15.25■□□□□ 0.03
SPEN-205ENST00000487496 ZNF790Q6PG37 636 aa15.25■□□□□ 0.03
SPEN-205ENST00000487496 CCDC87Q9NVE4 849 aa15.25■□□□□ 0.03
SPEN-205ENST00000487496 RTF1Q92541 710 aaKnown RBP15.24■□□□□ 0.03
SPEN-205ENST00000487496 ZNF496Q96IT1 587 aaPredicted RBP15.24■□□□□ 0.03
SPEN-205ENST00000487496 BTBD11A6QL63 1104 aa15.23■□□□□ 0.03
SPEN-205ENST00000487496 HTATSF1O43719 755 aaKnown RBP15.23■□□□□ 0.03
SPEN-205ENST00000487496 MCM10Q7L590 875 aa15.23■□□□□ 0.03
SPEN-205ENST00000487496 PELP1Q8IZL8 1130 aaKnown RBP15.23■□□□□ 0.03
SPEN-205ENST00000487496 ZEB1P37275 1124 aaPredicted RBP15.22■□□□□ 0.03
SPEN-205ENST00000487496 DCTN1Q14203 1278 aa15.22■□□□□ 0.03
SPEN-205ENST00000487496 PLEKHF1Q96S99 279 aa15.22■□□□□ 0.03
SPEN-205ENST00000487496 SRP68Q9UHB9 627 aaKnown RBP15.22■□□□□ 0.03
SPEN-205ENST00000487496 ZBTB1Q9Y2K1 713 aa15.22■□□□□ 0.03
SPEN-205ENST00000487496 SOS1Q07889 1333 aaPredicted RBP15.21■□□□□ 0.03
SPEN-205ENST00000487496 USP42Q9H9J4 1324 aaKnown RBP15.21■□□□□ 0.03
SPEN-205ENST00000487496 KCNQ3O43525 872 aa15.21■□□□□ 0.03
SPEN-205ENST00000487496 STARD3NLO95772 234 aa15.21■□□□□ 0.03
SPEN-205ENST00000487496 NEFMP07197 916 aa15.21■□□□□ 0.03
SPEN-205ENST00000487496 HEG1Q9ULI3 1381 aa15.21■□□□□ 0.02
SPEN-205ENST00000487496 UBR2Q8IWV8 1755 aa15.21■□□□□ 0.02
SPEN-205ENST00000487496 YBX3P16989 372 aaKnown RBP eCLIP15.2■□□□□ 0.02
SPEN-205ENST00000487496 FKBP8Q14318 412 aa15.2■□□□□ 0.02
SPEN-205ENST00000487496 FMNL2Q96PY5 1086 aa15.2■□□□□ 0.02
SPEN-205ENST00000487496 TEX13AQ9BXU3 409 aaPredicted RBP15.2■□□□□ 0.02
SPEN-205ENST00000487496 SIPA1L3O60292 1781 aaPredicted RBP15.2■□□□□ 0.02
SPEN-205ENST00000487496 MYBBP1AQ9BQG0 1328 aaKnown RBP15.19■□□□□ 0.02
SPEN-205ENST00000487496 CANXP27824 592 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms