RNA–Protein interactions for RNA: ENST00000487251.5

LRRC1-203, Transcript of leucine rich repeat containing 1, humanhuman

TSL 2

Gene LRRC1, Length 2,527 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC1-203ENST00000487251 NCAPD2Q15021 1401 aa28.37■■■□□ 2.13
LRRC1-203ENST00000487251 PLEKHO1Q53GL0 409 aaPredicted RBP28.37■■■□□ 2.13
LRRC1-203ENST00000487251 ANKRD44Q8N8A2 993 aa28.37■■■□□ 2.13
LRRC1-203ENST00000487251 FKBP5Q13451 457 aaPredicted RBP28.36■■■□□ 2.13
LRRC1-203ENST00000487251 DAXXQ9UER7 740 aaPredicted RBP28.36■■■□□ 2.13
LRRC1-203ENST00000487251 CAMTA1Q9Y6Y1 1673 aa28.36■■■□□ 2.13
LRRC1-203ENST00000487251 AKAP4Q5JQC9 854 aa28.36■■■□□ 2.13
LRRC1-203ENST00000487251 TBC1D32Q96NH3 1257 aa28.35■■■□□ 2.13
LRRC1-203ENST00000487251 MFAP1P55081 439 aaKnown RBP28.35■■■□□ 2.13
LRRC1-203ENST00000487251 BABAM1Q9NWV8 329 aa28.35■■■□□ 2.13
LRRC1-203ENST00000487251 UPF2Q9HAU5 1272 aaKnown RBP28.34■■■□□ 2.13
LRRC1-203ENST00000487251 DCCP43146 1447 aa28.34■■■□□ 2.13
LRRC1-203ENST00000487251 DCTPP1Q9H773 170 aa28.34■■■□□ 2.13
LRRC1-203ENST00000487251 HDGFL1Q5TGJ6 251 aa28.33■■■□□ 2.13
LRRC1-203ENST00000487251 ERBB3P21860 1342 aa28.33■■■□□ 2.13
LRRC1-203ENST00000487251 EIF2S2P20042 333 aaKnown RBP28.32■■■□□ 2.12
LRRC1-203ENST00000487251 EIF4A1P60842 406 aaKnown RBP28.32■■■□□ 2.12
LRRC1-203ENST00000487251 TEFQ10587 303 aa28.32■■■□□ 2.12
LRRC1-203ENST00000487251 PHAXQ9H814 394 aaKnown RBP28.32■■■□□ 2.12
LRRC1-203ENST00000487251 CADPS2Q86UW7 1296 aa28.32■■■□□ 2.12
LRRC1-203ENST00000487251 CCT4P50991 539 aaKnown RBP28.31■■■□□ 2.12
LRRC1-203ENST00000487251 APBB1O00213 710 aa28.31■■■□□ 2.12
LRRC1-203ENST00000487251 RNMTO43148 476 aaKnown RBP28.3■■■□□ 2.12
LRRC1-203ENST00000487251 AMOTQ4VCS5 1084 aa28.3■■■□□ 2.12
LRRC1-203ENST00000487251 C1orf141Q5JVX7 400 aa28.3■■■□□ 2.12
LRRC1-203ENST00000487251 RPAP2Q8IXW5 612 aaPredicted RBP28.3■■■□□ 2.12
LRRC1-203ENST00000487251 C16orf71Q8IYS4 520 aaPredicted RBP28.3■■■□□ 2.12
LRRC1-203ENST00000487251 STRCQ7RTU9 1775 aa28.3■■■□□ 2.12
LRRC1-203ENST00000487251 BTBD11A6QL63 1104 aa28.29■■■□□ 2.12
LRRC1-203ENST00000487251 CHRNA2Q15822 529 aa28.29■■■□□ 2.12
LRRC1-203ENST00000487251 NPHP3Q7Z494 1330 aa28.28■■■□□ 2.12
LRRC1-203ENST00000487251 NCOA3Q9Y6Q9 1424 aa28.28■■■□□ 2.12
LRRC1-203ENST00000487251 COL18A1P39060 1754 aa28.28■■■□□ 2.12
LRRC1-203ENST00000487251 SMARCA5O60264 1052 aaPredicted RBP28.27■■■□□ 2.12
LRRC1-203ENST00000487251 BMP2KLQ5H9B9 411 aa28.27■■■□□ 2.12
LRRC1-203ENST00000487251 CRYBG1Q9Y4K1 1723 aa28.27■■■□□ 2.12
LRRC1-203ENST00000487251 NLRP2Q9NX02 1062 aa28.27■■■□□ 2.12
LRRC1-203ENST00000487251 TNS3Q68CZ2 1445 aa28.26■■■□□ 2.11
LRRC1-203ENST00000487251 KDM4FA0A1W2PPD8 638 aa28.26■■■□□ 2.11
LRRC1-203ENST00000487251 ANXA1P04083 346 aa28.26■■■□□ 2.11
LRRC1-203ENST00000487251 OTUD7AQ8TE49 926 aaPredicted RBP28.26■■■□□ 2.11
LRRC1-203ENST00000487251 SOS1Q07889 1333 aaPredicted RBP28.25■■■□□ 2.11
LRRC1-203ENST00000487251 C22orf23Q9BZE7 217 aa28.25■■■□□ 2.11
LRRC1-203ENST00000487251 CHPF2Q9P2E5 772 aa28.25■■■□□ 2.11
LRRC1-203ENST00000487251 N4BP2Q86UW6 1770 aaPredicted RBP28.24■■■□□ 2.11
LRRC1-203ENST00000487251 PLEKHM2Q8IWE5 1019 aa28.24■■■□□ 2.11
LRRC1-203ENST00000487251 LMTK3Q96Q04 1460 aa28.24■■■□□ 2.11
LRRC1-203ENST00000487251 SIPA1L3O60292 1781 aaPredicted RBP28.23■■■□□ 2.11
LRRC1-203ENST00000487251 GSPT1P15170 499 aaKnown RBP28.22■■■□□ 2.11
LRRC1-203ENST00000487251 PRAMEF22A3QJZ6 481 aa28.21■■■□□ 2.11
LRRC1-203ENST00000487251 GNAI2P04899 355 aa28.21■■■□□ 2.11
LRRC1-203ENST00000487251 SPATA31A3Q5VYP0 1347 aa28.21■■■□□ 2.11
LRRC1-203ENST00000487251 BRINP3Q76B58 766 aa28.21■■■□□ 2.11
LRRC1-203ENST00000487251 ZNF335Q9H4Z2 1342 aaPredicted RBP28.2■■■□□ 2.1
LRRC1-203ENST00000487251 CSB-PGBD3P0DP91 1061 aa28.19■■■□□ 2.1
LRRC1-203ENST00000487251 MEGF6O75095 1541 aa28.19■■■□□ 2.1
LRRC1-203ENST00000487251 RAPGEF4Q8WZA2 1011 aa28.19■■■□□ 2.1
LRRC1-203ENST00000487251 PNMA6EA0A0J9YXQ4 647 aa28.17■■■□□ 2.1
LRRC1-203ENST00000487251 TBC1D9Q6ZT07 1266 aa28.17■■■□□ 2.1
LRRC1-203ENST00000487251 USP44Q9H0E7 712 aa28.17■■■□□ 2.1
LRRC1-203ENST00000487251 EXOC6BQ9Y2D4 811 aa28.17■■■□□ 2.1
LRRC1-203ENST00000487251 LRRFIP2Q9Y608 721 aaKnown RBP28.17■■■□□ 2.1
LRRC1-203ENST00000487251 ADAMTS7Q9UKP4 1686 aa28.16■■■□□ 2.1
LRRC1-203ENST00000487251 PXDNLA1KZ92 1463 aa28.16■■■□□ 2.1
LRRC1-203ENST00000487251 HMMRO75330 724 aa28.16■■■□□ 2.1
LRRC1-203ENST00000487251 BECN1Q14457 450 aa28.16■■■□□ 2.1
LRRC1-203ENST00000487251 TBC1D2Q9BYX2 928 aa28.16■■■□□ 2.1
LRRC1-203ENST00000487251 FRAT2O75474 233 aaPredicted RBP28.15■■■□□ 2.1
LRRC1-203ENST00000487251 GNAI3P08754 354 aa28.15■■■□□ 2.1
LRRC1-203ENST00000487251 HOXB7P09629 217 aa28.15■■■□□ 2.1
LRRC1-203ENST00000487251 SCN11AQ9UI33 1791 aa28.15■■■□□ 2.1
LRRC1-203ENST00000487251 OVOS2A0A0G2JMS6 1433 aa28.15■■■□□ 2.1
LRRC1-203ENST00000487251 PI4KAP2A4QPH2 592 aa28.14■■■□□ 2.09
LRRC1-203ENST00000487251 PROSER3Q2NL68 480 aa28.14■■■□□ 2.09
LRRC1-203ENST00000487251 PI4KAP1Q8N8J0 262 aa28.14■■■□□ 2.09
LRRC1-203ENST00000487251 KDM6AO15550 1401 aaPredicted RBP28.13■■■□□ 2.09
LRRC1-203ENST00000487251 GIGYF1O75420 1035 aaPredicted RBP28.13■■■□□ 2.09
LRRC1-203ENST00000487251 TATP17735 454 aaPredicted RBP28.13■■■□□ 2.09
LRRC1-203ENST00000487251 SLC39A6Q13433 755 aa28.13■■■□□ 2.09
LRRC1-203ENST00000487251 TTC22Q5TAA0 569 aa28.13■■■□□ 2.09
LRRC1-203ENST00000487251 SLKQ9H2G2 1235 aaPredicted RBP28.11■■■□□ 2.09
LRRC1-203ENST00000487251 PHKG2P15735 406 aa28.11■■■□□ 2.09
LRRC1-203ENST00000487251 SRCIN1Q9C0H9 1055 aa28.1■■■□□ 2.09
LRRC1-203ENST00000487251 HEG1Q9ULI3 1381 aa28.1■■■□□ 2.09
LRRC1-203ENST00000487251 UBTFL1P0CB47 393 aaPredicted RBP28.1■■■□□ 2.09
LRRC1-203ENST00000487251 ATP8B2P98198 1209 aa28.1■■■□□ 2.09
LRRC1-203ENST00000487251 ADCY9O60503 1353 aa28.09■■■□□ 2.09
LRRC1-203ENST00000487251 DNAAF4Q8WXU2 420 aa28.09■■■□□ 2.09
LRRC1-203ENST00000487251 SLAIN2Q9P270 581 aa28.09■■■□□ 2.09
LRRC1-203ENST00000487251 C5P01031 1676 aa28.08■■■□□ 2.09
LRRC1-203ENST00000487251 CDC45O75419 566 aa28.08■■■□□ 2.08
LRRC1-203ENST00000487251 NFATC2IPQ8NCF5 419 aa28.08■■■□□ 2.08
LRRC1-203ENST00000487251 SPRYD3Q8NCJ5 442 aa28.08■■■□□ 2.08
LRRC1-203ENST00000487251 NBPF7P0C2Y1 421 aaPredicted RBP28.07■■■□□ 2.08
LRRC1-203ENST00000487251 BEND3Q5T5X7 828 aa28.07■■■□□ 2.08
LRRC1-203ENST00000487251 DBF4Q9UBU7 674 aaPredicted RBP28.07■■■□□ 2.08
LRRC1-203ENST00000487251 SPG7Q9UQ90 795 aa28.07■■■□□ 2.08
LRRC1-203ENST00000487251 RBM25P49756 843 aaKnown RBP28.06■■■□□ 2.08
LRRC1-203ENST00000487251 TSHZ3Q63HK5 1081 aa28.06■■■□□ 2.08
LRRC1-203ENST00000487251 SLC52A2Q9HAB3 445 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms