RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 NBPF4Q96M43 638 aa32.26■■■□□ 2.75
HLA-C-208ENST00000487245 PXDNLA1KZ92 1463 aa32.25■■■□□ 2.75
HLA-C-208ENST00000487245 TRAK2O60296 914 aa32.25■■■□□ 2.75
HLA-C-208ENST00000487245 N4BP2Q86UW6 1770 aaPredicted RBP32.25■■■□□ 2.75
HLA-C-208ENST00000487245 SLIT3O75094 1523 aa32.24■■■□□ 2.75
HLA-C-208ENST00000487245 RAB3GAP1Q15042 981 aa32.24■■■□□ 2.75
HLA-C-208ENST00000487245 HOXB7P09629 217 aa32.23■■■□□ 2.75
HLA-C-208ENST00000487245 PLEKHO1Q53GL0 409 aaPredicted RBP32.23■■■□□ 2.75
HLA-C-208ENST00000487245 MED1Q15648 1581 aaPredicted RBP32.22■■■□□ 2.75
HLA-C-208ENST00000487245 PTMSP20962 102 aa32.22■■■□□ 2.75
HLA-C-208ENST00000487245 AMOTQ4VCS5 1084 aa32.21■■■□□ 2.75
HLA-C-208ENST00000487245 C16orf71Q8IYS4 520 aaPredicted RBP32.21■■■□□ 2.75
HLA-C-208ENST00000487245 RTN4Q9NQC3 1192 aaKnown RBP32.21■■■□□ 2.75
HLA-C-208ENST00000487245 GCP02774 474 aa32.2■■■□□ 2.75
HLA-C-208ENST00000487245 AKAP4Q5JQC9 854 aa32.2■■■□□ 2.75
HLA-C-208ENST00000487245 ARHGEF25Q86VW2 580 aa32.2■■■□□ 2.75
HLA-C-208ENST00000487245 RABEP1Q15276 862 aa32.2■■■□□ 2.74
HLA-C-208ENST00000487245 HDGFL1Q5TGJ6 251 aa32.19■■■□□ 2.74
HLA-C-208ENST00000487245 CASC1Q6TDU7 716 aa32.19■■■□□ 2.74
HLA-C-208ENST00000487245 TNPO1Q92973 898 aaKnown RBP32.19■■■□□ 2.74
HLA-C-208ENST00000487245 NCAPD2Q15021 1401 aa32.19■■■□□ 2.74
HLA-C-208ENST00000487245 LMO7Q8WWI1 1683 aa32.19■■■□□ 2.74
HLA-C-208ENST00000487245 GOLGA6L3A6NEY3 463 aa32.18■■■□□ 2.74
HLA-C-208ENST00000487245 CD2BP2O95400 341 aaKnown RBP32.18■■■□□ 2.74
HLA-C-208ENST00000487245 FAM43AQ8N2R8 423 aa32.18■■■□□ 2.74
HLA-C-208ENST00000487245 GBP4Q96PP9 640 aa32.18■■■□□ 2.74
HLA-C-208ENST00000487245 ORAI2Q96SN7 254 aa32.18■■■□□ 2.74
HLA-C-208ENST00000487245 OSBPL3Q9H4L5 887 aa32.18■■■□□ 2.74
HLA-C-208ENST00000487245 ATP8B2P98198 1209 aa32.17■■■□□ 2.74
HLA-C-208ENST00000487245 USP26Q9BXU7 913 aa32.17■■■□□ 2.74
HLA-C-208ENST00000487245 ISY1Q9ULR0 285 aaKnown RBP32.17■■■□□ 2.74
HLA-C-208ENST00000487245 KIF1AQ12756 1690 aa32.16■■■□□ 2.74
HLA-C-208ENST00000487245 SMARCA5O60264 1052 aaPredicted RBP32.16■■■□□ 2.74
HLA-C-208ENST00000487245 PROSER2Q86WR7 435 aaPredicted RBP32.16■■■□□ 2.74
HLA-C-208ENST00000487245 ZBTB7CA1YPR0 619 aa32.15■■■□□ 2.74
HLA-C-208ENST00000487245 EIF4A1P60842 406 aaKnown RBP32.15■■■□□ 2.74
HLA-C-208ENST00000487245 NECTIN2Q92692 538 aa32.15■■■□□ 2.74
HLA-C-208ENST00000487245 KDM3BQ7LBC6 1761 aa32.14■■■□□ 2.74
HLA-C-208ENST00000487245 ZNF530Q6P9A1 599 aaPredicted RBP32.14■■■□□ 2.74
HLA-C-208ENST00000487245 OVOS2A0A0G2JMS6 1433 aa32.14■■■□□ 2.74
HLA-C-208ENST00000487245 SDSP20132 328 aa32.14■■■□□ 2.74
HLA-C-208ENST00000487245 CLEC17AQ6ZS10 378 aa32.14■■■□□ 2.74
HLA-C-208ENST00000487245 OTUD7AQ8TE49 926 aaPredicted RBP32.13■■■□□ 2.73
HLA-C-208ENST00000487245 RBM42Q9BTD8 480 aaKnown RBP32.13■■■□□ 2.73
HLA-C-208ENST00000487245 TRPM3Q9HCF6 1732 aaPredicted RBP32.13■■■□□ 2.73
HLA-C-208ENST00000487245 MST1RQ04912 1400 aa32.12■■■□□ 2.73
HLA-C-208ENST00000487245 TUBGCP6Q96RT7 1819 aa32.12■■■□□ 2.73
HLA-C-208ENST00000487245 TEFQ10587 303 aa32.12■■■□□ 2.73
HLA-C-208ENST00000487245 LGR6Q9HBX8 967 aa32.12■■■□□ 2.73
HLA-C-208ENST00000487245 RGPD2P0DJD1 1756 aa32.12■■■□□ 2.73
HLA-C-208ENST00000487245 SKOR2Q2VWA4 1001 aaPredicted RBP32.12■■■□□ 2.73
HLA-C-208ENST00000487245 KRT28Q7Z3Y7 464 aa32.12■■■□□ 2.73
HLA-C-208ENST00000487245 APBB1O00213 710 aa32.11■■■□□ 2.73
HLA-C-208ENST00000487245 HSP90AA1P07900 732 aaKnown RBP32.1■■■□□ 2.73
HLA-C-208ENST00000487245 LRRC59Q96AG4 307 aaKnown RBP32.1■■■□□ 2.73
HLA-C-208ENST00000487245 C19orf44Q9H6X5 657 aa32.1■■■□□ 2.73
HLA-C-208ENST00000487245 C1orf141Q5JVX7 400 aa32.1■■■□□ 2.73
HLA-C-208ENST00000487245 C1orf167Q5SNV9 1468 aa32.09■■■□□ 2.73
HLA-C-208ENST00000487245 XRCC6P12956 609 aaKnown RBP eCLIP32.09■■■□□ 2.73
HLA-C-208ENST00000487245 ANKRD24Q8TF21 1146 aa32.09■■■□□ 2.73
HLA-C-208ENST00000487245 LRRCC1Q9C099 1032 aa32.09■■■□□ 2.73
HLA-C-208ENST00000487245 CAMTA1Q9Y6Y1 1673 aa32.08■■■□□ 2.73
HLA-C-208ENST00000487245 PDE1AP54750 535 aa32.08■■■□□ 2.73
HLA-C-208ENST00000487245 BTBD11A6QL63 1104 aa32.07■■■□□ 2.72
HLA-C-208ENST00000487245 UBTFL1P0CB47 393 aaPredicted RBP32.07■■■□□ 2.72
HLA-C-208ENST00000487245 USP44Q9H0E7 712 aa32.07■■■□□ 2.72
HLA-C-208ENST00000487245 RNMTO43148 476 aaKnown RBP32.06■■■□□ 2.72
HLA-C-208ENST00000487245 REC8O95072 547 aa32.06■■■□□ 2.72
HLA-C-208ENST00000487245 MRE11P49959 708 aa32.06■■■□□ 2.72
HLA-C-208ENST00000487245 XPCQ01831 940 aaPredicted RBP32.06■■■□□ 2.72
HLA-C-208ENST00000487245 SRCIN1Q9C0H9 1055 aa32.06■■■□□ 2.72
HLA-C-208ENST00000487245 LMTK3Q96Q04 1460 aa32.05■■■□□ 2.72
HLA-C-208ENST00000487245 IBTKQ9P2D0 1353 aaPredicted RBP32.05■■■□□ 2.72
HLA-C-208ENST00000487245 LMOD2Q6P5Q4 547 aa32.05■■■□□ 2.72
HLA-C-208ENST00000487245 LRRFIP2Q9Y608 721 aaKnown RBP32.05■■■□□ 2.72
HLA-C-208ENST00000487245 SALL3Q9BXA9 1300 aa32.04■■■□□ 2.72
HLA-C-208ENST00000487245 GZF1Q9H116 711 aaPredicted RBP32.04■■■□□ 2.72
HLA-C-208ENST00000487245 PHAXQ9H814 394 aaKnown RBP32.04■■■□□ 2.72
HLA-C-208ENST00000487245 EXOC6BQ9Y2D4 811 aa32.03■■■□□ 2.72
HLA-C-208ENST00000487245 EIF2S2P20042 333 aaKnown RBP32.03■■■□□ 2.72
HLA-C-208ENST00000487245 PNMA6EA0A0J9YXQ4 647 aa32.02■■■□□ 2.72
HLA-C-208ENST00000487245 MPRIPQ6WCQ1 1025 aa32.01■■■□□ 2.72
HLA-C-208ENST00000487245 ERC2O15083 957 aa32.01■■■□□ 2.71
HLA-C-208ENST00000487245 SSH3Q8TE77 659 aa32■■■□□ 2.71
HLA-C-208ENST00000487245 RAB11FIP3O75154 756 aa31.99■■■□□ 2.71
HLA-C-208ENST00000487245 CHPF2Q9P2E5 772 aa31.99■■■□□ 2.71
HLA-C-208ENST00000487245 STAP2Q9UGK3 403 aa31.99■■■□□ 2.71
HLA-C-208ENST00000487245 DNAAF4Q8WXU2 420 aa31.99■■■□□ 2.71
HLA-C-208ENST00000487245 AOX1Q06278 1338 aa31.98■■■□□ 2.71
HLA-C-208ENST00000487245 MX1P20591 662 aa31.97■■■□□ 2.71
HLA-C-208ENST00000487245 NUCB2P80303 420 aa31.97■■■□□ 2.71
HLA-C-208ENST00000487245 DBF4Q9UBU7 674 aaPredicted RBP31.97■■■□□ 2.71
HLA-C-208ENST00000487245 ALS2Q96Q42 1657 aa31.97■■■□□ 2.71
HLA-C-208ENST00000487245 KCNQ3O43525 872 aa31.97■■■□□ 2.71
HLA-C-208ENST00000487245 SSFA2P28290 1259 aa31.97■■■□□ 2.71
HLA-C-208ENST00000487245 CWC22Q9HCG8 908 aaKnown RBP31.97■■■□□ 2.71
HLA-C-208ENST00000487245 FOXD4L1Q9NU39 408 aa31.97■■■□□ 2.71
HLA-C-208ENST00000487245 DCCP43146 1447 aa31.96■■■□□ 2.71
HLA-C-208ENST00000487245 ST18O60284 1047 aa31.96■■■□□ 2.71
HLA-C-208ENST00000487245 ATF3P18847 181 aa31.95■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms