RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 USP31Q70CQ4 1352 aa17.66■□□□□ 0.42
ATPAF1-205ENST00000487193 HSPA8P11142 646 aaKnown RBP17.65■□□□□ 0.42
ATPAF1-205ENST00000487193 PARP3Q9Y6F1 533 aa17.65■□□□□ 0.42
ATPAF1-205ENST00000487193 POTECB2RU33 542 aa17.64■□□□□ 0.41
ATPAF1-205ENST00000487193 FAM208AQ9UK61 1670 aaKnown RBP17.64■□□□□ 0.41
ATPAF1-205ENST00000487193 TRAPPC3LQ5T215 181 aa17.62■□□□□ 0.41
ATPAF1-205ENST00000487193 CHADLQ6NUI6 762 aa17.62■□□□□ 0.41
ATPAF1-205ENST00000487193 LOC102724428A0A0B4J2F2 783 aa17.61■□□□□ 0.41
ATPAF1-205ENST00000487193 CHRNA5P30532 468 aa17.61■□□□□ 0.41
ATPAF1-205ENST00000487193 SIK1P57059 783 aa17.61■□□□□ 0.41
ATPAF1-205ENST00000487193 USHBP1Q8N6Y0 703 aa17.61■□□□□ 0.41
ATPAF1-205ENST00000487193 ZC3H4Q9UPT8 1303 aaKnown RBP17.61■□□□□ 0.41
ATPAF1-205ENST00000487193 C4AP0C0L4 1744 aa17.61■□□□□ 0.41
ATPAF1-205ENST00000487193 ITGB4P16144 1822 aa17.61■□□□□ 0.41
ATPAF1-205ENST00000487193 ITPK1Q13572 414 aa17.6■□□□□ 0.41
ATPAF1-205ENST00000487193 PIGBQ92521 554 aa17.6■□□□□ 0.41
ATPAF1-205ENST00000487193 LMNB1P20700 586 aa17.59■□□□□ 0.41
ATPAF1-205ENST00000487193 ATP6V1AP38606 617 aa17.59■□□□□ 0.41
ATPAF1-205ENST00000487193 RAPGEF4Q8WZA2 1011 aa17.59■□□□□ 0.41
ATPAF1-205ENST00000487193 TNRC18O15417 2968 aaPredicted RBP17.59■□□□□ 0.41
ATPAF1-205ENST00000487193 VIRMAQ69YN4 1812 aaKnown RBP17.58■□□□□ 0.41
ATPAF1-205ENST00000487193 POTEIP0CG38 1075 aa17.58■□□□□ 0.4
ATPAF1-205ENST00000487193 POTEJP0CG39 1038 aa17.58■□□□□ 0.4
ATPAF1-205ENST00000487193 CCDC88AQ3V6T2 1871 aa17.58■□□□□ 0.4
ATPAF1-205ENST00000487193 GYS1P13807 737 aa17.57■□□□□ 0.4
ATPAF1-205ENST00000487193 TATP17735 454 aaPredicted RBP17.57■□□□□ 0.4
ATPAF1-205ENST00000487193 AMPHP49418 695 aa17.57■□□□□ 0.4
ATPAF1-205ENST00000487193 NBPF6Q5VWK0 638 aa17.57■□□□□ 0.4
ATPAF1-205ENST00000487193 DPY19L2Q6NUT2 758 aa17.57■□□□□ 0.4
ATPAF1-205ENST00000487193 ARHGEF1Q92888 912 aaKnown RBP17.57■□□□□ 0.4
ATPAF1-205ENST00000487193 NBPF4Q96M43 638 aa17.57■□□□□ 0.4
ATPAF1-205ENST00000487193 RTCBQ9Y3I0 505 aaKnown RBP17.57■□□□□ 0.4
ATPAF1-205ENST00000487193 MON2Q7Z3U7 1717 aa17.57■□□□□ 0.4
ATPAF1-205ENST00000487193 MAP2P11137 1827 aaKnown RBP17.56■□□□□ 0.4
ATPAF1-205ENST00000487193 HOXC9P31274 260 aa17.56■□□□□ 0.4
ATPAF1-205ENST00000487193 CGNL1Q0VF96 1302 aa17.55■□□□□ 0.4
ATPAF1-205ENST00000487193 PCDH11XQ9BZA7 1347 aa17.55■□□□□ 0.4
ATPAF1-205ENST00000487193 PCDH11YQ9BZA8 1340 aa17.55■□□□□ 0.4
ATPAF1-205ENST00000487193 FBLN1P23142 703 aa17.55■□□□□ 0.4
ATPAF1-205ENST00000487193 RFC4P35249 363 aa17.55■□□□□ 0.4
ATPAF1-205ENST00000487193 KDM6AO15550 1401 aaPredicted RBP17.55■□□□□ 0.4
ATPAF1-205ENST00000487193 TMEM88BA6NKF7 163 aa17.54■□□□□ 0.4
ATPAF1-205ENST00000487193 ASAP1Q9ULH1 1129 aa17.54■□□□□ 0.4
ATPAF1-205ENST00000487193 TIAM2Q8IVF5 1701 aa17.54■□□□□ 0.4
ATPAF1-205ENST00000487193 SBNO2Q9Y2G9 1366 aa17.53■□□□□ 0.4
ATPAF1-205ENST00000487193 CYP27B1O15528 508 aa17.53■□□□□ 0.4
ATPAF1-205ENST00000487193 MAP2K1Q02750 393 aaPredicted RBP17.53■□□□□ 0.4
ATPAF1-205ENST00000487193 MAP3K19Q56UN5 1328 aa17.51■□□□□ 0.39
ATPAF1-205ENST00000487193 DEFB115Q30KQ5 88 aa17.51■□□□□ 0.39
ATPAF1-205ENST00000487193 PASKQ96RG2 1323 aa17.5■□□□□ 0.39
ATPAF1-205ENST00000487193 TMC1Q8TDI8 760 aa17.5■□□□□ 0.39
ATPAF1-205ENST00000487193 WDR33Q9C0J8 1336 aaKnown RBP17.49■□□□□ 0.39
ATPAF1-205ENST00000487193 HDGFL2Q7Z4V5 671 aaPredicted RBP17.48■□□□□ 0.39
ATPAF1-205ENST00000487193 MCOLN1Q9GZU1 580 aa17.48■□□□□ 0.39
ATPAF1-205ENST00000487193 TMOD3Q9NYL9 352 aa17.48■□□□□ 0.39
ATPAF1-205ENST00000487193 CD163L1Q9NR16 1453 aa17.48■□□□□ 0.39
ATPAF1-205ENST00000487193 DDR1Q08345 913 aa17.47■□□□□ 0.39
ATPAF1-205ENST00000487193 BEGAINQ9BUH8 593 aa17.47■□□□□ 0.39
ATPAF1-205ENST00000487193 TSKSQ9UJT2 592 aa17.47■□□□□ 0.39
ATPAF1-205ENST00000487193 ADRA2BP18089 450 aa17.46■□□□□ 0.39
ATPAF1-205ENST00000487193 FKBP8Q14318 412 aa17.46■□□□□ 0.39
ATPAF1-205ENST00000487193 SRP68Q9UHB9 627 aaKnown RBP17.46■□□□□ 0.39
ATPAF1-205ENST00000487193 NFKBIEO00221 500 aa17.45■□□□□ 0.38
ATPAF1-205ENST00000487193 DDNO94850 711 aaPredicted RBP17.45■□□□□ 0.38
ATPAF1-205ENST00000487193 ERFEQ4G0M1 354 aa17.45■□□□□ 0.38
ATPAF1-205ENST00000487193 ATG3Q9NT62 314 aa17.45■□□□□ 0.38
ATPAF1-205ENST00000487193 PDE4DIPQ5VU43 2346 aa17.45■□□□□ 0.38
ATPAF1-205ENST00000487193 RASSF10A6NK89 507 aa17.44■□□□□ 0.38
ATPAF1-205ENST00000487193 RPS6KA4O75676 772 aa17.44■□□□□ 0.38
ATPAF1-205ENST00000487193 ITGBL1O95965 494 aaPredicted RBP17.44■□□□□ 0.38
ATPAF1-205ENST00000487193 RBM42Q9BTD8 480 aaKnown RBP17.44■□□□□ 0.38
ATPAF1-205ENST00000487193 SLC12A5Q9H2X9 1139 aa17.44■□□□□ 0.38
ATPAF1-205ENST00000487193 LDHDQ86WU2 507 aa17.43■□□□□ 0.38
ATPAF1-205ENST00000487193 EDC4Q6P2E9 1401 aaKnown RBP17.42■□□□□ 0.38
ATPAF1-205ENST00000487193 GRM1Q13255 1194 aa17.42■□□□□ 0.38
ATPAF1-205ENST00000487193 RRS1Q15050 365 aaKnown RBP17.42■□□□□ 0.38
ATPAF1-205ENST00000487193 RC3H1Q5TC82 1133 aaKnown RBP17.42■□□□□ 0.38
ATPAF1-205ENST00000487193 TTLL6Q8N841 843 aa17.42■□□□□ 0.38
ATPAF1-205ENST00000487193 COG3Q96JB2 828 aa17.42■□□□□ 0.38
ATPAF1-205ENST00000487193 ABT1Q9ULW3 272 aaKnown RBP17.42■□□□□ 0.38
ATPAF1-205ENST00000487193 CLEC11AQ9Y240 323 aa17.42■□□□□ 0.38
ATPAF1-205ENST00000487193 RAB3GAP2Q9H2M9 1393 aa17.41■□□□□ 0.38
ATPAF1-205ENST00000487193 NKX1-1Q15270 411 aaPredicted RBP17.41■□□□□ 0.38
ATPAF1-205ENST00000487193 EAPPQ56P03 285 aaPredicted RBP17.41■□□□□ 0.38
ATPAF1-205ENST00000487193 PRPF38BQ5VTL8 546 aaKnown RBP17.41■□□□□ 0.38
ATPAF1-205ENST00000487193 PAXIP1Q6ZW49 1069 aaPredicted RBP17.41■□□□□ 0.38
ATPAF1-205ENST00000487193 SLC4A9Q96Q91 983 aa17.41■□□□□ 0.38
ATPAF1-205ENST00000487193 ZNF219Q9P2Y4 722 aaPredicted RBP17.41■□□□□ 0.38
ATPAF1-205ENST00000487193 POLRMTO00411 1230 aaKnown RBP17.4■□□□□ 0.38
ATPAF1-205ENST00000487193 SMG6Q86US8 1419 aaKnown RBP17.39■□□□□ 0.38
ATPAF1-205ENST00000487193 DGKZQ13574 1117 aa17.39■□□□□ 0.37
ATPAF1-205ENST00000487193 SOX10P56693 466 aa17.38■□□□□ 0.37
ATPAF1-205ENST00000487193 TAF1DQ9H5J8 278 aaPredicted RBP17.38■□□□□ 0.37
ATPAF1-205ENST00000487193 TERF2IPQ9NYB0 399 aa17.38■□□□□ 0.37
ATPAF1-205ENST00000487193 DICER1Q9UPY3 1922 aaKnown RBP17.38■□□□□ 0.37
ATPAF1-205ENST00000487193 CASP8AP2Q9UKL3 1982 aa17.37■□□□□ 0.37
ATPAF1-205ENST00000487193 IQCA1LA6NCM1 817 aa17.37■□□□□ 0.37
ATPAF1-205ENST00000487193 TM4SF1P30408 202 aa17.37■□□□□ 0.37
ATPAF1-205ENST00000487193 GPR101Q96P66 508 aaPredicted RBP17.37■□□□□ 0.37
ATPAF1-205ENST00000487193 CNTNAP4Q9C0A0 1308 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms