RNA–Protein interactions for RNA: ENST00000487168.1

KRIT1-223, Transcript of KRIT1, ankyrin repeat containing, human

TSL 2

Gene KRIT1, Length 600 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KRIT1-223	ENST00000487168	HSP90AB1	P08238	724 aa	Known RBP	13.41	□□□□□ -0.26
KRIT1-223	ENST00000487168	TNNT2	P45379	298 aa	Predicted RBP	13.41	□□□□□ -0.26
KRIT1-223	ENST00000487168	KAT6B	Q8WYB5	2073 aa		13.4	□□□□□ -0.26
KRIT1-223	ENST00000487168	PAPPA	Q13219	1627 aa		13.4	□□□□□ -0.26
KRIT1-223	ENST00000487168	IL13	P35225	146 aa		13.4	□□□□□ -0.26
KRIT1-223	ENST00000487168	USHBP1	Q8N6Y0	703 aa		13.4	□□□□□ -0.26
KRIT1-223	ENST00000487168	LY75	O60449	1722 aa		13.39	□□□□□ -0.27
KRIT1-223	ENST00000487168	CYP27B1	O15528	508 aa		13.39	□□□□□ -0.27
KRIT1-223	ENST00000487168	KCNQ2	O43526	872 aa		13.39	□□□□□ -0.27
KRIT1-223	ENST00000487168	MTHFS	P49914	203 aa		13.39	□□□□□ -0.27
KRIT1-223	ENST00000487168	TXNRD1	Q16881	649 aa		13.39	□□□□□ -0.27
KRIT1-223	ENST00000487168	IFNL2	Q8IZJ0	200 aa		13.39	□□□□□ -0.27
KRIT1-223	ENST00000487168	COL3A1	P02461	1466 aa	Predicted RBP	13.38	□□□□□ -0.27
KRIT1-223	ENST00000487168	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.38	□□□□□ -0.27
KRIT1-223	ENST00000487168	QSER1	Q2KHR3	1735 aa		13.38	□□□□□ -0.27
KRIT1-223	ENST00000487168	GABBR2	O75899	941 aa		13.37	□□□□□ -0.27
KRIT1-223	ENST00000487168	PTF1A	Q7RTS3	328 aa		13.37	□□□□□ -0.27
KRIT1-223	ENST00000487168	SMARCC1	Q92922	1105 aa	Predicted RBP	13.37	□□□□□ -0.27
KRIT1-223	ENST00000487168	ERVV-2	B6SEH9	535 aa		13.36	□□□□□ -0.27
KRIT1-223	ENST00000487168	DIAPH1	O60610	1272 aa	Known RBP	13.36	□□□□□ -0.27
KRIT1-223	ENST00000487168	PHKG2	P15735	406 aa		13.36	□□□□□ -0.27
KRIT1-223	ENST00000487168	PRIM1	P49642	420 aa	Known RBP	13.36	□□□□□ -0.27
KRIT1-223	ENST00000487168	CC2D1B	Q5T0F9	858 aa	Known RBP	13.36	□□□□□ -0.27
KRIT1-223	ENST00000487168	DCAF5	Q96JK2	942 aa		13.36	□□□□□ -0.27
KRIT1-223	ENST00000487168	CFAP53	Q96M91	514 aa		13.36	□□□□□ -0.27
KRIT1-223	ENST00000487168	ZNF831	Q5JPB2	1677 aa		13.36	□□□□□ -0.27
KRIT1-223	ENST00000487168	TOGARAM1	Q9Y4F4	1720 aa		13.36	□□□□□ -0.27
KRIT1-223	ENST00000487168	R3HDM1	Q15032	1099 aa	Known RBP	13.35	□□□□□ -0.27
KRIT1-223	ENST00000487168	ACSBG1	Q96GR2	724 aa		13.35	□□□□□ -0.27
KRIT1-223	ENST00000487168	TSHZ2	Q9NRE2	1034 aa		13.35	□□□□□ -0.27
KRIT1-223	ENST00000487168	CASZ1	Q86V15	1759 aa		13.35	□□□□□ -0.27
KRIT1-223	ENST00000487168	ITGB4	P16144	1822 aa		13.34	□□□□□ -0.27
KRIT1-223	ENST00000487168	STK32B	Q9NY57	414 aa		13.34	□□□□□ -0.27
KRIT1-223	ENST00000487168	SLC15A2	Q16348	729 aa		13.33	□□□□□ -0.28
KRIT1-223	ENST00000487168	SULT6B1	Q6IMI4	303 aa		13.33	□□□□□ -0.28
KRIT1-223	ENST00000487168	ADAMTS7	Q9UKP4	1686 aa		13.32	□□□□□ -0.28
KRIT1-223	ENST00000487168	C1orf141	Q5JVX7	400 aa		13.32	□□□□□ -0.28
KRIT1-223	ENST00000487168	SYTL4	Q96C24	671 aa	Predicted RBP	13.32	□□□□□ -0.28
KRIT1-223	ENST00000487168	MRC1	P22897	1456 aa		13.31	□□□□□ -0.28
KRIT1-223	ENST00000487168	PSD	A5PKW4	1024 aa	Predicted RBP	13.31	□□□□□ -0.28
KRIT1-223	ENST00000487168	RALBP1	Q15311	655 aa		13.31	□□□□□ -0.28
KRIT1-223	ENST00000487168	SLC16A10	Q8TF71	515 aa		13.31	□□□□□ -0.28
KRIT1-223	ENST00000487168	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.31	□□□□□ -0.28
KRIT1-223	ENST00000487168	TMOD3	Q9NYL9	352 aa		13.31	□□□□□ -0.28
KRIT1-223	ENST00000487168	NUDC	Q9Y266	331 aa		13.31	□□□□□ -0.28
KRIT1-223	ENST00000487168	CIC	Q96RK0	1608 aa	Predicted RBP	13.31	□□□□□ -0.28
KRIT1-223	ENST00000487168	PALLD	Q8WX93	1383 aa		13.31	□□□□□ -0.28
KRIT1-223	ENST00000487168	PPP2R1A	P30153	589 aa		13.3	□□□□□ -0.28
KRIT1-223	ENST00000487168	AKAP4	Q5JQC9	854 aa		13.3	□□□□□ -0.28
KRIT1-223	ENST00000487168	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.3	□□□□□ -0.28
KRIT1-223	ENST00000487168	AEBP1	Q8IUX7	1158 aa		13.3	□□□□□ -0.28
KRIT1-223	ENST00000487168	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.3	□□□□□ -0.28
KRIT1-223	ENST00000487168	KDM6A	O15550	1401 aa	Predicted RBP	13.3	□□□□□ -0.28
KRIT1-223	ENST00000487168	C5	P01031	1676 aa		13.29	□□□□□ -0.28
KRIT1-223	ENST00000487168	CD44	P16070	742 aa	Known RBP	13.29	□□□□□ -0.28
KRIT1-223	ENST00000487168	TPRN	Q4KMQ1	711 aa		13.29	□□□□□ -0.28
KRIT1-223	ENST00000487168	FLAD1	Q8NFF5	587 aa		13.29	□□□□□ -0.28
KRIT1-223	ENST00000487168	PIGB	Q92521	554 aa		13.29	□□□□□ -0.28
KRIT1-223	ENST00000487168	SPON1	Q9HCB6	807 aa		13.29	□□□□□ -0.28
KRIT1-223	ENST00000487168	LRRC4B	Q9NT99	713 aa		13.29	□□□□□ -0.28
KRIT1-223	ENST00000487168	CCNL1	Q9UK58	526 aa	Predicted RBP	13.29	□□□□□ -0.28
KRIT1-223	ENST00000487168	SCN11A	Q9UI33	1791 aa		13.29	□□□□□ -0.28
KRIT1-223	ENST00000487168	COL24A1	Q17RW2	1714 aa		13.28	□□□□□ -0.28
KRIT1-223	ENST00000487168	MPRIP	Q6WCQ1	1025 aa		13.28	□□□□□ -0.28
KRIT1-223	ENST00000487168	HS6ST3	Q8IZP7	471 aa		13.28	□□□□□ -0.28
KRIT1-223	ENST00000487168	GAS2L2	Q8NHY3	880 aa		13.28	□□□□□ -0.28
KRIT1-223	ENST00000487168	TAF1L	Q8IZX4	1826 aa		13.27	□□□□□ -0.28
KRIT1-223	ENST00000487168	FCHSD2	O94868	740 aa		13.27	□□□□□ -0.29
KRIT1-223	ENST00000487168	GSE1	Q14687	1217 aa		13.27	□□□□□ -0.29
KRIT1-223	ENST00000487168	MTFR1L	Q9H019	292 aa		13.27	□□□□□ -0.29
KRIT1-223	ENST00000487168	MAP3K5	Q99683	1374 aa		13.25	□□□□□ -0.29
KRIT1-223	ENST00000487168	LOC102724428	A0A0B4J2F2	783 aa		13.25	□□□□□ -0.29
KRIT1-223	ENST00000487168	SIK1	P57059	783 aa		13.25	□□□□□ -0.29
KRIT1-223	ENST00000487168	C4B	P0C0L5	1744 aa		13.25	□□□□□ -0.29
KRIT1-223	ENST00000487168	ZNF827	Q17R98	1081 aa		13.24	□□□□□ -0.29
KRIT1-223	ENST00000487168	PNN	Q9H307	717 aa	Known RBP	13.24	□□□□□ -0.29
KRIT1-223	ENST00000487168	U2SURP	O15042	1029 aa	Known RBP	13.23	□□□□□ -0.29
KRIT1-223	ENST00000487168	CABP4	P57796	275 aa		13.23	□□□□□ -0.29
KRIT1-223	ENST00000487168	RSPH6A	Q9H0K4	717 aa		13.23	□□□□□ -0.29
KRIT1-223	ENST00000487168	ATG3	Q9NT62	314 aa		13.23	□□□□□ -0.29
KRIT1-223	ENST00000487168	TFCP2L1	Q9NZI6	479 aa		13.23	□□□□□ -0.29
KRIT1-223	ENST00000487168	TUBGCP6	Q96RT7	1819 aa		13.23	□□□□□ -0.29
KRIT1-223	ENST00000487168	CEMIP	Q8WUJ3	1361 aa		13.22	□□□□□ -0.29
KRIT1-223	ENST00000487168	PNPLA7	Q6ZV29	1317 aa		13.22	□□□□□ -0.29
KRIT1-223	ENST00000487168	HTATSF1	O43719	755 aa	Known RBP	13.22	□□□□□ -0.29
KRIT1-223	ENST00000487168	HMOX1	P09601	288 aa		13.22	□□□□□ -0.29
KRIT1-223	ENST00000487168	SSFA2	P28290	1259 aa		13.22	□□□□□ -0.29
KRIT1-223	ENST00000487168	RC3H1	Q5TC82	1133 aa	Known RBP	13.22	□□□□□ -0.29
KRIT1-223	ENST00000487168	SLC52A2	Q9HAB3	445 aa		13.22	□□□□□ -0.29
KRIT1-223	ENST00000487168	ASAP1	Q9ULH1	1129 aa		13.22	□□□□□ -0.29
KRIT1-223	ENST00000487168	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.21	□□□□□ -0.29
KRIT1-223	ENST00000487168	CNTNAP4	Q9C0A0	1308 aa		13.21	□□□□□ -0.29
KRIT1-223	ENST00000487168	GNAT3	A8MTJ3	354 aa		13.21	□□□□□ -0.29
KRIT1-223	ENST00000487168	MTHFSD	Q2M296	383 aa	Known RBP	13.21	□□□□□ -0.29
KRIT1-223	ENST00000487168	SGIP1	Q9BQI5	828 aa		13.21	□□□□□ -0.29
KRIT1-223	ENST00000487168	COL5A3	P25940	1745 aa	Predicted RBP	13.21	□□□□□ -0.3
KRIT1-223	ENST00000487168	UBR3	Q6ZT12	1888 aa		13.21	□□□□□ -0.3
KRIT1-223	ENST00000487168	RNMT	O43148	476 aa	Known RBP	13.2	□□□□□ -0.3
KRIT1-223	ENST00000487168	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.2	□□□□□ -0.3
KRIT1-223	ENST00000487168	PTGER2	P43116	358 aa		13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms