RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 LINC00116Q8NCU8 138 aa9.05□□□□□ -0.96
CTDSPL-208ENST00000486978 FLAD1Q8NFF5 587 aa9.05□□□□□ -0.96
CTDSPL-208ENST00000486978 ZCRB1Q8TBF4 217 aaKnown RBP9.05□□□□□ -0.96
CTDSPL-208ENST00000486978 ABHD8Q96I13 439 aa9.05□□□□□ -0.96
CTDSPL-208ENST00000486978 ZNF692Q9BU19 519 aaPredicted RBP9.05□□□□□ -0.96
CTDSPL-208ENST00000486978 TIMELESSQ9UNS1 1208 aa9.05□□□□□ -0.96
CTDSPL-208ENST00000486978 TTC21AQ8NDW8 1320 aa9.05□□□□□ -0.96
CTDSPL-208ENST00000486978 PALLDQ8WX93 1383 aa9.04□□□□□ -0.96
CTDSPL-208ENST00000486978 PRDM10Q9NQV6 1147 aa9.04□□□□□ -0.96
CTDSPL-208ENST00000486978 RNF181Q9P0P0 153 aa9.04□□□□□ -0.96
CTDSPL-208ENST00000486978 KDM2BQ8NHM5 1336 aa9.04□□□□□ -0.96
CTDSPL-208ENST00000486978 USP31Q70CQ4 1352 aa9.03□□□□□ -0.96
CTDSPL-208ENST00000486978 ST20-MTHFSA0A0A6YYL1 179 aa9.03□□□□□ -0.96
CTDSPL-208ENST00000486978 SLC24A1O60721 1099 aa9.03□□□□□ -0.96
CTDSPL-208ENST00000486978 TGFB2P61812 414 aa9.03□□□□□ -0.96
CTDSPL-208ENST00000486978 AK7Q96M32 723 aa9.03□□□□□ -0.96
CTDSPL-208ENST00000486978 PUS7Q96PZ0 661 aaKnown RBP9.03□□□□□ -0.96
CTDSPL-208ENST00000486978 TESK2Q96S53 571 aa9.03□□□□□ -0.96
CTDSPL-208ENST00000486978 KTN1Q86UP2 1357 aaKnown RBP9.02□□□□□ -0.97
CTDSPL-208ENST00000486978 PLEKHG2Q9H7P9 1386 aa9.02□□□□□ -0.97
CTDSPL-208ENST00000486978 RGS19P49795 217 aa9.02□□□□□ -0.97
CTDSPL-208ENST00000486978 LBX1P52954 281 aa9.02□□□□□ -0.97
CTDSPL-208ENST00000486978 RASSF7Q02833 373 aa9.02□□□□□ -0.97
CTDSPL-208ENST00000486978 ITPK1Q13572 414 aa9.02□□□□□ -0.97
CTDSPL-208ENST00000486978 MPRIPQ6WCQ1 1025 aa9.02□□□□□ -0.97
CTDSPL-208ENST00000486978 DCAF5Q96JK2 942 aa9.02□□□□□ -0.97
CTDSPL-208ENST00000486978 ZNF219Q9P2Y4 722 aaPredicted RBP9.02□□□□□ -0.97
CTDSPL-208ENST00000486978 C4AP0C0L4 1744 aa9.02□□□□□ -0.97
CTDSPL-208ENST00000486978 CD163L1Q9NR16 1453 aa9.02□□□□□ -0.97
CTDSPL-208ENST00000486978 POTEIP0CG38 1075 aa9.01□□□□□ -0.97
CTDSPL-208ENST00000486978 POTEJP0CG39 1038 aa9.01□□□□□ -0.97
CTDSPL-208ENST00000486978 MLLT1Q03111 559 aaPredicted RBP9.01□□□□□ -0.97
CTDSPL-208ENST00000486978 USHBP1Q8N6Y0 703 aa9.01□□□□□ -0.97
CTDSPL-208ENST00000486978 IP6K1Q92551 441 aa9.01□□□□□ -0.97
CTDSPL-208ENST00000486978 NSD3Q9BZ95 1437 aa9□□□□□ -0.97
CTDSPL-208ENST00000486978 SSFA2P28290 1259 aa9□□□□□ -0.97
CTDSPL-208ENST00000486978 HDGFL2Q7Z4V5 671 aaPredicted RBP9□□□□□ -0.97
CTDSPL-208ENST00000486978 CCER1Q8TC90 406 aaPredicted RBP9□□□□□ -0.97
CTDSPL-208ENST00000486978 TMC1Q8TDI8 760 aa9□□□□□ -0.97
CTDSPL-208ENST00000486978 TIAM2Q8IVF5 1701 aa9□□□□□ -0.97
CTDSPL-208ENST00000486978 EDC4Q6P2E9 1401 aaKnown RBP8.99□□□□□ -0.97
CTDSPL-208ENST00000486978 HSPA8P11142 646 aaKnown RBP8.99□□□□□ -0.97
CTDSPL-208ENST00000486978 VEGFAP15692 232 aaPredicted RBP8.99□□□□□ -0.97
CTDSPL-208ENST00000486978 CHRNA5P30532 468 aa8.99□□□□□ -0.97
CTDSPL-208ENST00000486978 CTCFP49711 727 aaPredicted RBP8.99□□□□□ -0.97
CTDSPL-208ENST00000486978 VEGFBP49765 207 aa8.99□□□□□ -0.97
CTDSPL-208ENST00000486978 NBPF6Q5VWK0 638 aa8.99□□□□□ -0.97
CTDSPL-208ENST00000486978 PIGBQ92521 554 aa8.99□□□□□ -0.97
CTDSPL-208ENST00000486978 NBPF4Q96M43 638 aa8.99□□□□□ -0.97
CTDSPL-208ENST00000486978 SLC12A5Q9H2X9 1139 aa8.99□□□□□ -0.97
CTDSPL-208ENST00000486978 TERF2IPQ9NYB0 399 aa8.99□□□□□ -0.97
CTDSPL-208ENST00000486978 MYH14Q7Z406 1995 aaKnown RBP8.99□□□□□ -0.97
CTDSPL-208ENST00000486978 A0A1W2PP64 1363 aa8.99□□□□□ -0.97
CTDSPL-208ENST00000486978 KDM6AO15550 1401 aaPredicted RBP8.98□□□□□ -0.97
CTDSPL-208ENST00000486978 GLTPD2A6NH11 291 aa8.98□□□□□ -0.97
CTDSPL-208ENST00000486978 CCDC85CA6NKD9 419 aa8.98□□□□□ -0.97
CTDSPL-208ENST00000486978 GNPATO15228 680 aa8.98□□□□□ -0.97
CTDSPL-208ENST00000486978 CYP27B1O15528 508 aa8.98□□□□□ -0.97
CTDSPL-208ENST00000486978 ABCB7O75027 752 aa8.98□□□□□ -0.97
CTDSPL-208ENST00000486978 DSG3P32926 999 aa8.98□□□□□ -0.97
CTDSPL-208ENST00000486978 TMF1P82094 1093 aa8.98□□□□□ -0.97
CTDSPL-208ENST00000486978 CNTNAP1P78357 1384 aa8.98□□□□□ -0.97
CTDSPL-208ENST00000486978 GYS1P13807 737 aa8.97□□□□□ -0.97
CTDSPL-208ENST00000486978 SLC4A9Q96Q91 983 aa8.97□□□□□ -0.97
CTDSPL-208ENST00000486978 CREBZFQ9NS37 354 aa8.97□□□□□ -0.97
CTDSPL-208ENST00000486978 WBP1LQ9NX94 342 aa8.97□□□□□ -0.97
CTDSPL-208ENST00000486978 PIM2Q9P1W9 311 aa8.97□□□□□ -0.97
CTDSPL-208ENST00000486978 LOC102724428A0A0B4J2F2 783 aa8.96□□□□□ -0.98
CTDSPL-208ENST00000486978 HOXC9P31274 260 aa8.96□□□□□ -0.98
CTDSPL-208ENST00000486978 SIK1P57059 783 aa8.96□□□□□ -0.98
CTDSPL-208ENST00000486978 CDCA8Q53HL2 280 aa8.96□□□□□ -0.98
CTDSPL-208ENST00000486978 DALRD3Q5D0E6 543 aaKnown RBP8.96□□□□□ -0.98
CTDSPL-208ENST00000486978 ARHGEF1Q92888 912 aaKnown RBP8.96□□□□□ -0.98
CTDSPL-208ENST00000486978 ASAP1Q9ULH1 1129 aa8.96□□□□□ -0.98
CTDSPL-208ENST00000486978 MAP3K19Q56UN5 1328 aa8.96□□□□□ -0.98
CTDSPL-208ENST00000486978 PDE4DIPQ5VU43 2346 aa8.96□□□□□ -0.98
CTDSPL-208ENST00000486978 CCDC87Q9NVE4 849 aa8.95□□□□□ -0.98
CTDSPL-208ENST00000486978 DICER1Q9UPY3 1922 aaKnown RBP8.95□□□□□ -0.98
CTDSPL-208ENST00000486978 COL5A3P25940 1745 aaPredicted RBP8.94□□□□□ -0.98
CTDSPL-208ENST00000486978 AFDNP55196 1824 aaKnown RBP8.94□□□□□ -0.98
CTDSPL-208ENST00000486978 DDR1Q08345 913 aa8.94□□□□□ -0.98
CTDSPL-208ENST00000486978 ATP6V1AP38606 617 aa8.93□□□□□ -0.98
CTDSPL-208ENST00000486978 NLGN1Q8N2Q7 840 aa8.93□□□□□ -0.98
CTDSPL-208ENST00000486978 SMARCC1Q92922 1105 aaPredicted RBP8.93□□□□□ -0.98
CTDSPL-208ENST00000486978 PASKQ96RG2 1323 aa8.93□□□□□ -0.98
CTDSPL-208ENST00000486978 CASP8AP2Q9UKL3 1982 aa8.93□□□□□ -0.98
CTDSPL-208ENST00000486978 NFKBIEO00221 500 aa8.92□□□□□ -0.98
CTDSPL-208ENST00000486978 TRAPPC3LQ5T215 181 aa8.92□□□□□ -0.98
CTDSPL-208ENST00000486978 CHADLQ6NUI6 762 aa8.92□□□□□ -0.98
CTDSPL-208ENST00000486978 AIDAQ96BJ3 306 aa8.92□□□□□ -0.98
CTDSPL-208ENST00000486978 ATG3Q9NT62 314 aa8.92□□□□□ -0.98
CTDSPL-208ENST00000486978 SRP68Q9UHB9 627 aaKnown RBP8.92□□□□□ -0.98
CTDSPL-208ENST00000486978 PARP3Q9Y6F1 533 aa8.92□□□□□ -0.98
CTDSPL-208ENST00000486978 DLEC1Q9Y238 1755 aa8.91□□□□□ -0.98
CTDSPL-208ENST00000486978 ADAMTS7Q9UKP4 1686 aa8.91□□□□□ -0.98
CTDSPL-208ENST00000486978 LMNB1P20700 586 aa8.91□□□□□ -0.98
CTDSPL-208ENST00000486978 EIF4G2P78344 907 aaKnown RBP eCLIP8.91□□□□□ -0.98
CTDSPL-208ENST00000486978 FKBP8Q14318 412 aa8.91□□□□□ -0.98
CTDSPL-208ENST00000486978 RRS1Q15050 365 aaKnown RBP8.91□□□□□ -0.98
CTDSPL-208ENST00000486978 COG3Q96JB2 828 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms