RNA–Protein interactions for RNA: ENST00000486902.5

PDE9A-223, Transcript of phosphodiesterase 9A, human

TSL 2

Gene PDE9A, Length 794 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE9A-223	ENST00000486902	KIAA1210	Q9ULL0	1709 aa		13.09	□□□□□ -0.31
PDE9A-223	ENST00000486902	CLEC11A	Q9Y240	323 aa		13.09	□□□□□ -0.31
PDE9A-223	ENST00000486902	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.08	□□□□□ -0.31
PDE9A-223	ENST00000486902	DPEP1	P16444	411 aa		13.08	□□□□□ -0.32
PDE9A-223	ENST00000486902	TGFB2	P61812	414 aa		13.08	□□□□□ -0.32
PDE9A-223	ENST00000486902	KIF13B	Q9NQT8	1826 aa		13.08	□□□□□ -0.32
PDE9A-223	ENST00000486902	FAM208A	Q9UK61	1670 aa	Known RBP	13.08	□□□□□ -0.32
PDE9A-223	ENST00000486902	NSD3	Q9BZ95	1437 aa		13.07	□□□□□ -0.32
PDE9A-223	ENST00000486902	SSFA2	P28290	1259 aa		13.07	□□□□□ -0.32
PDE9A-223	ENST00000486902	EVC2	Q86UK5	1308 aa		13.07	□□□□□ -0.32
PDE9A-223	ENST00000486902	PRDM10	Q9NQV6	1147 aa		13.06	□□□□□ -0.32
PDE9A-223	ENST00000486902	LINC00116	Q8NCU8	138 aa		13.05	□□□□□ -0.32
PDE9A-223	ENST00000486902	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.05	□□□□□ -0.32
PDE9A-223	ENST00000486902	IP6K1	Q92551	441 aa		13.05	□□□□□ -0.32
PDE9A-223	ENST00000486902	MKRN1	Q9UHC7	482 aa	Known RBP	13.05	□□□□□ -0.32
PDE9A-223	ENST00000486902	KCNA3	P22001	575 aa		13.04	□□□□□ -0.32
PDE9A-223	ENST00000486902	FXR2	P51116	673 aa	Known RBP eCLIP	13.04	□□□□□ -0.32
PDE9A-223	ENST00000486902	MPRIP	Q6WCQ1	1025 aa		13.04	□□□□□ -0.32
PDE9A-223	ENST00000486902	ABHD8	Q96I13	439 aa		13.04	□□□□□ -0.32
PDE9A-223	ENST00000486902	MON2	Q7Z3U7	1717 aa		13.04	□□□□□ -0.32
PDE9A-223	ENST00000486902	SBNO2	Q9Y2G9	1366 aa		13.04	□□□□□ -0.32
PDE9A-223	ENST00000486902	BRCA1	P38398	1863 aa	Known RBP	13.04	□□□□□ -0.32
PDE9A-223	ENST00000486902	DCAF5	Q96JK2	942 aa		13.03	□□□□□ -0.32
PDE9A-223	ENST00000486902	GNPAT	O15228	680 aa		13.02	□□□□□ -0.33
PDE9A-223	ENST00000486902	HMGB2	P26583	209 aa	Known RBP	13.02	□□□□□ -0.33
PDE9A-223	ENST00000486902	CTCF	P49711	727 aa	Predicted RBP	13.01	□□□□□ -0.33
PDE9A-223	ENST00000486902	MLLT1	Q03111	559 aa	Predicted RBP	13.01	□□□□□ -0.33
PDE9A-223	ENST00000486902	USHBP1	Q8N6Y0	703 aa		13.01	□□□□□ -0.33
PDE9A-223	ENST00000486902	ARFGEF1	Q9Y6D6	1849 aa		13.01	□□□□□ -0.33
PDE9A-223	ENST00000486902	RGPD2	P0DJD1	1756 aa		13	□□□□□ -0.33
PDE9A-223	ENST00000486902	CD163L1	Q9NR16	1453 aa		13	□□□□□ -0.33
PDE9A-223	ENST00000486902	RAB3GAP2	Q9H2M9	1393 aa		13	□□□□□ -0.33
PDE9A-223	ENST00000486902	VEGFA	P15692	232 aa	Predicted RBP	13	□□□□□ -0.33
PDE9A-223	ENST00000486902	SMARCC1	Q92922	1105 aa	Predicted RBP	13	□□□□□ -0.33
PDE9A-223	ENST00000486902	CCDC87	Q9NVE4	849 aa		13	□□□□□ -0.33
PDE9A-223	ENST00000486902	RASSF7	Q02833	373 aa		12.99	□□□□□ -0.33
PDE9A-223	ENST00000486902	ITPK1	Q13572	414 aa		12.99	□□□□□ -0.33
PDE9A-223	ENST00000486902	MAP3K19	Q56UN5	1328 aa		12.98	□□□□□ -0.33
PDE9A-223	ENST00000486902	LOC102724428	A0A0B4J2F2	783 aa		12.98	□□□□□ -0.33
PDE9A-223	ENST00000486902	HOXC9	P31274	260 aa		12.98	□□□□□ -0.33
PDE9A-223	ENST00000486902	LBX1	P52954	281 aa		12.98	□□□□□ -0.33
PDE9A-223	ENST00000486902	SIK1	P57059	783 aa		12.98	□□□□□ -0.33
PDE9A-223	ENST00000486902	DALRD3	Q5D0E6	543 aa	Known RBP	12.98	□□□□□ -0.33
PDE9A-223	ENST00000486902	PIGB	Q92521	554 aa		12.98	□□□□□ -0.33
PDE9A-223	ENST00000486902	CREBZF	Q9NS37	354 aa		12.98	□□□□□ -0.33
PDE9A-223	ENST00000486902	PIM2	Q9P1W9	311 aa		12.98	□□□□□ -0.33
PDE9A-223	ENST00000486902	C4A	P0C0L4	1744 aa		12.98	□□□□□ -0.33
PDE9A-223	ENST00000486902	MAP2	P11137	1827 aa	Known RBP	12.97	□□□□□ -0.33
PDE9A-223	ENST00000486902	CNTNAP1	P78357	1384 aa		12.97	□□□□□ -0.33
PDE9A-223	ENST00000486902	GLTPD2	A6NH11	291 aa		12.97	□□□□□ -0.33
PDE9A-223	ENST00000486902	TMF1	P82094	1093 aa		12.97	□□□□□ -0.33
PDE9A-223	ENST00000486902	NBPF6	Q5VWK0	638 aa		12.97	□□□□□ -0.33
PDE9A-223	ENST00000486902	AIDA	Q96BJ3	306 aa		12.97	□□□□□ -0.33
PDE9A-223	ENST00000486902	NBPF4	Q96M43	638 aa		12.97	□□□□□ -0.33
PDE9A-223	ENST00000486902	PCDH11X	Q9BZA7	1347 aa		12.96	□□□□□ -0.33
PDE9A-223	ENST00000486902	PCDH11Y	Q9BZA8	1340 aa		12.96	□□□□□ -0.33
PDE9A-223	ENST00000486902	ZC3H4	Q9UPT8	1303 aa	Known RBP	12.96	□□□□□ -0.33
PDE9A-223	ENST00000486902	SBF1	O95248	1867 aa		12.96	□□□□□ -0.33
PDE9A-223	ENST00000486902	CYP27B1	O15528	508 aa		12.96	□□□□□ -0.33
PDE9A-223	ENST00000486902	FBLN1	P23142	703 aa		12.96	□□□□□ -0.33
PDE9A-223	ENST00000486902	NLGN1	Q8N2Q7	840 aa		12.96	□□□□□ -0.33
PDE9A-223	ENST00000486902	RAPGEF4	Q8WZA2	1011 aa		12.96	□□□□□ -0.33
PDE9A-223	ENST00000486902	KDM6A	O15550	1401 aa	Predicted RBP	12.96	□□□□□ -0.34
PDE9A-223	ENST00000486902	CGNL1	Q0VF96	1302 aa		12.95	□□□□□ -0.34
PDE9A-223	ENST00000486902	CCDC85C	A6NKD9	419 aa		12.95	□□□□□ -0.34
PDE9A-223	ENST00000486902	POTEC	B2RU33	542 aa		12.95	□□□□□ -0.34
PDE9A-223	ENST00000486902	CHRNA5	P30532	468 aa		12.95	□□□□□ -0.34
PDE9A-223	ENST00000486902	AMPH	P49418	695 aa		12.95	□□□□□ -0.34
PDE9A-223	ENST00000486902	RGS19	P49795	217 aa		12.95	□□□□□ -0.34
PDE9A-223	ENST00000486902	EDC4	Q6P2E9	1401 aa	Known RBP	12.95	□□□□□ -0.34
PDE9A-223	ENST00000486902	GYS1	P13807	737 aa		12.94	□□□□□ -0.34
PDE9A-223	ENST00000486902	TAT	P17735	454 aa	Predicted RBP	12.94	□□□□□ -0.34
PDE9A-223	ENST00000486902	CCER1	Q8TC90	406 aa	Predicted RBP	12.94	□□□□□ -0.34
PDE9A-223	ENST00000486902	PARP3	Q9Y6F1	533 aa		12.94	□□□□□ -0.34
PDE9A-223	ENST00000486902	ITGB4	P16144	1822 aa		12.94	□□□□□ -0.34
PDE9A-223	ENST00000486902	HSPA8	P11142	646 aa	Known RBP	12.93	□□□□□ -0.34
PDE9A-223	ENST00000486902	VEGFB	P49765	207 aa		12.93	□□□□□ -0.34
PDE9A-223	ENST00000486902	WBP1L	Q9NX94	342 aa		12.93	□□□□□ -0.34
PDE9A-223	ENST00000486902	ASAP1	Q9ULH1	1129 aa		12.93	□□□□□ -0.34
PDE9A-223	ENST00000486902	POTEI	P0CG38	1075 aa		12.92	□□□□□ -0.34
PDE9A-223	ENST00000486902	POTEJ	P0CG39	1038 aa		12.92	□□□□□ -0.34
PDE9A-223	ENST00000486902	LMNB1	P20700	586 aa		12.92	□□□□□ -0.34
PDE9A-223	ENST00000486902	ATP6V1A	P38606	617 aa		12.92	□□□□□ -0.34
PDE9A-223	ENST00000486902	TRAPPC3L	Q5T215	181 aa		12.92	□□□□□ -0.34
PDE9A-223	ENST00000486902	ARHGEF1	Q92888	912 aa	Known RBP	12.92	□□□□□ -0.34
PDE9A-223	ENST00000486902	RTCB	Q9Y3I0	505 aa	Known RBP	12.92	□□□□□ -0.34
PDE9A-223	ENST00000486902	CHADL	Q6NUI6	762 aa		12.91	□□□□□ -0.34
PDE9A-223	ENST00000486902	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	12.91	□□□□□ -0.34
PDE9A-223	ENST00000486902	TMC1	Q8TDI8	760 aa		12.91	□□□□□ -0.34
PDE9A-223	ENST00000486902	SLC12A5	Q9H2X9	1139 aa		12.91	□□□□□ -0.34
PDE9A-223	ENST00000486902	DDR1	Q08345	913 aa		12.9	□□□□□ -0.34
PDE9A-223	ENST00000486902		A0A1W2PP64	1363 aa		12.9	□□□□□ -0.34
PDE9A-223	ENST00000486902	TIAM2	Q8IVF5	1701 aa		12.9	□□□□□ -0.34
PDE9A-223	ENST00000486902	SPDYE4	A6NLX3	237 aa		12.89	□□□□□ -0.35
PDE9A-223	ENST00000486902	PRKAR2A	P13861	404 aa	Known RBP	12.89	□□□□□ -0.35
PDE9A-223	ENST00000486902	RFC4	P35249	363 aa		12.88	□□□□□ -0.35
PDE9A-223	ENST00000486902	RRS1	Q15050	365 aa	Known RBP	12.88	□□□□□ -0.35
PDE9A-223	ENST00000486902	RTL1	A6NKG5	1358 aa		12.88	□□□□□ -0.35
PDE9A-223	ENST00000486902	KDR	P35968	1356 aa		12.88	□□□□□ -0.35
PDE9A-223	ENST00000486902	PRR29	P0C7W0	189 aa		12.87	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms