RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 FKBP5Q13451 457 aaPredicted RBP22.27■■□□□ 1.16
PDLIM7-207ENST00000486828 KCNH5Q8NCM2 988 aa22.27■■□□□ 1.16
PDLIM7-207ENST00000486828 N4BP2Q86UW6 1770 aaPredicted RBP22.27■■□□□ 1.15
PDLIM7-207ENST00000486828 PSME1Q06323 249 aa22.26■■□□□ 1.15
PDLIM7-207ENST00000486828 ESCO1Q5FWF5 840 aa22.26■■□□□ 1.15
PDLIM7-207ENST00000486828 CEMIPQ8WUJ3 1361 aa22.26■■□□□ 1.15
PDLIM7-207ENST00000486828 MCM4P33991 863 aa22.25■■□□□ 1.15
PDLIM7-207ENST00000486828 PXDNLA1KZ92 1463 aa22.25■■□□□ 1.15
PDLIM7-207ENST00000486828 DCCP43146 1447 aa22.25■■□□□ 1.15
PDLIM7-207ENST00000486828 GNAI3P08754 354 aa22.25■■□□□ 1.15
PDLIM7-207ENST00000486828 MED1Q15648 1581 aaPredicted RBP22.25■■□□□ 1.15
PDLIM7-207ENST00000486828 APBB1O00213 710 aa22.24■■□□□ 1.15
PDLIM7-207ENST00000486828 HSP90AB1P08238 724 aaKnown RBP22.24■■□□□ 1.15
PDLIM7-207ENST00000486828 ATF3P18847 181 aa22.23■■□□□ 1.15
PDLIM7-207ENST00000486828 SDSP20132 328 aa22.23■■□□□ 1.15
PDLIM7-207ENST00000486828 NBPF6Q5VWK0 638 aa22.23■■□□□ 1.15
PDLIM7-207ENST00000486828 NECTIN2Q92692 538 aa22.23■■□□□ 1.15
PDLIM7-207ENST00000486828 NBPF4Q96M43 638 aa22.23■■□□□ 1.15
PDLIM7-207ENST00000486828 OSBPL3Q9H4L5 887 aa22.22■■□□□ 1.15
PDLIM7-207ENST00000486828 CIZ1Q9ULV3 898 aaPredicted RBP22.22■■□□□ 1.15
PDLIM7-207ENST00000486828 CADPS2Q86UW7 1296 aa22.21■■□□□ 1.15
PDLIM7-207ENST00000486828 K7ELQ4 463 aaPredicted RBP22.21■■□□□ 1.15
PDLIM7-207ENST00000486828 CASC1Q6TDU7 716 aa22.21■■□□□ 1.15
PDLIM7-207ENST00000486828 CD2BP2O95400 341 aaKnown RBP22.2■■□□□ 1.14
PDLIM7-207ENST00000486828 HDGFL1Q5TGJ6 251 aa22.2■■□□□ 1.14
PDLIM7-207ENST00000486828 ATP8B2P98198 1209 aa22.19■■□□□ 1.14
PDLIM7-207ENST00000486828 RBM42Q9BTD8 480 aaKnown RBP22.19■■□□□ 1.14
PDLIM7-207ENST00000486828 USP26Q9BXU7 913 aa22.19■■□□□ 1.14
PDLIM7-207ENST00000486828 LMO7Q8WWI1 1683 aa22.19■■□□□ 1.14
PDLIM7-207ENST00000486828 KDM3BQ7LBC6 1761 aa22.19■■□□□ 1.14
PDLIM7-207ENST00000486828 SLIT3O75094 1523 aa22.19■■□□□ 1.14
PDLIM7-207ENST00000486828 PDE1AP54750 535 aa22.18■■□□□ 1.14
PDLIM7-207ENST00000486828 MST1RQ04912 1400 aa22.18■■□□□ 1.14
PDLIM7-207ENST00000486828 RGPD2P0DJD1 1756 aa22.18■■□□□ 1.14
PDLIM7-207ENST00000486828 RABEP1Q15276 862 aa22.18■■□□□ 1.14
PDLIM7-207ENST00000486828 HOXB7P09629 217 aa22.17■■□□□ 1.14
PDLIM7-207ENST00000486828 EIF4A1P60842 406 aaKnown RBP22.17■■□□□ 1.14
PDLIM7-207ENST00000486828 EXOC6BQ9Y2D4 811 aa22.17■■□□□ 1.14
PDLIM7-207ENST00000486828 C1orf167Q5SNV9 1468 aa22.17■■□□□ 1.14
PDLIM7-207ENST00000486828 NCAPD2Q15021 1401 aa22.16■■□□□ 1.14
PDLIM7-207ENST00000486828 ZBTB7CA1YPR0 619 aa22.16■■□□□ 1.14
PDLIM7-207ENST00000486828 AKAP4Q5JQC9 854 aa22.16■■□□□ 1.14
PDLIM7-207ENST00000486828 LRRCC1Q9C099 1032 aa22.16■■□□□ 1.14
PDLIM7-207ENST00000486828 LGR6Q9HBX8 967 aa22.16■■□□□ 1.14
PDLIM7-207ENST00000486828 SALL3Q9BXA9 1300 aa22.16■■□□□ 1.14
PDLIM7-207ENST00000486828 PNMA6EA0A0J9YXQ4 647 aa22.16■■□□□ 1.14
PDLIM7-207ENST00000486828 ORAI2Q96SN7 254 aa22.16■■□□□ 1.14
PDLIM7-207ENST00000486828 IBTKQ9P2D0 1353 aaPredicted RBP22.15■■□□□ 1.14
PDLIM7-207ENST00000486828 GCP02774 474 aa22.15■■□□□ 1.14
PDLIM7-207ENST00000486828 ARHGEF25Q86VW2 580 aa22.15■■□□□ 1.14
PDLIM7-207ENST00000486828 IL27Q8NEV9 243 aa22.15■■□□□ 1.14
PDLIM7-207ENST00000486828 LRRC59Q96AG4 307 aaKnown RBP22.15■■□□□ 1.14
PDLIM7-207ENST00000486828 CHMP4AQ9BY43 222 aa22.15■■□□□ 1.14
PDLIM7-207ENST00000486828 USP44Q9H0E7 712 aa22.15■■□□□ 1.14
PDLIM7-207ENST00000486828 PHAXQ9H814 394 aaKnown RBP22.15■■□□□ 1.14
PDLIM7-207ENST00000486828 DDX11L8A8MPP1 907 aa22.14■■□□□ 1.14
PDLIM7-207ENST00000486828 HSP90AA1P07900 732 aaKnown RBP22.14■■□□□ 1.14
PDLIM7-207ENST00000486828 PLEKHO1Q53GL0 409 aaPredicted RBP22.14■■□□□ 1.14
PDLIM7-207ENST00000486828 BRPF3Q9ULD4 1205 aa22.14■■□□□ 1.14
PDLIM7-207ENST00000486828 LRRFIP2Q9Y608 721 aaKnown RBP22.14■■□□□ 1.14
PDLIM7-207ENST00000486828 REC8O95072 547 aa22.13■■□□□ 1.13
PDLIM7-207ENST00000486828 UBTFL1P0CB47 393 aaPredicted RBP22.13■■□□□ 1.13
PDLIM7-207ENST00000486828 RAB3GAP1Q15042 981 aa22.13■■□□□ 1.13
PDLIM7-207ENST00000486828 AMOTQ4VCS5 1084 aa22.13■■□□□ 1.13
PDLIM7-207ENST00000486828 ZNF530Q6P9A1 599 aaPredicted RBP22.13■■□□□ 1.13
PDLIM7-207ENST00000486828 TRPM3Q9HCF6 1732 aaPredicted RBP22.12■■□□□ 1.13
PDLIM7-207ENST00000486828 ERC2O15083 957 aa22.12■■□□□ 1.13
PDLIM7-207ENST00000486828 TNPO1Q92973 898 aaKnown RBP22.12■■□□□ 1.13
PDLIM7-207ENST00000486828 SLAIN2Q9P270 581 aa22.12■■□□□ 1.13
PDLIM7-207ENST00000486828 TUBGCP6Q96RT7 1819 aa22.11■■□□□ 1.13
PDLIM7-207ENST00000486828 OVOS2A0A0G2JMS6 1433 aa22.11■■□□□ 1.13
PDLIM7-207ENST00000486828 TRAK2O60296 914 aa22.11■■□□□ 1.13
PDLIM7-207ENST00000486828 TEFQ10587 303 aa22.11■■□□□ 1.13
PDLIM7-207ENST00000486828 CAMTA1Q9Y6Y1 1673 aa22.11■■□□□ 1.13
PDLIM7-207ENST00000486828 EIF2S2P20042 333 aaKnown RBP22.1■■□□□ 1.13
PDLIM7-207ENST00000486828 MX1P20591 662 aa22.1■■□□□ 1.13
PDLIM7-207ENST00000486828 XPCQ01831 940 aaPredicted RBP22.1■■□□□ 1.13
PDLIM7-207ENST00000486828 SRCIN1Q9C0H9 1055 aa22.1■■□□□ 1.13
PDLIM7-207ENST00000486828 BTBD11A6QL63 1104 aa22.1■■□□□ 1.13
PDLIM7-207ENST00000486828 SSH3Q8TE77 659 aa22.09■■□□□ 1.13
PDLIM7-207ENST00000486828 GBP4Q96PP9 640 aa22.09■■□□□ 1.13
PDLIM7-207ENST00000486828 CHPF2Q9P2E5 772 aa22.09■■□□□ 1.13
PDLIM7-207ENST00000486828 PXDNQ92626 1479 aa22.09■■□□□ 1.13
PDLIM7-207ENST00000486828 KIF1AQ12756 1690 aa22.09■■□□□ 1.13
PDLIM7-207ENST00000486828 UBAP1LF5GYI3 381 aa22.08■■□□□ 1.13
PDLIM7-207ENST00000486828 RNMTO43148 476 aaKnown RBP22.08■■□□□ 1.13
PDLIM7-207ENST00000486828 KCNQ3O43525 872 aa22.08■■□□□ 1.13
PDLIM7-207ENST00000486828 L1TD1Q5T7N2 865 aaKnown RBP22.08■■□□□ 1.13
PDLIM7-207ENST00000486828 MPRIPQ6WCQ1 1025 aa22.08■■□□□ 1.13
PDLIM7-207ENST00000486828 ANKRD24Q8TF21 1146 aa22.08■■□□□ 1.13
PDLIM7-207ENST00000486828 FOXD4L1Q9NU39 408 aa22.08■■□□□ 1.13
PDLIM7-207ENST00000486828 STAP2Q9UGK3 403 aa22.08■■□□□ 1.13
PDLIM7-207ENST00000486828 C1orf141Q5JVX7 400 aa22.08■■□□□ 1.12
PDLIM7-207ENST00000486828 DNAAF4Q8WXU2 420 aa22.06■■□□□ 1.12
PDLIM7-207ENST00000486828 AOX1Q06278 1338 aa22.06■■□□□ 1.12
PDLIM7-207ENST00000486828 TOM1O60784 492 aa22.06■■□□□ 1.12
PDLIM7-207ENST00000486828 POLA2Q14181 598 aa22.06■■□□□ 1.12
PDLIM7-207ENST00000486828 BEND3Q5T5X7 828 aa22.06■■□□□ 1.12
PDLIM7-207ENST00000486828 TSHZ3Q63HK5 1081 aa22.06■■□□□ 1.12
PDLIM7-207ENST00000486828 LMOD2Q6P5Q4 547 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms