RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 PPFIA3O75145 1194 aa10.85□□□□□ -0.67
LTN1-206ENST00000486427 ATP1A2P50993 1020 aa10.85□□□□□ -0.67
LTN1-206ENST00000486427 TLR1Q15399 786 aa10.85□□□□□ -0.67
LTN1-206ENST00000486427 CCDC155Q8N6L0 562 aa10.85□□□□□ -0.67
LTN1-206ENST00000486427 TPCN2Q8NHX9 752 aa10.85□□□□□ -0.67
LTN1-206ENST00000486427 ZSCAN10Q96SZ4 725 aaPredicted RBP10.85□□□□□ -0.67
LTN1-206ENST00000486427 ZNF358Q9NW07 568 aa10.85□□□□□ -0.67
LTN1-206ENST00000486427 SPATA31C2B4DYI2 1134 aa10.84□□□□□ -0.67
LTN1-206ENST00000486427 H3BM21 787 aa10.84□□□□□ -0.67
LTN1-206ENST00000486427 DKK1O94907 266 aa10.84□□□□□ -0.67
LTN1-206ENST00000486427 RFX1P22670 979 aa10.84□□□□□ -0.67
LTN1-206ENST00000486427 LCE2AQ5TA79 106 aaPredicted RBP10.84□□□□□ -0.67
LTN1-206ENST00000486427 CCDC102BQ68D86 513 aa10.84□□□□□ -0.67
LTN1-206ENST00000486427 NBPF10Q6P3W6 841 aaKnown RBP10.84□□□□□ -0.67
LTN1-206ENST00000486427 NBPF15Q8N660 670 aa10.84□□□□□ -0.67
LTN1-206ENST00000486427 ZNF594Q96JF6 807 aaPredicted RBP10.84□□□□□ -0.67
LTN1-206ENST00000486427 SLC4A9Q96Q91 983 aa10.84□□□□□ -0.67
LTN1-206ENST00000486427 RASA1P20936 1047 aa10.83□□□□□ -0.68
LTN1-206ENST00000486427 SMTNP53814 917 aa10.83□□□□□ -0.68
LTN1-206ENST00000486427 CRTC2Q53ET0 693 aaPredicted RBP10.83□□□□□ -0.68
LTN1-206ENST00000486427 TREML4Q6UXN2 200 aa10.83□□□□□ -0.68
LTN1-206ENST00000486427 LARGE2Q8N3Y3 721 aa10.83□□□□□ -0.68
LTN1-206ENST00000486427 NPAS3Q8IXF0 933 aa10.82□□□□□ -0.68
LTN1-206ENST00000486427 VRTNQ9H8Y1 702 aa10.82□□□□□ -0.68
LTN1-206ENST00000486427 USP3Q9Y6I4 520 aa10.82□□□□□ -0.68
LTN1-206ENST00000486427 WFS1O76024 890 aa10.81□□□□□ -0.68
LTN1-206ENST00000486427 CDCA8Q53HL2 280 aa10.81□□□□□ -0.68
LTN1-206ENST00000486427 TMEM214Q6NUQ4 689 aaKnown RBP10.81□□□□□ -0.68
LTN1-206ENST00000486427 PPARGC1BQ86YN6 1023 aaKnown RBP10.81□□□□□ -0.68
LTN1-206ENST00000486427 SIX5Q8N196 739 aa10.81□□□□□ -0.68
LTN1-206ENST00000486427 A6NJY4 79 aa10.8□□□□□ -0.68
LTN1-206ENST00000486427 SFI1A8K8P3 1242 aa10.8□□□□□ -0.68
LTN1-206ENST00000486427 PHKA2P46019 1235 aa10.8□□□□□ -0.68
LTN1-206ENST00000486427 PTK7Q13308 1070 aa10.8□□□□□ -0.68
LTN1-206ENST00000486427 MTFR1Q15390 333 aa10.8□□□□□ -0.68
LTN1-206ENST00000486427 C4orf17Q53FE4 359 aa10.8□□□□□ -0.68
LTN1-206ENST00000486427 TAS1R3Q7RTX0 852 aa10.8□□□□□ -0.68
LTN1-206ENST00000486427 ERBB4Q15303 1308 aa10.8□□□□□ -0.68
LTN1-206ENST00000486427 EPHA4P54764 986 aa10.79□□□□□ -0.68
LTN1-206ENST00000486427 LARP1Q6PKG0 1096 aaKnown RBP10.79□□□□□ -0.68
LTN1-206ENST00000486427 CCDC82Q8N4S0 544 aa10.79□□□□□ -0.68
LTN1-206ENST00000486427 CCDC97Q96F63 343 aaPredicted RBP10.79□□□□□ -0.68
LTN1-206ENST00000486427 IQSEC3Q9UPP2 1182 aaPredicted RBP10.79□□□□□ -0.68
LTN1-206ENST00000486427 USP17L15C9J2P7 530 aa10.78□□□□□ -0.68
LTN1-206ENST00000486427 USP17L10C9JJH3 530 aa10.78□□□□□ -0.68
LTN1-206ENST00000486427 USP17L13C9JLJ4 530 aa10.78□□□□□ -0.68
LTN1-206ENST00000486427 USP17L12C9JPN9 530 aa10.78□□□□□ -0.68
LTN1-206ENST00000486427 USP17L11C9JVI0 530 aa10.78□□□□□ -0.68
LTN1-206ENST00000486427 USP17L21D6R901 530 aa10.78□□□□□ -0.68
LTN1-206ENST00000486427 USP17L18D6R9N7 530 aa10.78□□□□□ -0.68
LTN1-206ENST00000486427 USP17L22D6RA61 530 aa10.78□□□□□ -0.68
LTN1-206ENST00000486427 USP17L17D6RBQ6 530 aa10.78□□□□□ -0.68
LTN1-206ENST00000486427 USP17L19D6RCP7 530 aa10.78□□□□□ -0.68
LTN1-206ENST00000486427 USP17L20D6RJB6 530 aa10.78□□□□□ -0.68
LTN1-206ENST00000486427 BACH1O14867 736 aa10.78□□□□□ -0.68
LTN1-206ENST00000486427 SRPK2P78362 688 aaKnown RBP10.78□□□□□ -0.68
LTN1-206ENST00000486427 USP17L24Q0WX57 530 aa10.78□□□□□ -0.68
LTN1-206ENST00000486427 WDR44Q5JSH3 913 aa10.78□□□□□ -0.68
LTN1-206ENST00000486427 GNASQ5JWF2 1037 aa10.78□□□□□ -0.68
LTN1-206ENST00000486427 ERICH6Q7L0X2 663 aa10.78□□□□□ -0.68
LTN1-206ENST00000486427 TNS4Q8IZW8 715 aa10.78□□□□□ -0.68
LTN1-206ENST00000486427 ZNF295-AS1Q8N0V1 137 aa10.78□□□□□ -0.68
LTN1-206ENST00000486427 RHBDD1Q8TEB9 315 aa10.78□□□□□ -0.68
LTN1-206ENST00000486427 CUEDC1Q9NWM3 386 aaPredicted RBP10.78□□□□□ -0.68
LTN1-206ENST00000486427 SERPINA10Q9UK55 444 aa10.78□□□□□ -0.68
LTN1-206ENST00000486427 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.77□□□□□ -0.69
LTN1-206ENST00000486427 ITGA6P23229 1130 aa10.77□□□□□ -0.69
LTN1-206ENST00000486427 SLC16A10Q8TF71 515 aa10.77□□□□□ -0.69
LTN1-206ENST00000486427 TIMMDC1Q9NPL8 285 aa10.77□□□□□ -0.69
LTN1-206ENST00000486427 FAM196BA6NMK8 535 aa10.76□□□□□ -0.69
LTN1-206ENST00000486427 CDK2AP1O14519 115 aa10.76□□□□□ -0.69
LTN1-206ENST00000486427 GTF2E1P29083 439 aaPredicted RBP10.76□□□□□ -0.69
LTN1-206ENST00000486427 TSEN2Q8NCE0 465 aaKnown RBP10.76□□□□□ -0.69
LTN1-206ENST00000486427 SCHIP1Q9P0W5 487 aaPredicted RBP10.76□□□□□ -0.69
LTN1-206ENST00000486427 DYRK1BQ9Y463 629 aa10.76□□□□□ -0.69
LTN1-206ENST00000486427 FOXK2Q01167 660 aa10.75□□□□□ -0.69
LTN1-206ENST00000486427 DPYDQ12882 1025 aa10.75□□□□□ -0.69
LTN1-206ENST00000486427 TBCELQ5QJ74 424 aa10.75□□□□□ -0.69
LTN1-206ENST00000486427 ARXQ96QS3 562 aa10.75□□□□□ -0.69
LTN1-206ENST00000486427 SUPT5HO00267 1087 aaKnown RBP10.74□□□□□ -0.69
LTN1-206ENST00000486427 VSIG8P0DPA2 414 aa10.74□□□□□ -0.69
LTN1-206ENST00000486427 PLA2G4AP47712 749 aa10.74□□□□□ -0.69
LTN1-206ENST00000486427 ANKMY2Q8IV38 441 aa10.74□□□□□ -0.69
LTN1-206ENST00000486427 IRF7Q92985 503 aa10.74□□□□□ -0.69
LTN1-206ENST00000486427 GAS2L1Q99501 681 aaPredicted RBP10.74□□□□□ -0.69
LTN1-206ENST00000486427 M0R2N6 131 aa10.73□□□□□ -0.69
LTN1-206ENST00000486427 SEC13P55735 322 aa10.73□□□□□ -0.69
LTN1-206ENST00000486427 NIFKQ9BYG3 293 aaKnown RBP10.73□□□□□ -0.69
LTN1-206ENST00000486427 RIPOR1Q6ZS17 1223 aa10.72□□□□□ -0.69
LTN1-206ENST00000486427 SLC9A9Q8IVB4 645 aa10.72□□□□□ -0.69
LTN1-206ENST00000486427 VWA5B2Q8N398 1253 aa10.72□□□□□ -0.69
LTN1-206ENST00000486427 GPR161Q8N6U8 529 aaKnown RBP10.72□□□□□ -0.69
LTN1-206ENST00000486427 NANOS1Q8WY41 292 aaKnown RBP10.72□□□□□ -0.69
LTN1-206ENST00000486427 TSPAN10Q9H1Z9 355 aaPredicted RBP10.72□□□□□ -0.69
LTN1-206ENST00000486427 RBM19Q9Y4C8 960 aaKnown RBP10.72□□□□□ -0.69
LTN1-206ENST00000486427 A0A1B0GTH6 734 aa10.71□□□□□ -0.69
LTN1-206ENST00000486427 CDC14CA4D256 554 aa10.71□□□□□ -0.69
LTN1-206ENST00000486427 LGR5O75473 907 aa10.71□□□□□ -0.69
LTN1-206ENST00000486427 GMPRP36959 345 aa10.71□□□□□ -0.69
LTN1-206ENST00000486427 ZDHHC1Q8WTX9 485 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms