RNA–Protein interactions for RNA: ENST00000486361.5

LIMK1-206, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 569 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-206ENST00000486361 ATP6V1AP38606 617 aa26.34■■□□□ 1.81
LIMK1-206ENST00000486361 TFCP2L1Q9NZI6 479 aa26.34■■□□□ 1.81
LIMK1-206ENST00000486361 SCN11AQ9UI33 1791 aa26.33■■□□□ 1.81
LIMK1-206ENST00000486361 ITPK1Q13572 414 aa26.33■■□□□ 1.81
LIMK1-206ENST00000486361 SLC4A9Q96Q91 983 aa26.33■■□□□ 1.81
LIMK1-206ENST00000486361 PTCD1O75127 700 aaKnown RBP26.32■■□□□ 1.8
LIMK1-206ENST00000486361 ZBTB7AO95365 584 aa26.32■■□□□ 1.8
LIMK1-206ENST00000486361 PLEKHF1Q96S99 279 aa26.32■■□□□ 1.8
LIMK1-206ENST00000486361 SLC39A6Q13433 755 aa26.31■■□□□ 1.8
LIMK1-206ENST00000486361 LINC00116Q8NCU8 138 aa26.31■■□□□ 1.8
LIMK1-206ENST00000486361 SMIM5Q71RC9 77 aa26.29■■□□□ 1.8
LIMK1-206ENST00000486361 ATF5Q9Y2D1 282 aaPredicted RBP26.29■■□□□ 1.8
LIMK1-206ENST00000486361 PNPLA7Q6ZV29 1317 aa26.29■■□□□ 1.8
LIMK1-206ENST00000486361 NEFMP07197 916 aa26.28■■□□□ 1.8
LIMK1-206ENST00000486361 DCTN1Q14203 1278 aa26.28■■□□□ 1.8
LIMK1-206ENST00000486361 MCM10Q7L590 875 aa26.28■■□□□ 1.8
LIMK1-206ENST00000486361 TEFQ10587 303 aa26.27■■□□□ 1.8
LIMK1-206ENST00000486361 CCDC184Q52MB2 194 aa26.26■■□□□ 1.79
LIMK1-206ENST00000486361 SPON1Q9HCB6 807 aa26.26■■□□□ 1.79
LIMK1-206ENST00000486361 CASZ1Q86V15 1759 aa26.25■■□□□ 1.79
LIMK1-206ENST00000486361 C5P01031 1676 aa26.25■■□□□ 1.79
LIMK1-206ENST00000486361 ADAMTS7Q9UKP4 1686 aa26.25■■□□□ 1.79
LIMK1-206ENST00000486361 MRC1P22897 1456 aa26.25■■□□□ 1.79
LIMK1-206ENST00000486361 WDR43Q15061 677 aaKnown RBP eCLIP26.25■■□□□ 1.79
LIMK1-206ENST00000486361 AMIGO3Q86WK7 504 aa26.25■■□□□ 1.79
LIMK1-206ENST00000486361 CCDC146Q8IYE0 955 aa26.25■■□□□ 1.79
LIMK1-206ENST00000486361 RTF1Q92541 710 aaKnown RBP26.25■■□□□ 1.79
LIMK1-206ENST00000486361 AK7Q96M32 723 aa26.25■■□□□ 1.79
LIMK1-206ENST00000486361 PNNQ9H307 717 aaKnown RBP26.25■■□□□ 1.79
LIMK1-206ENST00000486361 VIRMAQ69YN4 1812 aaKnown RBP26.25■■□□□ 1.79
LIMK1-206ENST00000486361 MAPK8IP3Q9UPT6 1336 aa26.24■■□□□ 1.79
LIMK1-206ENST00000486361 TAF1LQ8IZX4 1826 aa26.24■■□□□ 1.79
LIMK1-206ENST00000486361 MSH5O43196 834 aa26.24■■□□□ 1.79
LIMK1-206ENST00000486361 COL23A1Q86Y22 540 aaPredicted RBP26.24■■□□□ 1.79
LIMK1-206ENST00000486361 ADAMTS8Q9UP79 889 aa26.24■■□□□ 1.79
LIMK1-206ENST00000486361 ANP32CO43423 234 aa26.23■■□□□ 1.79
LIMK1-206ENST00000486361 NFE2L2Q16236 605 aa26.23■■□□□ 1.79
LIMK1-206ENST00000486361 CEMIPQ8WUJ3 1361 aa26.22■■□□□ 1.79
LIMK1-206ENST00000486361 C4BP0C0L5 1744 aa26.22■■□□□ 1.79
LIMK1-206ENST00000486361 PHF14O94880 888 aa26.21■■□□□ 1.79
LIMK1-206ENST00000486361 HMGB2P26583 209 aaKnown RBP26.2■■□□□ 1.78
LIMK1-206ENST00000486361 MTFR1LQ9H019 292 aa26.2■■□□□ 1.78
LIMK1-206ENST00000486361 TUBGCP6Q96RT7 1819 aa26.2■■□□□ 1.78
LIMK1-206ENST00000486361 LRP5O75197 1615 aa26.2■■□□□ 1.78
LIMK1-206ENST00000486361 SRCAPQ6ZRS2 3230 aa26.19■■□□□ 1.78
LIMK1-206ENST00000486361 GNPATO15228 680 aa26.19■■□□□ 1.78
LIMK1-206ENST00000486361 KCNQ3O43525 872 aa26.19■■□□□ 1.78
LIMK1-206ENST00000486361 HTATSF1O43719 755 aaKnown RBP26.19■■□□□ 1.78
LIMK1-206ENST00000486361 DNAJC10Q8IXB1 793 aa26.19■■□□□ 1.78
LIMK1-206ENST00000486361 BTBD11A6QL63 1104 aa26.18■■□□□ 1.78
LIMK1-206ENST00000486361 TTC5Q8N0Z6 440 aa26.18■■□□□ 1.78
LIMK1-206ENST00000486361 THUMPD2Q9BTF0 503 aaKnown RBP26.18■■□□□ 1.78
LIMK1-206ENST00000486361 RRP7AQ9Y3A4 280 aaKnown RBP26.18■■□□□ 1.78
LIMK1-206ENST00000486361 PTGER2P43116 358 aa26.17■■□□□ 1.78
LIMK1-206ENST00000486361 ZNF790Q6PG37 636 aa26.17■■□□□ 1.78
LIMK1-206ENST00000486361 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.16■■□□□ 1.78
LIMK1-206ENST00000486361 RIPK4P57078 832 aa26.16■■□□□ 1.78
LIMK1-206ENST00000486361 NEUROD2Q15784 382 aa26.15■■□□□ 1.78
LIMK1-206ENST00000486361 SLC16A10Q8TF71 515 aa26.15■■□□□ 1.78
LIMK1-206ENST00000486361 RUNDC1Q96C34 613 aa26.15■■□□□ 1.78
LIMK1-206ENST00000486361 ZNF496Q96IT1 587 aaPredicted RBP26.15■■□□□ 1.78
LIMK1-206ENST00000486361 MIS18AQ9NYP9 233 aa26.15■■□□□ 1.78
LIMK1-206ENST00000486361 PPP1R1BQ9UD71 204 aaPredicted RBP26.15■■□□□ 1.78
LIMK1-206ENST00000486361 KCPQ6ZWJ8 1503 aa26.14■■□□□ 1.78
LIMK1-206ENST00000486361 TMPOP42166 694 aaKnown RBP26.14■■□□□ 1.78
LIMK1-206ENST00000486361 MSL1Q68DK7 614 aa26.14■■□□□ 1.78
LIMK1-206ENST00000486361 FLAD1Q8NFF5 587 aa26.14■■□□□ 1.78
LIMK1-206ENST00000486361 QSER1Q2KHR3 1735 aa26.14■■□□□ 1.77
LIMK1-206ENST00000486361 CRKLP46109 303 aaKnown RBP26.13■■□□□ 1.77
LIMK1-206ENST00000486361 RC3H1Q5TC82 1133 aaKnown RBP26.13■■□□□ 1.77
LIMK1-206ENST00000486361 DLG5Q8TDM6 1919 aa26.12■■□□□ 1.77
LIMK1-206ENST00000486361 SSFA2P28290 1259 aa26.12■■□□□ 1.77
LIMK1-206ENST00000486361 TAF7Q15545 349 aaPredicted RBP26.12■■□□□ 1.77
LIMK1-206ENST00000486361 SGIP1Q9BQI5 828 aa26.12■■□□□ 1.77
LIMK1-206ENST00000486361 RTCBQ9Y3I0 505 aaKnown RBP26.12■■□□□ 1.77
LIMK1-206ENST00000486361 SIPA1L3O60292 1781 aaPredicted RBP26.12■■□□□ 1.77
LIMK1-206ENST00000486361 CNTNAP4Q9C0A0 1308 aa26.12■■□□□ 1.77
LIMK1-206ENST00000486361 ZNF831Q5JPB2 1677 aa26.11■■□□□ 1.77
LIMK1-206ENST00000486361 TJP1Q07157 1748 aa26.11■■□□□ 1.77
LIMK1-206ENST00000486361 RPS6KA4O75676 772 aa26.1■■□□□ 1.77
LIMK1-206ENST00000486361 INTS5Q6P9B9 1019 aaKnown RBP26.1■■□□□ 1.77
LIMK1-206ENST00000486361 MRS2Q9HD23 443 aa26.1■■□□□ 1.77
LIMK1-206ENST00000486361 UBR3Q6ZT12 1888 aa26.1■■□□□ 1.77
LIMK1-206ENST00000486361 COL5A3P25940 1745 aaPredicted RBP26.09■■□□□ 1.77
LIMK1-206ENST00000486361 CYP19A1P11511 503 aaPredicted RBP26.09■■□□□ 1.77
LIMK1-206ENST00000486361 TRAPPC3LQ5T215 181 aa26.09■■□□□ 1.77
LIMK1-206ENST00000486361 VSIG10Q8N0Z9 540 aa26.09■■□□□ 1.77
LIMK1-206ENST00000486361 HEG1Q9ULI3 1381 aa26.08■■□□□ 1.77
LIMK1-206ENST00000486361 ARHGEF1Q92888 912 aaKnown RBP26.08■■□□□ 1.77
LIMK1-206ENST00000486361 FMNL2Q96PY5 1086 aa26.08■■□□□ 1.77
LIMK1-206ENST00000486361 MYH14Q7Z406 1995 aaKnown RBP26.07■■□□□ 1.76
LIMK1-206ENST00000486361 CCDC87Q9NVE4 849 aa26.07■■□□□ 1.76
LIMK1-206ENST00000486361 UBR2Q8IWV8 1755 aa26.06■■□□□ 1.76
LIMK1-206ENST00000486361 SENP3-EIF4A1A0A087X0R7 540 aa26.06■■□□□ 1.76
LIMK1-206ENST00000486361 PNISRQ8TF01 805 aaKnown RBP26.06■■□□□ 1.76
LIMK1-206ENST00000486361 PRAMEF22A3QJZ6 481 aa26.05■■□□□ 1.76
LIMK1-206ENST00000486361 APAF1O14727 1248 aa26.05■■□□□ 1.76
LIMK1-206ENST00000486361 POLD1P28340 1107 aa26.05■■□□□ 1.76
LIMK1-206ENST00000486361 ARXQ96QS3 562 aa26.05■■□□□ 1.76
LIMK1-206ENST00000486361 TRIM35Q9UPQ4 493 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms