RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 RNMTO43148 476 aaKnown RBP14.78□□□□□ -0.04
SNX21-211ENST00000486336 PHF14O94880 888 aa14.78□□□□□ -0.04
SNX21-211ENST00000486336 U2AF1L5P0DN76 240 aaPredicted RBP14.78□□□□□ -0.04
SNX21-211ENST00000486336 POLD1P28340 1107 aa14.78□□□□□ -0.04
SNX21-211ENST00000486336 U2AF1Q01081 240 aaKnown RBP eCLIP14.78□□□□□ -0.04
SNX21-211ENST00000486336 ITPK1Q13572 414 aa14.78□□□□□ -0.04
SNX21-211ENST00000486336 SMIM5Q71RC9 77 aa14.78□□□□□ -0.04
SNX21-211ENST00000486336 KLHL34Q8N239 644 aa14.78□□□□□ -0.04
SNX21-211ENST00000486336 LINC00116Q8NCU8 138 aa14.78□□□□□ -0.04
SNX21-211ENST00000486336 DCAF8L1A6NGE4 600 aa14.77□□□□□ -0.05
SNX21-211ENST00000486336 PTCD1O75127 700 aaKnown RBP14.77□□□□□ -0.05
SNX21-211ENST00000486336 MSL1Q68DK7 614 aa14.77□□□□□ -0.05
SNX21-211ENST00000486336 FLAD1Q8NFF5 587 aa14.77□□□□□ -0.05
SNX21-211ENST00000486336 ARXQ96QS3 562 aa14.77□□□□□ -0.05
SNX21-211ENST00000486336 PRKAR2BP31323 418 aa14.76□□□□□ -0.05
SNX21-211ENST00000486336 C5P01031 1676 aa14.76□□□□□ -0.05
SNX21-211ENST00000486336 GNPATO15228 680 aa14.75□□□□□ -0.05
SNX21-211ENST00000486336 ZEB1P37275 1124 aaPredicted RBP14.75□□□□□ -0.05
SNX21-211ENST00000486336 GAS2L2Q8NHY3 880 aa14.75□□□□□ -0.05
SNX21-211ENST00000486336 SGIP1Q9BQI5 828 aa14.75□□□□□ -0.05
SNX21-211ENST00000486336 FHDC1Q9C0D6 1143 aaPredicted RBP14.75□□□□□ -0.05
SNX21-211ENST00000486336 SLC52A2Q9HAB3 445 aa14.75□□□□□ -0.05
SNX21-211ENST00000486336 TUBGCP6Q96RT7 1819 aa14.75□□□□□ -0.05
SNX21-211ENST00000486336 SLC4A9Q96Q91 983 aa14.74□□□□□ -0.05
SNX21-211ENST00000486336 TAF1LQ8IZX4 1826 aa14.73□□□□□ -0.05
SNX21-211ENST00000486336 C4BP0C0L5 1744 aa14.73□□□□□ -0.05
SNX21-211ENST00000486336 QSER1Q2KHR3 1735 aa14.73□□□□□ -0.05
SNX21-211ENST00000486336 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.73□□□□□ -0.05
SNX21-211ENST00000486336 GNAT3A8MTJ3 354 aa14.73□□□□□ -0.05
SNX21-211ENST00000486336 SLC39A6Q13433 755 aa14.73□□□□□ -0.05
SNX21-211ENST00000486336 AMIGO3Q86WK7 504 aa14.73□□□□□ -0.05
SNX21-211ENST00000486336 PHACTR3Q96KR7 559 aa14.73□□□□□ -0.05
SNX21-211ENST00000486336 SYT17Q9BSW7 474 aa14.73□□□□□ -0.05
SNX21-211ENST00000486336 RSPH6AQ9H0K4 717 aa14.73□□□□□ -0.05
SNX21-211ENST00000486336 SCN11AQ9UI33 1791 aa14.71□□□□□ -0.05
SNX21-211ENST00000486336 FCHSD2O94868 740 aa14.71□□□□□ -0.05
SNX21-211ENST00000486336 SSFA2P28290 1259 aa14.71□□□□□ -0.05
SNX21-211ENST00000486336 TEFQ10587 303 aa14.71□□□□□ -0.05
SNX21-211ENST00000486336 RALBP1Q15311 655 aa14.71□□□□□ -0.05
SNX21-211ENST00000486336 RTCBQ9Y3I0 505 aaKnown RBP14.71□□□□□ -0.05
SNX21-211ENST00000486336 MAP3K5Q99683 1374 aa14.71□□□□□ -0.06
SNX21-211ENST00000486336 NEFMP07197 916 aa14.7□□□□□ -0.06
SNX21-211ENST00000486336 TRAPPC3LQ5T215 181 aa14.7□□□□□ -0.06
SNX21-211ENST00000486336 RC3H1Q5TC82 1133 aaKnown RBP14.69□□□□□ -0.06
SNX21-211ENST00000486336 TTC5Q8N0Z6 440 aa14.69□□□□□ -0.06
SNX21-211ENST00000486336 IL17REQ8NFR9 667 aa14.69□□□□□ -0.06
SNX21-211ENST00000486336 CRKLP46109 303 aaKnown RBP14.68□□□□□ -0.06
SNX21-211ENST00000486336 DNAJC10Q8IXB1 793 aa14.68□□□□□ -0.06
SNX21-211ENST00000486336 RTF1Q92541 710 aaKnown RBP14.68□□□□□ -0.06
SNX21-211ENST00000486336 RPS6KA4O75676 772 aa14.67□□□□□ -0.06
SNX21-211ENST00000486336 RFC4P35249 363 aa14.67□□□□□ -0.06
SNX21-211ENST00000486336 PELP1Q8IZL8 1130 aaKnown RBP14.67□□□□□ -0.06
SNX21-211ENST00000486336 CNTNAP4Q9C0A0 1308 aa14.66□□□□□ -0.06
SNX21-211ENST00000486336 UBR3Q6ZT12 1888 aa14.66□□□□□ -0.06
SNX21-211ENST00000486336 ARHGEF1Q92888 912 aaKnown RBP14.66□□□□□ -0.06
SNX21-211ENST00000486336 VIRMAQ69YN4 1812 aaKnown RBP14.65□□□□□ -0.06
SNX21-211ENST00000486336 DCTN1Q14203 1278 aa14.65□□□□□ -0.06
SNX21-211ENST00000486336 MCM10Q7L590 875 aa14.65□□□□□ -0.06
SNX21-211ENST00000486336 BTBD11A6QL63 1104 aa14.64□□□□□ -0.07
SNX21-211ENST00000486336 ADRA2BP18089 450 aa14.64□□□□□ -0.07
SNX21-211ENST00000486336 GPR162Q16538 588 aa14.64□□□□□ -0.07
SNX21-211ENST00000486336 NLGN2Q8NFZ4 835 aa14.64□□□□□ -0.07
SNX21-211ENST00000486336 PNNQ9H307 717 aaKnown RBP14.64□□□□□ -0.07
SNX21-211ENST00000486336 CCDC87Q9NVE4 849 aa14.64□□□□□ -0.07
SNX21-211ENST00000486336 MYBBP1AQ9BQG0 1328 aaKnown RBP14.64□□□□□ -0.07
SNX21-211ENST00000486336 MRC1P22897 1456 aa14.63□□□□□ -0.07
SNX21-211ENST00000486336 INTS5Q6P9B9 1019 aaKnown RBP14.63□□□□□ -0.07
SNX21-211ENST00000486336 ZNF790Q6PG37 636 aa14.63□□□□□ -0.07
SNX21-211ENST00000486336 MAPK8IP3Q9UPT6 1336 aa14.63□□□□□ -0.07
SNX21-211ENST00000486336 ZNF831Q5JPB2 1677 aa14.62□□□□□ -0.07
SNX21-211ENST00000486336 KCNQ3O43525 872 aa14.62□□□□□ -0.07
SNX21-211ENST00000486336 MMP10P09238 476 aa14.62□□□□□ -0.07
SNX21-211ENST00000486336 CYP19A1P11511 503 aaPredicted RBP14.62□□□□□ -0.07
SNX21-211ENST00000486336 NLGN1Q8N2Q7 840 aa14.62□□□□□ -0.07
SNX21-211ENST00000486336 ZNF496Q96IT1 587 aaPredicted RBP14.62□□□□□ -0.07
SNX21-211ENST00000486336 COL5A3P25940 1745 aaPredicted RBP14.61□□□□□ -0.07
SNX21-211ENST00000486336 HTATSF1O43719 755 aaKnown RBP14.61□□□□□ -0.07
SNX21-211ENST00000486336 STARD3NLO95772 234 aa14.61□□□□□ -0.07
SNX21-211ENST00000486336 CANXP27824 592 aaKnown RBP14.61□□□□□ -0.07
SNX21-211ENST00000486336 VSIG10Q8N0Z9 540 aa14.61□□□□□ -0.07
SNX21-211ENST00000486336 FMNL2Q96PY5 1086 aa14.61□□□□□ -0.07
SNX21-211ENST00000486336 SRP68Q9UHB9 627 aaKnown RBP14.61□□□□□ -0.07
SNX21-211ENST00000486336 MYH14Q7Z406 1995 aaKnown RBP14.61□□□□□ -0.07
SNX21-211ENST00000486336 ADAMTS7Q9UKP4 1686 aa14.61□□□□□ -0.07
SNX21-211ENST00000486336 COL24A1Q17RW2 1714 aa14.61□□□□□ -0.07
SNX21-211ENST00000486336 CEMIPQ8WUJ3 1361 aa14.6□□□□□ -0.07
SNX21-211ENST00000486336 ZPR1O75312 459 aa14.6□□□□□ -0.07
SNX21-211ENST00000486336 GYS1P13807 737 aa14.6□□□□□ -0.07
SNX21-211ENST00000486336 YY1P25490 414 aa14.6□□□□□ -0.07
SNX21-211ENST00000486336 PLEKHF1Q96S99 279 aa14.6□□□□□ -0.07
SNX21-211ENST00000486336 CD2APQ9Y5K6 639 aa14.6□□□□□ -0.07
SNX21-211ENST00000486336 TJP1Q07157 1748 aa14.6□□□□□ -0.07
SNX21-211ENST00000486336 KCPQ6ZWJ8 1503 aa14.6□□□□□ -0.07
SNX21-211ENST00000486336 WDR43Q15061 677 aaKnown RBP eCLIP14.59□□□□□ -0.07
SNX21-211ENST00000486336 NFE2L2Q16236 605 aa14.59□□□□□ -0.07
SNX21-211ENST00000486336 TEX13AQ9BXU3 409 aaPredicted RBP14.59□□□□□ -0.07
SNX21-211ENST00000486336 MIS18AQ9NYP9 233 aa14.59□□□□□ -0.07
SNX21-211ENST00000486336 ZBTB1Q9Y2K1 713 aa14.59□□□□□ -0.07
SNX21-211ENST00000486336 ZNF330Q9Y3S2 320 aaPredicted RBP14.59□□□□□ -0.07
SNX21-211ENST00000486336 PARP3Q9Y6F1 533 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms