RNA–Protein interactions for RNA: ENST00000486229.5

NBPF3-212, Transcript of NBPF member 3, humanhuman

TSL 3

Gene NBPF3, Length 933 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-212ENST00000486229 TOGARAM1Q9Y4F4 1720 aa29.88■■■□□ 2.37
NBPF3-212ENST00000486229 TRIM37O94972 964 aa29.87■■■□□ 2.37
NBPF3-212ENST00000486229 IL17REQ8NFR9 667 aa29.87■■■□□ 2.37
NBPF3-212ENST00000486229 LGR6Q9HBX8 967 aa29.87■■■□□ 2.37
NBPF3-212ENST00000486229 MRC1P22897 1456 aa29.87■■■□□ 2.37
NBPF3-212ENST00000486229 RREB1Q92766 1687 aa29.86■■■□□ 2.37
NBPF3-212ENST00000486229 HMGB2P26583 209 aaKnown RBP29.85■■■□□ 2.37
NBPF3-212ENST00000486229 MCM10Q7L590 875 aa29.85■■■□□ 2.37
NBPF3-212ENST00000486229 SMARCC1Q92922 1105 aaPredicted RBP29.84■■■□□ 2.37
NBPF3-212ENST00000486229 NFATC2IPQ8NCF5 419 aa29.83■■■□□ 2.37
NBPF3-212ENST00000486229 BABAM1Q9NWV8 329 aa29.82■■■□□ 2.36
NBPF3-212ENST00000486229 TRIM35Q9UPQ4 493 aa29.82■■■□□ 2.36
NBPF3-212ENST00000486229 BTAF1O14981 1849 aa29.82■■■□□ 2.36
NBPF3-212ENST00000486229 KCNQ2O43526 872 aa29.81■■■□□ 2.36
NBPF3-212ENST00000486229 TAF7Q15545 349 aaPredicted RBP29.81■■■□□ 2.36
NBPF3-212ENST00000486229 NUP188Q5SRE5 1749 aa29.81■■■□□ 2.36
NBPF3-212ENST00000486229 DCTN1Q14203 1278 aa29.8■■■□□ 2.36
NBPF3-212ENST00000486229 PIGBQ92521 554 aa29.8■■■□□ 2.36
NBPF3-212ENST00000486229 SIPA1L3O60292 1781 aaPredicted RBP29.8■■■□□ 2.36
NBPF3-212ENST00000486229 APBA3O96018 575 aa29.78■■■□□ 2.36
NBPF3-212ENST00000486229 WWC1Q8IX03 1113 aa29.78■■■□□ 2.36
NBPF3-212ENST00000486229 TTC5Q8N0Z6 440 aa29.78■■■□□ 2.36
NBPF3-212ENST00000486229 BTBD11A6QL63 1104 aa29.77■■■□□ 2.36
NBPF3-212ENST00000486229 WDR63Q8IWG1 891 aa29.77■■■□□ 2.36
NBPF3-212ENST00000486229 PLSCR1O15162 318 aa29.76■■■□□ 2.35
NBPF3-212ENST00000486229 IL16Q14005 1332 aa29.75■■■□□ 2.35
NBPF3-212ENST00000486229 RGPD3A6NKT7 1758 aaPredicted RBP29.75■■■□□ 2.35
NBPF3-212ENST00000486229 RGPD4Q7Z3J3 1758 aa29.75■■■□□ 2.35
NBPF3-212ENST00000486229 GNAI1P63096 354 aa29.75■■■□□ 2.35
NBPF3-212ENST00000486229 HNRNPUQ00839 825 aaKnown RBP eCLIP29.74■■■□□ 2.35
NBPF3-212ENST00000486229 SALL2Q9Y467 1007 aaPredicted RBP29.74■■■□□ 2.35
NBPF3-212ENST00000486229 THUMPD2Q9BTF0 503 aaKnown RBP29.73■■■□□ 2.35
NBPF3-212ENST00000486229 CFAP44Q96MT7 982 aa29.72■■■□□ 2.35
NBPF3-212ENST00000486229 IFT57Q9NWB7 429 aa29.72■■■□□ 2.35
NBPF3-212ENST00000486229 YY1P25490 414 aa29.71■■■□□ 2.35
NBPF3-212ENST00000486229 PALLDQ8WX93 1383 aa29.71■■■□□ 2.35
NBPF3-212ENST00000486229 ZNF790Q6PG37 636 aa29.7■■■□□ 2.35
NBPF3-212ENST00000486229 ATG3Q9NT62 314 aa29.7■■■□□ 2.35
NBPF3-212ENST00000486229 TSPYL4Q9UJ04 414 aa29.7■■■□□ 2.35
NBPF3-212ENST00000486229 PAPPAQ13219 1627 aa29.69■■■□□ 2.34
NBPF3-212ENST00000486229 SLC27A3Q5K4L6 730 aa29.68■■■□□ 2.34
NBPF3-212ENST00000486229 ASAP1Q9ULH1 1129 aa29.68■■■□□ 2.34
NBPF3-212ENST00000486229 LAS1LQ9Y4W2 734 aaKnown RBP29.68■■■□□ 2.34
NBPF3-212ENST00000486229 CHL1O00533 1208 aa29.67■■■□□ 2.34
NBPF3-212ENST00000486229 PTF1AQ7RTS3 328 aa29.67■■■□□ 2.34
NBPF3-212ENST00000486229 LY75O60449 1722 aa29.67■■■□□ 2.34
NBPF3-212ENST00000486229 FMNL2Q96PY5 1086 aa29.66■■■□□ 2.34
NBPF3-212ENST00000486229 MYH16Q9H6N6 1097 aa29.66■■■□□ 2.34
NBPF3-212ENST00000486229 KDM3BQ7LBC6 1761 aa29.66■■■□□ 2.34
NBPF3-212ENST00000486229 GOLGA2Q08379 1002 aa29.65■■■□□ 2.34
NBPF3-212ENST00000486229 VSIG10Q8N0Z9 540 aa29.65■■■□□ 2.34
NBPF3-212ENST00000486229 ZNF831Q5JPB2 1677 aa29.64■■■□□ 2.34
NBPF3-212ENST00000486229 SENP3-EIF4A1A0A087X0R7 540 aa29.64■■■□□ 2.34
NBPF3-212ENST00000486229 RBM42Q9BTD8 480 aaKnown RBP29.64■■■□□ 2.34
NBPF3-212ENST00000486229 ZNF521Q96K83 1311 aa29.64■■■□□ 2.34
NBPF3-212ENST00000486229 UBR2Q8IWV8 1755 aa29.64■■■□□ 2.34
NBPF3-212ENST00000486229 LOC102724428A0A0B4J2F2 783 aa29.63■■■□□ 2.33
NBPF3-212ENST00000486229 SIK1P57059 783 aa29.63■■■□□ 2.33
NBPF3-212ENST00000486229 SLC39A6Q13433 755 aa29.63■■■□□ 2.33
NBPF3-212ENST00000486229 TEX13AQ9BXU3 409 aaPredicted RBP29.63■■■□□ 2.33
NBPF3-212ENST00000486229 ZNF853P0CG23 659 aa29.62■■■□□ 2.33
NBPF3-212ENST00000486229 CCNL1Q9UK58 526 aaPredicted RBP29.62■■■□□ 2.33
NBPF3-212ENST00000486229 ZBED9Q6R2W3 1325 aa29.62■■■□□ 2.33
NBPF3-212ENST00000486229 E9PSI1 815 aa29.61■■■□□ 2.33
NBPF3-212ENST00000486229 TXNRD1Q16881 649 aa29.61■■■□□ 2.33
NBPF3-212ENST00000486229 CHMP4AQ9BY43 222 aa29.61■■■□□ 2.33
NBPF3-212ENST00000486229 PTCD1O75127 700 aaKnown RBP29.6■■■□□ 2.33
NBPF3-212ENST00000486229 ATP6V1AP38606 617 aa29.59■■■□□ 2.33
NBPF3-212ENST00000486229 NBPF14Q5TI25 921 aa29.59■■■□□ 2.33
NBPF3-212ENST00000486229 MIS18AQ9NYP9 233 aa29.59■■■□□ 2.33
NBPF3-212ENST00000486229 MBIPQ9NS73 344 aa29.58■■■□□ 2.33
NBPF3-212ENST00000486229 HEG1Q9ULI3 1381 aa29.58■■■□□ 2.33
NBPF3-212ENST00000486229 KCPQ6ZWJ8 1503 aa29.57■■■□□ 2.32
NBPF3-212ENST00000486229 SNRPA1P09661 255 aaKnown RBP29.57■■■□□ 2.32
NBPF3-212ENST00000486229 ZNF496Q96IT1 587 aaPredicted RBP29.57■■■□□ 2.32
NBPF3-212ENST00000486229 SPON1Q9HCB6 807 aa29.57■■■□□ 2.32
NBPF3-212ENST00000486229 CICQ96RK0 1608 aaPredicted RBP29.56■■■□□ 2.32
NBPF3-212ENST00000486229 SOS1Q07889 1333 aaPredicted RBP29.56■■■□□ 2.32
NBPF3-212ENST00000486229 EIF4A1P60842 406 aaKnown RBP29.56■■■□□ 2.32
NBPF3-212ENST00000486229 UTRNP46939 3433 aa29.54■■■□□ 2.32
NBPF3-212ENST00000486229 STARD3NLO95772 234 aa29.53■■■□□ 2.32
NBPF3-212ENST00000486229 HOXB7P09629 217 aa29.53■■■□□ 2.32
NBPF3-212ENST00000486229 CASZ1Q86V15 1759 aa29.53■■■□□ 2.32
NBPF3-212ENST00000486229 KCNQ3O43525 872 aa29.52■■■□□ 2.32
NBPF3-212ENST00000486229 C5P01031 1676 aa29.5■■■□□ 2.31
NBPF3-212ENST00000486229 TAF1LQ8IZX4 1826 aa29.5■■■□□ 2.31
NBPF3-212ENST00000486229 FANCIQ9NVI1 1328 aa29.5■■■□□ 2.31
NBPF3-212ENST00000486229 SLFN5Q08AF3 891 aa29.5■■■□□ 2.31
NBPF3-212ENST00000486229 GIGYF1O75420 1035 aaPredicted RBP29.49■■■□□ 2.31
NBPF3-212ENST00000486229 PROM2Q8N271 834 aa29.49■■■□□ 2.31
NBPF3-212ENST00000486229 TSR2Q969E8 191 aaKnown RBP29.48■■■□□ 2.31
NBPF3-212ENST00000486229 LAMB4A4D0S4 1761 aa29.47■■■□□ 2.31
NBPF3-212ENST00000486229 PPP1R1BQ9UD71 204 aaPredicted RBP29.47■■■□□ 2.31
NBPF3-212ENST00000486229 TJP1Q07157 1748 aa29.47■■■□□ 2.31
NBPF3-212ENST00000486229 COL5A3P25940 1745 aaPredicted RBP29.46■■■□□ 2.31
NBPF3-212ENST00000486229 RC3H1Q5TC82 1133 aaKnown RBP29.46■■■□□ 2.31
NBPF3-212ENST00000486229 DNAJC10Q8IXB1 793 aa29.46■■■□□ 2.31
NBPF3-212ENST00000486229 LRRC4BQ9NT99 713 aa29.46■■■□□ 2.31
NBPF3-212ENST00000486229 SLC4A9Q96Q91 983 aa29.45■■■□□ 2.31
NBPF3-212ENST00000486229 CNTNAP4Q9C0A0 1308 aa29.45■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms