RNA–Protein interactions for RNA: ENST00000486060.1

CCHCR1-214, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 582 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-214ENST00000486060 AKAP4Q5JQC9 854 aa22.41■■□□□ 1.18
CCHCR1-214ENST00000486060 AMIGO3Q86WK7 504 aa22.41■■□□□ 1.18
CCHCR1-214ENST00000486060 SLC4A9Q96Q91 983 aa22.41■■□□□ 1.18
CCHCR1-214ENST00000486060 LGR6Q9HBX8 967 aa22.41■■□□□ 1.18
CCHCR1-214ENST00000486060 TFCP2L1Q9NZI6 479 aa22.41■■□□□ 1.18
CCHCR1-214ENST00000486060 DDX10Q13206 875 aaKnown RBP22.4■■□□□ 1.18
CCHCR1-214ENST00000486060 ITPK1Q13572 414 aa22.4■■□□□ 1.18
CCHCR1-214ENST00000486060 MTFR1LQ9H019 292 aa22.4■■□□□ 1.18
CCHCR1-214ENST00000486060 LINC00116Q8NCU8 138 aa22.39■■□□□ 1.17
CCHCR1-214ENST00000486060 DLG5Q8TDM6 1919 aa22.39■■□□□ 1.17
CCHCR1-214ENST00000486060 CICQ96RK0 1608 aaPredicted RBP22.39■■□□□ 1.17
CCHCR1-214ENST00000486060 CABP4P57796 275 aa22.38■■□□□ 1.17
CCHCR1-214ENST00000486060 SMIM5Q71RC9 77 aa22.38■■□□□ 1.17
CCHCR1-214ENST00000486060 COL23A1Q86Y22 540 aaPredicted RBP22.38■■□□□ 1.17
CCHCR1-214ENST00000486060 NFATC2IPQ8NCF5 419 aa22.38■■□□□ 1.17
CCHCR1-214ENST00000486060 CFAP53Q96M91 514 aa22.38■■□□□ 1.17
CCHCR1-214ENST00000486060 RSPH6AQ9H0K4 717 aa22.38■■□□□ 1.17
CCHCR1-214ENST00000486060 UBR2Q8IWV8 1755 aa22.38■■□□□ 1.17
CCHCR1-214ENST00000486060 RNMTO43148 476 aaKnown RBP22.36■■□□□ 1.17
CCHCR1-214ENST00000486060 PHACTR3Q96KR7 559 aa22.36■■□□□ 1.17
CCHCR1-214ENST00000486060 PRKAR2BP31323 418 aa22.34■■□□□ 1.17
CCHCR1-214ENST00000486060 ATP6V1AP38606 617 aa22.34■■□□□ 1.17
CCHCR1-214ENST00000486060 PPP1R1BQ9UD71 204 aaPredicted RBP22.34■■□□□ 1.17
CCHCR1-214ENST00000486060 SLC16A10Q8TF71 515 aa22.33■■□□□ 1.17
CCHCR1-214ENST00000486060 SLC52A2Q9HAB3 445 aa22.33■■□□□ 1.17
CCHCR1-214ENST00000486060 C4AP0C0L4 1744 aa22.32■■□□□ 1.16
CCHCR1-214ENST00000486060 RBM42Q9BTD8 480 aaKnown RBP22.32■■□□□ 1.16
CCHCR1-214ENST00000486060 KCPQ6ZWJ8 1503 aa22.31■■□□□ 1.16
CCHCR1-214ENST00000486060 MAP3K5Q99683 1374 aa22.31■■□□□ 1.16
CCHCR1-214ENST00000486060 U2AF1L5P0DN76 240 aaPredicted RBP22.31■■□□□ 1.16
CCHCR1-214ENST00000486060 U2AF1Q01081 240 aaKnown RBP eCLIP22.31■■□□□ 1.16
CCHCR1-214ENST00000486060 NUDCQ9Y266 331 aa22.31■■□□□ 1.16
CCHCR1-214ENST00000486060 IL17REQ8NFR9 667 aa22.3■■□□□ 1.16
CCHCR1-214ENST00000486060 AK7Q96M32 723 aa22.3■■□□□ 1.16
CCHCR1-214ENST00000486060 PTCD1O75127 700 aaKnown RBP22.29■■□□□ 1.16
CCHCR1-214ENST00000486060 ZEB1P37275 1124 aaPredicted RBP22.28■■□□□ 1.16
CCHCR1-214ENST00000486060 SLC39A6Q13433 755 aa22.28■■□□□ 1.16
CCHCR1-214ENST00000486060 GAS2L2Q8NHY3 880 aa22.28■■□□□ 1.16
CCHCR1-214ENST00000486060 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.27■■□□□ 1.16
CCHCR1-214ENST00000486060 MSH5O43196 834 aa22.27■■□□□ 1.16
CCHCR1-214ENST00000486060 FCHSD2O94868 740 aa22.27■■□□□ 1.16
CCHCR1-214ENST00000486060 PHF14O94880 888 aa22.27■■□□□ 1.16
CCHCR1-214ENST00000486060 ARXQ96QS3 562 aa22.27■■□□□ 1.16
CCHCR1-214ENST00000486060 FHDC1Q9C0D6 1143 aaPredicted RBP22.27■■□□□ 1.16
CCHCR1-214ENST00000486060 GNAT3A8MTJ3 354 aa22.26■■□□□ 1.15
CCHCR1-214ENST00000486060 RALBP1Q15311 655 aa22.26■■□□□ 1.15
CCHCR1-214ENST00000486060 MSL1Q68DK7 614 aa22.26■■□□□ 1.15
CCHCR1-214ENST00000486060 CEMIPQ8WUJ3 1361 aa22.25■■□□□ 1.15
CCHCR1-214ENST00000486060 GNPATO15228 680 aa22.25■■□□□ 1.15
CCHCR1-214ENST00000486060 HMGB2P26583 209 aaKnown RBP22.25■■□□□ 1.15
CCHCR1-214ENST00000486060 SSFA2P28290 1259 aa22.24■■□□□ 1.15
CCHCR1-214ENST00000486060 FLAD1Q8NFF5 587 aa22.24■■□□□ 1.15
CCHCR1-214ENST00000486060 SYT17Q9BSW7 474 aa22.24■■□□□ 1.15
CCHCR1-214ENST00000486060 CNTNAP4Q9C0A0 1308 aa22.24■■□□□ 1.15
CCHCR1-214ENST00000486060 RC3H1Q5TC82 1133 aaKnown RBP22.23■■□□□ 1.15
CCHCR1-214ENST00000486060 UTRNP46939 3433 aa22.22■■□□□ 1.15
CCHCR1-214ENST00000486060 PLEKHF1Q96S99 279 aa22.22■■□□□ 1.15
CCHCR1-214ENST00000486060 DNAJC10Q8IXB1 793 aa22.21■■□□□ 1.15
CCHCR1-214ENST00000486060 GOLGB1Q14789 3259 aaKnown RBP22.2■■□□□ 1.14
CCHCR1-214ENST00000486060 POLD1P28340 1107 aa22.2■■□□□ 1.14
CCHCR1-214ENST00000486060 CRKLP46109 303 aaKnown RBP22.2■■□□□ 1.14
CCHCR1-214ENST00000486060 MYBBP1AQ9BQG0 1328 aaKnown RBP22.2■■□□□ 1.14
CCHCR1-214ENST00000486060 RPS6KA4O75676 772 aa22.19■■□□□ 1.14
CCHCR1-214ENST00000486060 INTS5Q6P9B9 1019 aaKnown RBP22.19■■□□□ 1.14
CCHCR1-214ENST00000486060 DCTN1Q14203 1278 aa22.18■■□□□ 1.14
CCHCR1-214ENST00000486060 RTCBQ9Y3I0 505 aaKnown RBP22.18■■□□□ 1.14
CCHCR1-214ENST00000486060 KCNQ3O43525 872 aa22.17■■□□□ 1.14
CCHCR1-214ENST00000486060 TEFQ10587 303 aa22.17■■□□□ 1.14
CCHCR1-214ENST00000486060 MCM10Q7L590 875 aa22.17■■□□□ 1.14
CCHCR1-214ENST00000486060 ARHGEF1Q92888 912 aaKnown RBP22.17■■□□□ 1.14
CCHCR1-214ENST00000486060 KIF13BQ9NQT8 1826 aa22.17■■□□□ 1.14
CCHCR1-214ENST00000486060 KDM3BQ7LBC6 1761 aa22.17■■□□□ 1.14
CCHCR1-214ENST00000486060 CYP19A1P11511 503 aaPredicted RBP22.16■■□□□ 1.14
CCHCR1-214ENST00000486060 PRKRIP1Q9H875 184 aaPredicted RBP22.16■■□□□ 1.14
CCHCR1-214ENST00000486060 ZNF790Q6PG37 636 aa22.15■■□□□ 1.14
CCHCR1-214ENST00000486060 ZNF496Q96IT1 587 aaPredicted RBP22.15■■□□□ 1.14
CCHCR1-214ENST00000486060 TRAPPC3LQ5T215 181 aa22.14■■□□□ 1.13
CCHCR1-214ENST00000486060 NLGN2Q8NFZ4 835 aa22.14■■□□□ 1.13
CCHCR1-214ENST00000486060 KIAA1551Q9HCM1 1747 aa22.14■■□□□ 1.13
CCHCR1-214ENST00000486060 CHD4Q14839 1912 aa22.14■■□□□ 1.13
CCHCR1-214ENST00000486060 ADRA2BP18089 450 aa22.13■■□□□ 1.13
CCHCR1-214ENST00000486060 VSIG10Q8N0Z9 540 aa22.13■■□□□ 1.13
CCHCR1-214ENST00000486060 KLHL34Q8N239 644 aa22.13■■□□□ 1.13
CCHCR1-214ENST00000486060 HEG1Q9ULI3 1381 aa22.12■■□□□ 1.13
CCHCR1-214ENST00000486060 CCDC87Q9NVE4 849 aa22.12■■□□□ 1.13
CCHCR1-214ENST00000486060 HTATSF1O43719 755 aaKnown RBP22.11■■□□□ 1.13
CCHCR1-214ENST00000486060 GYS1P13807 737 aa22.11■■□□□ 1.13
CCHCR1-214ENST00000486060 ZBTB1Q9Y2K1 713 aa22.11■■□□□ 1.13
CCHCR1-214ENST00000486060 SOS1Q07889 1333 aaPredicted RBP22.1■■□□□ 1.13
CCHCR1-214ENST00000486060 BTBD11A6QL63 1104 aa22.1■■□□□ 1.13
CCHCR1-214ENST00000486060 NFE2L2Q16236 605 aa22.1■■□□□ 1.13
CCHCR1-214ENST00000486060 TTC5Q8N0Z6 440 aa22.1■■□□□ 1.13
CCHCR1-214ENST00000486060 RTF1Q92541 710 aaKnown RBP22.1■■□□□ 1.13
CCHCR1-214ENST00000486060 SRP68Q9UHB9 627 aaKnown RBP22.1■■□□□ 1.13
CCHCR1-214ENST00000486060 AFDNP55196 1824 aaKnown RBP22.1■■□□□ 1.13
CCHCR1-214ENST00000486060 N4BP2Q86UW6 1770 aaPredicted RBP22.1■■□□□ 1.13
CCHCR1-214ENST00000486060 LAMB4A4D0S4 1761 aa22.08■■□□□ 1.13
CCHCR1-214ENST00000486060 ZNF316A6NFI3 1004 aaPredicted RBP22.08■■□□□ 1.13
CCHCR1-214ENST00000486060 RFC4P35249 363 aa22.08■■□□□ 1.13
CCHCR1-214ENST00000486060 THUMPD2Q9BTF0 503 aaKnown RBP22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms