RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 MTHFSDQ2M296 383 aaKnown RBP26.31■■□□□ 1.8
SNX5-213ENST00000486039 AKAP4Q5JQC9 854 aa26.31■■□□□ 1.8
SNX5-213ENST00000486039 COL23A1Q86Y22 540 aaPredicted RBP26.3■■□□□ 1.8
SNX5-213ENST00000486039 CFAP53Q96M91 514 aa26.3■■□□□ 1.8
SNX5-213ENST00000486039 MSH5O43196 834 aa26.29■■□□□ 1.8
SNX5-213ENST00000486039 TAF1LQ8IZX4 1826 aa26.28■■□□□ 1.8
SNX5-213ENST00000486039 ITPK1Q13572 414 aa26.27■■□□□ 1.8
SNX5-213ENST00000486039 KLHL34Q8N239 644 aa26.27■■□□□ 1.8
SNX5-213ENST00000486039 NFATC2IPQ8NCF5 419 aa26.27■■□□□ 1.8
SNX5-213ENST00000486039 LINC00116Q8NCU8 138 aa26.27■■□□□ 1.8
SNX5-213ENST00000486039 LGR6Q9HBX8 967 aa26.27■■□□□ 1.8
SNX5-213ENST00000486039 ATP6V1AP38606 617 aa26.26■■□□□ 1.79
SNX5-213ENST00000486039 C4BP0C0L5 1744 aa26.25■■□□□ 1.79
SNX5-213ENST00000486039 SLC4A9Q96Q91 983 aa26.25■■□□□ 1.79
SNX5-213ENST00000486039 AMIGO3Q86WK7 504 aa26.24■■□□□ 1.79
SNX5-213ENST00000486039 FLAD1Q8NFF5 587 aa26.24■■□□□ 1.79
SNX5-213ENST00000486039 RNMTO43148 476 aaKnown RBP26.23■■□□□ 1.79
SNX5-213ENST00000486039 DDX10Q13206 875 aaKnown RBP26.23■■□□□ 1.79
SNX5-213ENST00000486039 AK7Q96M32 723 aa26.23■■□□□ 1.79
SNX5-213ENST00000486039 SCN11AQ9UI33 1791 aa26.23■■□□□ 1.79
SNX5-213ENST00000486039 RBM42Q9BTD8 480 aaKnown RBP26.22■■□□□ 1.79
SNX5-213ENST00000486039 RSPH6AQ9H0K4 717 aa26.22■■□□□ 1.79
SNX5-213ENST00000486039 NUDCQ9Y266 331 aa26.22■■□□□ 1.79
SNX5-213ENST00000486039 GPR162Q16538 588 aa26.21■■□□□ 1.79
SNX5-213ENST00000486039 SMIM5Q71RC9 77 aa26.21■■□□□ 1.79
SNX5-213ENST00000486039 SLC52A2Q9HAB3 445 aa26.21■■□□□ 1.79
SNX5-213ENST00000486039 MSL1Q68DK7 614 aa26.2■■□□□ 1.78
SNX5-213ENST00000486039 PRKAR2BP31323 418 aa26.19■■□□□ 1.78
SNX5-213ENST00000486039 PHACTR3Q96KR7 559 aa26.19■■□□□ 1.78
SNX5-213ENST00000486039 MRC1P22897 1456 aa26.18■■□□□ 1.78
SNX5-213ENST00000486039 U2AF1L5P0DN76 240 aaPredicted RBP26.18■■□□□ 1.78
SNX5-213ENST00000486039 U2AF1Q01081 240 aaKnown RBP eCLIP26.18■■□□□ 1.78
SNX5-213ENST00000486039 NLGN2Q8NFZ4 835 aa26.18■■□□□ 1.78
SNX5-213ENST00000486039 GAS2L2Q8NHY3 880 aa26.18■■□□□ 1.78
SNX5-213ENST00000486039 ADAMTS7Q9UKP4 1686 aa26.18■■□□□ 1.78
SNX5-213ENST00000486039 PTCD1O75127 700 aaKnown RBP26.17■■□□□ 1.78
SNX5-213ENST00000486039 UTRNP46939 3433 aa26.17■■□□□ 1.78
SNX5-213ENST00000486039 ZNF831Q5JPB2 1677 aa26.16■■□□□ 1.78
SNX5-213ENST00000486039 PHF14O94880 888 aa26.16■■□□□ 1.78
SNX5-213ENST00000486039 UBR3Q6ZT12 1888 aa26.16■■□□□ 1.78
SNX5-213ENST00000486039 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.15■■□□□ 1.78
SNX5-213ENST00000486039 GNPATO15228 680 aa26.15■■□□□ 1.78
SNX5-213ENST00000486039 SSFA2P28290 1259 aa26.15■■□□□ 1.78
SNX5-213ENST00000486039 ZNF784Q8NCA9 323 aaPredicted RBP26.15■■□□□ 1.78
SNX5-213ENST00000486039 CHD4Q14839 1912 aa26.15■■□□□ 1.78
SNX5-213ENST00000486039 FCHSD2O94868 740 aa26.14■■□□□ 1.78
SNX5-213ENST00000486039 PELP1Q8IZL8 1130 aaKnown RBP26.14■■□□□ 1.78
SNX5-213ENST00000486039 IL17REQ8NFR9 667 aa26.14■■□□□ 1.78
SNX5-213ENST00000486039 GNAT3A8MTJ3 354 aa26.13■■□□□ 1.77
SNX5-213ENST00000486039 ZEB1P37275 1124 aaPredicted RBP26.13■■□□□ 1.77
SNX5-213ENST00000486039 SLC39A6Q13433 755 aa26.13■■□□□ 1.77
SNX5-213ENST00000486039 RALBP1Q15311 655 aa26.12■■□□□ 1.77
SNX5-213ENST00000486039 VIRMAQ69YN4 1812 aaKnown RBP26.11■■□□□ 1.77
SNX5-213ENST00000486039 RC3H1Q5TC82 1133 aaKnown RBP26.11■■□□□ 1.77
SNX5-213ENST00000486039 CNTNAP4Q9C0A0 1308 aa26.11■■□□□ 1.77
SNX5-213ENST00000486039 COL5A3P25940 1745 aaPredicted RBP26.1■■□□□ 1.77
SNX5-213ENST00000486039 CD2APQ9Y5K6 639 aa26.09■■□□□ 1.77
SNX5-213ENST00000486039 RTCBQ9Y3I0 505 aaKnown RBP26.08■■□□□ 1.77
SNX5-213ENST00000486039 TJP1Q07157 1748 aa26.06■■□□□ 1.76
SNX5-213ENST00000486039 KCPQ6ZWJ8 1503 aa26.06■■□□□ 1.76
SNX5-213ENST00000486039 RPS6KA4O75676 772 aa26.06■■□□□ 1.76
SNX5-213ENST00000486039 TRAPPC3LQ5T215 181 aa26.06■■□□□ 1.76
SNX5-213ENST00000486039 CICQ96RK0 1608 aaPredicted RBP26.06■■□□□ 1.76
SNX5-213ENST00000486039 CEMIPQ8WUJ3 1361 aa26.06■■□□□ 1.76
SNX5-213ENST00000486039 YBX3P16989 372 aaKnown RBP eCLIP26.05■■□□□ 1.76
SNX5-213ENST00000486039 CRKLP46109 303 aaKnown RBP26.05■■□□□ 1.76
SNX5-213ENST00000486039 TEFQ10587 303 aa26.05■■□□□ 1.76
SNX5-213ENST00000486039 DNAJC10Q8IXB1 793 aa26.05■■□□□ 1.76
SNX5-213ENST00000486039 GRIN3BO60391 1043 aa26.04■■□□□ 1.76
SNX5-213ENST00000486039 ARHGEF1Q92888 912 aaKnown RBP26.04■■□□□ 1.76
SNX5-213ENST00000486039 MYH14Q7Z406 1995 aaKnown RBP26.04■■□□□ 1.76
SNX5-213ENST00000486039 ADRA2BP18089 450 aa26.02■■□□□ 1.76
SNX5-213ENST00000486039 INTS5Q6P9B9 1019 aaKnown RBP26.02■■□□□ 1.76
SNX5-213ENST00000486039 PLEKHF1Q96S99 279 aa26.02■■□□□ 1.76
SNX5-213ENST00000486039 MYBBP1AQ9BQG0 1328 aaKnown RBP26.01■■□□□ 1.75
SNX5-213ENST00000486039 SIPA1L3O60292 1781 aaPredicted RBP26■■□□□ 1.75
SNX5-213ENST00000486039 ZNF790Q6PG37 636 aa26■■□□□ 1.75
SNX5-213ENST00000486039 MCM10Q7L590 875 aa26■■□□□ 1.75
SNX5-213ENST00000486039 TTC5Q8N0Z6 440 aa26■■□□□ 1.75
SNX5-213ENST00000486039 VSIG10Q8N0Z9 540 aa26■■□□□ 1.75
SNX5-213ENST00000486039 CYP19A1P11511 503 aaPredicted RBP25.99■■□□□ 1.75
SNX5-213ENST00000486039 RTF1Q92541 710 aaKnown RBP25.99■■□□□ 1.75
SNX5-213ENST00000486039 UBR2Q8IWV8 1755 aa25.99■■□□□ 1.75
SNX5-213ENST00000486039 GOLGB1Q14789 3259 aaKnown RBP25.99■■□□□ 1.75
SNX5-213ENST00000486039 DCTN1Q14203 1278 aa25.98■■□□□ 1.75
SNX5-213ENST00000486039 ZNF496Q96IT1 587 aaPredicted RBP25.98■■□□□ 1.75
SNX5-213ENST00000486039 HTATSF1O43719 755 aaKnown RBP25.97■■□□□ 1.75
SNX5-213ENST00000486039 RFC4P35249 363 aa25.97■■□□□ 1.75
SNX5-213ENST00000486039 CCDC87Q9NVE4 849 aa25.97■■□□□ 1.75
SNX5-213ENST00000486039 BTBD11A6QL63 1104 aa25.96■■□□□ 1.75
SNX5-213ENST00000486039 KCNQ3O43525 872 aa25.96■■□□□ 1.75
SNX5-213ENST00000486039 NEFMP07197 916 aa25.95■■□□□ 1.74
SNX5-213ENST00000486039 GYS1P13807 737 aa25.95■■□□□ 1.74
SNX5-213ENST00000486039 PRKRIP1Q9H875 184 aaPredicted RBP25.95■■□□□ 1.74
SNX5-213ENST00000486039 HEG1Q9ULI3 1381 aa25.95■■□□□ 1.74
SNX5-213ENST00000486039 NLGN1Q8N2Q7 840 aa25.94■■□□□ 1.74
SNX5-213ENST00000486039 ZBTB1Q9Y2K1 713 aa25.94■■□□□ 1.74
SNX5-213ENST00000486039 SOS1Q07889 1333 aaPredicted RBP25.93■■□□□ 1.74
SNX5-213ENST00000486039 MMP10P09238 476 aa25.93■■□□□ 1.74
SNX5-213ENST00000486039 PNNQ9H307 717 aaKnown RBP25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms