RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 BTG4Q9NY30 223 aa12.24□□□□□ -0.45
CTSA-208ENST00000485627 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.24□□□□□ -0.45
CTSA-208ENST00000485627 FAM208AQ9UK61 1670 aaKnown RBP12.24□□□□□ -0.45
CTSA-208ENST00000485627 CAMTA1Q9Y6Y1 1673 aa12.24□□□□□ -0.45
CTSA-208ENST00000485627 RGPD2P0DJD1 1756 aa12.23□□□□□ -0.45
CTSA-208ENST00000485627 ABCA3Q99758 1704 aa12.23□□□□□ -0.45
CTSA-208ENST00000485627 COL5A2P05997 1499 aaPredicted RBP12.23□□□□□ -0.45
CTSA-208ENST00000485627 CRB1P82279 1406 aa12.23□□□□□ -0.45
CTSA-208ENST00000485627 MS4A1P11836 297 aa12.23□□□□□ -0.45
CTSA-208ENST00000485627 BAG6P46379 1132 aa12.23□□□□□ -0.45
CTSA-208ENST00000485627 TEFQ10587 303 aa12.23□□□□□ -0.45
CTSA-208ENST00000485627 VPS72Q15906 364 aa12.23□□□□□ -0.45
CTSA-208ENST00000485627 TWISTNBQ3B726 338 aaPredicted RBP12.23□□□□□ -0.45
CTSA-208ENST00000485627 ALDH1L2Q3SY69 923 aa12.23□□□□□ -0.45
CTSA-208ENST00000485627 IL17REQ8NFR9 667 aa12.23□□□□□ -0.45
CTSA-208ENST00000485627 BCL2L13Q9BXK5 485 aa12.23□□□□□ -0.45
CTSA-208ENST00000485627 ELL2O00472 640 aaPredicted RBP12.22□□□□□ -0.45
CTSA-208ENST00000485627 IPO8O15397 1037 aaKnown RBP12.22□□□□□ -0.45
CTSA-208ENST00000485627 HSP90AB1P08238 724 aaKnown RBP12.22□□□□□ -0.45
CTSA-208ENST00000485627 YY1P25490 414 aa12.22□□□□□ -0.45
CTSA-208ENST00000485627 FAM98CQ17RN3 349 aaKnown RBP12.22□□□□□ -0.45
CTSA-208ENST00000485627 LMO7Q8WWI1 1683 aa12.22□□□□□ -0.45
CTSA-208ENST00000485627 KIF16BQ96L93 1317 aa12.21□□□□□ -0.45
CTSA-208ENST00000485627 RNMTO43148 476 aaKnown RBP12.21□□□□□ -0.45
CTSA-208ENST00000485627 ONECUT3O60422 494 aaPredicted RBP12.21□□□□□ -0.45
CTSA-208ENST00000485627 VAMP4O75379 141 aa12.21□□□□□ -0.45
CTSA-208ENST00000485627 IL2RBP14784 551 aa12.21□□□□□ -0.45
CTSA-208ENST00000485627 PDE3AQ14432 1141 aa12.21□□□□□ -0.45
CTSA-208ENST00000485627 ZKSCAN2Q63HK3 967 aa12.21□□□□□ -0.45
CTSA-208ENST00000485627 LARP1Q6PKG0 1096 aaKnown RBP12.21□□□□□ -0.45
CTSA-208ENST00000485627 MPRIPQ6WCQ1 1025 aa12.21□□□□□ -0.45
CTSA-208ENST00000485627 IFNL2Q8IZJ0 200 aa12.21□□□□□ -0.45
CTSA-208ENST00000485627 EXOC6Q8TAG9 804 aa12.21□□□□□ -0.45
CTSA-208ENST00000485627 SSH1Q8WYL5 1049 aa12.21□□□□□ -0.45
CTSA-208ENST00000485627 CRBNQ96SW2 442 aa12.21□□□□□ -0.45
CTSA-208ENST00000485627 ZNF219Q9P2Y4 722 aaPredicted RBP12.21□□□□□ -0.45
CTSA-208ENST00000485627 EZH2Q15910 746 aaKnown RBP12.2□□□□□ -0.46
CTSA-208ENST00000485627 FTSJ3Q8IY81 847 aaKnown RBP12.2□□□□□ -0.46
CTSA-208ENST00000485627 TSPYL6Q8N831 410 aa12.2□□□□□ -0.46
CTSA-208ENST00000485627 C8orf58Q8NAV2 365 aa12.2□□□□□ -0.46
CTSA-208ENST00000485627 CCDC136Q96JN2 1154 aa12.2□□□□□ -0.46
CTSA-208ENST00000485627 LGR6Q9HBX8 967 aa12.2□□□□□ -0.46
CTSA-208ENST00000485627 MIS18AQ9NYP9 233 aa12.2□□□□□ -0.46
CTSA-208ENST00000485627 COL14A1Q05707 1796 aaKnown RBP12.2□□□□□ -0.46
CTSA-208ENST00000485627 PLCH1Q4KWH8 1693 aa12.19□□□□□ -0.46
CTSA-208ENST00000485627 CEMIPQ8WUJ3 1361 aa12.19□□□□□ -0.46
CTSA-208ENST00000485627 PHKG2P15735 406 aa12.19□□□□□ -0.46
CTSA-208ENST00000485627 C20orf194Q5TEA3 1177 aa12.19□□□□□ -0.46
CTSA-208ENST00000485627 ZCRB1Q8TBF4 217 aaKnown RBP12.19□□□□□ -0.46
CTSA-208ENST00000485627 CHMP4AQ9BY43 222 aa12.19□□□□□ -0.46
CTSA-208ENST00000485627 USP35Q9P2H5 1018 aa12.19□□□□□ -0.46
CTSA-208ENST00000485627 MEGF6O75095 1541 aa12.19□□□□□ -0.46
CTSA-208ENST00000485627 OVOS2A0A0G2JMS6 1433 aa12.19□□□□□ -0.46
CTSA-208ENST00000485627 BTBD11A6QL63 1104 aa12.18□□□□□ -0.46
CTSA-208ENST00000485627 SOS1Q07889 1333 aaPredicted RBP12.17□□□□□ -0.46
CTSA-208ENST00000485627 PCDH11XQ9BZA7 1347 aa12.17□□□□□ -0.46
CTSA-208ENST00000485627 PCDH11YQ9BZA8 1340 aa12.17□□□□□ -0.46
CTSA-208ENST00000485627 BRPF1P55201 1214 aaPredicted RBP12.17□□□□□ -0.46
CTSA-208ENST00000485627 B4GALNT3Q6L9W6 998 aa12.17□□□□□ -0.46
CTSA-208ENST00000485627 DZIP1LQ8IYY4 767 aaKnown RBP12.17□□□□□ -0.46
CTSA-208ENST00000485627 DCAF5Q96JK2 942 aa12.17□□□□□ -0.46
CTSA-208ENST00000485627 NOB1Q9ULX3 412 aaKnown RBP12.17□□□□□ -0.46
CTSA-208ENST00000485627 LRRC37A3O60309 1634 aa12.16□□□□□ -0.46
CTSA-208ENST00000485627 ATF7IPQ6VMQ6 1270 aa12.16□□□□□ -0.46
CTSA-208ENST00000485627 MRPL50Q8N5N7 158 aaKnown RBP12.16□□□□□ -0.46
CTSA-208ENST00000485627 CYP27B1O15528 508 aa12.15□□□□□ -0.46
CTSA-208ENST00000485627 KRT24Q2M2I5 525 aa12.15□□□□□ -0.46
CTSA-208ENST00000485627 CCDC30Q5VVM6 783 aa12.15□□□□□ -0.46
CTSA-208ENST00000485627 PANK1Q8TE04 598 aa12.15□□□□□ -0.46
CTSA-208ENST00000485627 CLUAP1Q96AJ1 413 aa12.15□□□□□ -0.46
CTSA-208ENST00000485627 STK31Q9BXU1 1019 aa12.15□□□□□ -0.46
CTSA-208ENST00000485627 TCERG1O14776 1098 aaKnown RBP12.14□□□□□ -0.47
CTSA-208ENST00000485627 TRIM37O94972 964 aa12.14□□□□□ -0.47
CTSA-208ENST00000485627 CABP4P57796 275 aa12.14□□□□□ -0.47
CTSA-208ENST00000485627 AAMPQ13685 434 aa12.14□□□□□ -0.47
CTSA-208ENST00000485627 DDX54Q8TDD1 881 aaKnown RBP12.14□□□□□ -0.47
CTSA-208ENST00000485627 ARHGAP45Q92619 1136 aa12.14□□□□□ -0.47
CTSA-208ENST00000485627 API5Q9BZZ5 524 aaKnown RBP12.14□□□□□ -0.47
CTSA-208ENST00000485627 SLC52A2Q9HAB3 445 aa12.14□□□□□ -0.47
CTSA-208ENST00000485627 COG6Q9Y2V7 657 aa12.14□□□□□ -0.47
CTSA-208ENST00000485627 PARP4Q9UKK3 1724 aaKnown RBP12.14□□□□□ -0.47
CTSA-208ENST00000485627 HOXB7P09629 217 aa12.13□□□□□ -0.47
CTSA-208ENST00000485627 TRIM27P14373 513 aa12.13□□□□□ -0.47
CTSA-208ENST00000485627 EIF4A1P60842 406 aaKnown RBP12.13□□□□□ -0.47
CTSA-208ENST00000485627 CAMKK2Q96RR4 588 aa12.13□□□□□ -0.47
CTSA-208ENST00000485627 CDCA7Q9BWT1 371 aaPredicted RBP12.13□□□□□ -0.47
CTSA-208ENST00000485627 THRAP3Q9Y2W1 955 aaKnown RBP12.13□□□□□ -0.47
CTSA-208ENST00000485627 NRAPQ86VF7 1730 aa12.12□□□□□ -0.47
CTSA-208ENST00000485627 TNS1Q9HBL0 1735 aaKnown RBP12.12□□□□□ -0.47
CTSA-208ENST00000485627 NWD2Q9ULI1 1742 aa12.12□□□□□ -0.47
CTSA-208ENST00000485627 EXOC5O00471 708 aa12.12□□□□□ -0.47
CTSA-208ENST00000485627 MVPQ14764 893 aaKnown RBP12.12□□□□□ -0.47
CTSA-208ENST00000485627 ITPRIPQ8IWB1 547 aa12.12□□□□□ -0.47
CTSA-208ENST00000485627 TTC5Q8N0Z6 440 aa12.12□□□□□ -0.47
CTSA-208ENST00000485627 CHMP4BQ9H444 224 aaKnown RBP12.12□□□□□ -0.47
CTSA-208ENST00000485627 PKD1L3Q7Z443 1732 aa12.11□□□□□ -0.47
CTSA-208ENST00000485627 ERVV-2B6SEH9 535 aa12.11□□□□□ -0.47
CTSA-208ENST00000485627 RLBP1P12271 317 aa12.11□□□□□ -0.47
CTSA-208ENST00000485627 HDGFL1Q5TGJ6 251 aa12.11□□□□□ -0.47
CTSA-208ENST00000485627 NFATC2IPQ8NCF5 419 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms