RNA–Protein interactions for RNA: ENST00000485578.1

PKDCC-207, Transcript of protein kinase domain containing, cytoplasmic, humanhuman

TSL 2

Gene PKDCC, Length 563 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKDCC-207ENST00000485578 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.86■□□□□ 0.61
PKDCC-207ENST00000485578 QSER1Q2KHR3 1735 aa18.86■□□□□ 0.61
PKDCC-207ENST00000485578 ADAMTS7Q9UKP4 1686 aa18.85■□□□□ 0.61
PKDCC-207ENST00000485578 PALLDQ8WX93 1383 aa18.85■□□□□ 0.61
PKDCC-207ENST00000485578 U2AF1L5P0DN76 240 aaPredicted RBP18.85■□□□□ 0.61
PKDCC-207ENST00000485578 HMGB2P26583 209 aaKnown RBP18.85■□□□□ 0.61
PKDCC-207ENST00000485578 PRKAR2BP31323 418 aa18.85■□□□□ 0.61
PKDCC-207ENST00000485578 U2AF1Q01081 240 aaKnown RBP eCLIP18.85■□□□□ 0.61
PKDCC-207ENST00000485578 PHACTR3Q96KR7 559 aa18.85■□□□□ 0.61
PKDCC-207ENST00000485578 ASAP1Q9ULH1 1129 aa18.85■□□□□ 0.61
PKDCC-207ENST00000485578 SIPA1L3O60292 1781 aaPredicted RBP18.85■□□□□ 0.61
PKDCC-207ENST00000485578 PNPLA7Q6ZV29 1317 aa18.84■□□□□ 0.61
PKDCC-207ENST00000485578 C1orf141Q5JVX7 400 aa18.84■□□□□ 0.61
PKDCC-207ENST00000485578 SMIM5Q71RC9 77 aa18.84■□□□□ 0.61
PKDCC-207ENST00000485578 RSPH6AQ9H0K4 717 aa18.84■□□□□ 0.61
PKDCC-207ENST00000485578 LGR6Q9HBX8 967 aa18.84■□□□□ 0.61
PKDCC-207ENST00000485578 TMOD3Q9NYL9 352 aa18.83■□□□□ 0.6
PKDCC-207ENST00000485578 AMOTQ4VCS5 1084 aa18.82■□□□□ 0.6
PKDCC-207ENST00000485578 IFFO2Q5TF58 517 aa18.82■□□□□ 0.6
PKDCC-207ENST00000485578 CCNL1Q9UK58 526 aaPredicted RBP18.82■□□□□ 0.6
PKDCC-207ENST00000485578 C4BP0C0L5 1744 aa18.82■□□□□ 0.6
PKDCC-207ENST00000485578 TJP1Q07157 1748 aa18.82■□□□□ 0.6
PKDCC-207ENST00000485578 COL5A3P25940 1745 aaPredicted RBP18.8■□□□□ 0.6
PKDCC-207ENST00000485578 UBR3Q6ZT12 1888 aa18.8■□□□□ 0.6
PKDCC-207ENST00000485578 MYBBP1AQ9BQG0 1328 aaKnown RBP18.79■□□□□ 0.6
PKDCC-207ENST00000485578 MRC1P22897 1456 aa18.79■□□□□ 0.6
PKDCC-207ENST00000485578 RALBP1Q15311 655 aa18.79■□□□□ 0.6
PKDCC-207ENST00000485578 NLGN2Q8NFZ4 835 aa18.79■□□□□ 0.6
PKDCC-207ENST00000485578 DCAF5Q96JK2 942 aa18.79■□□□□ 0.6
PKDCC-207ENST00000485578 ATG3Q9NT62 314 aa18.79■□□□□ 0.6
PKDCC-207ENST00000485578 CABP4P57796 275 aa18.78■□□□□ 0.6
PKDCC-207ENST00000485578 AKAP4Q5JQC9 854 aa18.78■□□□□ 0.6
PKDCC-207ENST00000485578 PRKRIP1Q9H875 184 aaPredicted RBP18.78■□□□□ 0.6
PKDCC-207ENST00000485578 NUDCQ9Y266 331 aa18.78■□□□□ 0.6
PKDCC-207ENST00000485578 MYH14Q7Z406 1995 aaKnown RBP18.77■□□□□ 0.6
PKDCC-207ENST00000485578 RNMTO43148 476 aaKnown RBP18.77■□□□□ 0.6
PKDCC-207ENST00000485578 CCDC184Q52MB2 194 aa18.77■□□□□ 0.6
PKDCC-207ENST00000485578 AMIGO3Q86WK7 504 aa18.77■□□□□ 0.6
PKDCC-207ENST00000485578 NFATC2IPQ8NCF5 419 aa18.77■□□□□ 0.6
PKDCC-207ENST00000485578 UBR2Q8IWV8 1755 aa18.77■□□□□ 0.6
PKDCC-207ENST00000485578 PLEKHG2Q9H7P9 1386 aa18.77■□□□□ 0.6
PKDCC-207ENST00000485578 ITPK1Q13572 414 aa18.76■□□□□ 0.59
PKDCC-207ENST00000485578 SLC4A9Q96Q91 983 aa18.76■□□□□ 0.59
PKDCC-207ENST00000485578 GPBP1L1Q9HC44 474 aaPredicted RBP18.76■□□□□ 0.59
PKDCC-207ENST00000485578 COL24A1Q17RW2 1714 aa18.75■□□□□ 0.59
PKDCC-207ENST00000485578 HSP90AB1P08238 724 aaKnown RBP18.75■□□□□ 0.59
PKDCC-207ENST00000485578 SLC39A6Q13433 755 aa18.75■□□□□ 0.59
PKDCC-207ENST00000485578 DCTN1Q14203 1278 aa18.75■□□□□ 0.59
PKDCC-207ENST00000485578 LINC00116Q8NCU8 138 aa18.75■□□□□ 0.59
PKDCC-207ENST00000485578 RBM42Q9BTD8 480 aaKnown RBP18.75■□□□□ 0.59
PKDCC-207ENST00000485578 ERVV-2B6SEH9 535 aa18.74■□□□□ 0.59
PKDCC-207ENST00000485578 PTCD1O75127 700 aaKnown RBP18.74■□□□□ 0.59
PKDCC-207ENST00000485578 CCDC146Q8IYE0 955 aa18.74■□□□□ 0.59
PKDCC-207ENST00000485578 FLAD1Q8NFF5 587 aa18.74■□□□□ 0.59
PKDCC-207ENST00000485578 KCPQ6ZWJ8 1503 aa18.74■□□□□ 0.59
PKDCC-207ENST00000485578 LOC102724428A0A0B4J2F2 783 aa18.73■□□□□ 0.59
PKDCC-207ENST00000485578 YBX3P16989 372 aaKnown RBP eCLIP18.73■□□□□ 0.59
PKDCC-207ENST00000485578 SIK1P57059 783 aa18.73■□□□□ 0.59
PKDCC-207ENST00000485578 IL17REQ8NFR9 667 aa18.73■□□□□ 0.59
PKDCC-207ENST00000485578 GOLGB1Q14789 3259 aaKnown RBP18.73■□□□□ 0.59
PKDCC-207ENST00000485578 ATP10DQ9P241 1426 aa18.73■□□□□ 0.59
PKDCC-207ENST00000485578 MSL1Q68DK7 614 aa18.72■□□□□ 0.59
PKDCC-207ENST00000485578 MCM10Q7L590 875 aa18.72■□□□□ 0.59
PKDCC-207ENST00000485578 C4AP0C0L4 1744 aa18.71■□□□□ 0.59
PKDCC-207ENST00000485578 ZNF831Q5JPB2 1677 aa18.71■□□□□ 0.59
PKDCC-207ENST00000485578 PHF14O94880 888 aa18.71■□□□□ 0.59
PKDCC-207ENST00000485578 COL23A1Q86Y22 540 aaPredicted RBP18.71■□□□□ 0.59
PKDCC-207ENST00000485578 SMARCC1Q92922 1105 aaPredicted RBP18.71■□□□□ 0.59
PKDCC-207ENST00000485578 SLC52A2Q9HAB3 445 aa18.71■□□□□ 0.59
PKDCC-207ENST00000485578 CD2APQ9Y5K6 639 aa18.71■□□□□ 0.59
PKDCC-207ENST00000485578 GNAT3A8MTJ3 354 aa18.7■□□□□ 0.58
PKDCC-207ENST00000485578 ATP6V1AP38606 617 aa18.7■□□□□ 0.58
PKDCC-207ENST00000485578 GAS2L2Q8NHY3 880 aa18.7■□□□□ 0.58
PKDCC-207ENST00000485578 PLEKHF1Q96S99 279 aa18.7■□□□□ 0.58
PKDCC-207ENST00000485578 THUMPD2Q9BTF0 503 aaKnown RBP18.7■□□□□ 0.58
PKDCC-207ENST00000485578 FCHSD2O94868 740 aa18.69■□□□□ 0.58
PKDCC-207ENST00000485578 DIEXFQ68CQ4 756 aaKnown RBP18.69■□□□□ 0.58
PKDCC-207ENST00000485578 RRP7AQ9Y3A4 280 aaKnown RBP18.69■□□□□ 0.58
PKDCC-207ENST00000485578 KCNQ3O43525 872 aa18.68■□□□□ 0.58
PKDCC-207ENST00000485578 CICQ96RK0 1608 aaPredicted RBP18.67■□□□□ 0.58
PKDCC-207ENST00000485578 ZNF526Q8TF50 670 aaPredicted RBP18.67■□□□□ 0.58
PKDCC-207ENST00000485578 AK7Q96M32 723 aa18.67■□□□□ 0.58
PKDCC-207ENST00000485578 KDM3BQ7LBC6 1761 aa18.67■□□□□ 0.58
PKDCC-207ENST00000485578 HSPA6P17066 643 aa18.65■□□□□ 0.58
PKDCC-207ENST00000485578 GNPATO15228 680 aa18.64■□□□□ 0.57
PKDCC-207ENST00000485578 TEFQ10587 303 aa18.64■□□□□ 0.57
PKDCC-207ENST00000485578 WDR43Q15061 677 aaKnown RBP eCLIP18.64■□□□□ 0.57
PKDCC-207ENST00000485578 DNAJC10Q8IXB1 793 aa18.64■□□□□ 0.57
PKDCC-207ENST00000485578 MIS18AQ9NYP9 233 aa18.64■□□□□ 0.57
PKDCC-207ENST00000485578 ADAMTS8Q9UP79 889 aa18.64■□□□□ 0.57
PKDCC-207ENST00000485578 MAPK8IP3Q9UPT6 1336 aa18.64■□□□□ 0.57
PKDCC-207ENST00000485578 CEMIPQ8WUJ3 1361 aa18.64■□□□□ 0.57
PKDCC-207ENST00000485578 NFE2L2Q16236 605 aa18.63■□□□□ 0.57
PKDCC-207ENST00000485578 NEUROD2Q15784 382 aa18.62■□□□□ 0.57
PKDCC-207ENST00000485578 CEP350Q5VT06 3117 aa18.61■□□□□ 0.57
PKDCC-207ENST00000485578 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.61■□□□□ 0.57
PKDCC-207ENST00000485578 RTF1Q92541 710 aaKnown RBP18.61■□□□□ 0.57
PKDCC-207ENST00000485578 PRAMEF22A3QJZ6 481 aa18.6■□□□□ 0.57
PKDCC-207ENST00000485578 ANP32CO43423 234 aa18.6■□□□□ 0.57
PKDCC-207ENST00000485578 ZNF496Q96IT1 587 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms