RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 ATP6V1AP38606 617 aa35.01■■■■□ 3.2
HLA-F-227ENST00000485513 ITPK1Q13572 414 aa35■■■■□ 3.19
HLA-F-227ENST00000485513 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.99■■■■□ 3.19
HLA-F-227ENST00000485513 SULT6B1Q6IMI4 303 aa34.99■■■■□ 3.19
HLA-F-227ENST00000485513 SSFA2P28290 1259 aa34.98■■■■□ 3.19
HLA-F-227ENST00000485513 IL13P35225 146 aa34.98■■■■□ 3.19
HLA-F-227ENST00000485513 SMIM5Q71RC9 77 aa34.98■■■■□ 3.19
HLA-F-227ENST00000485513 PELP1Q8IZL8 1130 aaKnown RBP34.98■■■■□ 3.19
HLA-F-227ENST00000485513 KDM6AO15550 1401 aaPredicted RBP34.97■■■■□ 3.19
HLA-F-227ENST00000485513 C1orf141Q5JVX7 400 aa34.96■■■■□ 3.19
HLA-F-227ENST00000485513 KDRP35968 1356 aa34.96■■■■□ 3.19
HLA-F-227ENST00000485513 GNPATO15228 680 aa34.94■■■■□ 3.18
HLA-F-227ENST00000485513 PER1O15534 1290 aaPredicted RBP34.94■■■■□ 3.18
HLA-F-227ENST00000485513 CABP4P57796 275 aa34.94■■■■□ 3.18
HLA-F-227ENST00000485513 MTHFSP49914 203 aa34.93■■■■□ 3.18
HLA-F-227ENST00000485513 ZNF784Q8NCA9 323 aaPredicted RBP34.93■■■■□ 3.18
HLA-F-227ENST00000485513 RBM42Q9BTD8 480 aaKnown RBP34.92■■■■□ 3.18
HLA-F-227ENST00000485513 ZNF831Q5JPB2 1677 aa34.9■■■■□ 3.18
HLA-F-227ENST00000485513 CD2APQ9Y5K6 639 aa34.9■■■■□ 3.18
HLA-F-227ENST00000485513 CC2D1BQ5T0F9 858 aaKnown RBP34.89■■■■□ 3.18
HLA-F-227ENST00000485513 SLC4A9Q96Q91 983 aa34.89■■■■□ 3.18
HLA-F-227ENST00000485513 GOLGB1Q14789 3259 aaKnown RBP34.88■■■■□ 3.17
HLA-F-227ENST00000485513 YBX3P16989 372 aaKnown RBP eCLIP34.84■■■■□ 3.17
HLA-F-227ENST00000485513 GRIN3BO60391 1043 aa34.83■■■■□ 3.17
HLA-F-227ENST00000485513 NFATC2IPQ8NCF5 419 aa34.83■■■■□ 3.17
HLA-F-227ENST00000485513 RTCBQ9Y3I0 505 aaKnown RBP34.83■■■■□ 3.17
HLA-F-227ENST00000485513 COL5A3P25940 1745 aaPredicted RBP34.83■■■■□ 3.17
HLA-F-227ENST00000485513 SCN11AQ9UI33 1791 aa34.82■■■■□ 3.17
HLA-F-227ENST00000485513 RC3H1Q5TC82 1133 aaKnown RBP34.82■■■■□ 3.16
HLA-F-227ENST00000485513 HMOX1P09601 288 aa34.81■■■■□ 3.16
HLA-F-227ENST00000485513 AKAP4Q5JQC9 854 aa34.81■■■■□ 3.16
HLA-F-227ENST00000485513 PTCD1O75127 700 aaKnown RBP34.8■■■■□ 3.16
HLA-F-227ENST00000485513 TRAPPC3LQ5T215 181 aa34.8■■■■□ 3.16
HLA-F-227ENST00000485513 CNTNAP4Q9C0A0 1308 aa34.8■■■■□ 3.16
HLA-F-227ENST00000485513 NPC1L1Q9UHC9 1359 aa34.79■■■■□ 3.16
HLA-F-227ENST00000485513 DIAPH1O60610 1272 aaKnown RBP34.79■■■■□ 3.16
HLA-F-227ENST00000485513 ADRA2BP18089 450 aa34.76■■■■□ 3.16
HLA-F-227ENST00000485513 CNGB1Q14028 1251 aaPredicted RBP34.76■■■■□ 3.16
HLA-F-227ENST00000485513 RPS6KA4O75676 772 aa34.75■■■■□ 3.15
HLA-F-227ENST00000485513 MYH14Q7Z406 1995 aaKnown RBP34.74■■■■□ 3.15
HLA-F-227ENST00000485513 MMP10P09238 476 aa34.74■■■■□ 3.15
HLA-F-227ENST00000485513 ARHGEF1Q92888 912 aaKnown RBP34.74■■■■□ 3.15
HLA-F-227ENST00000485513 SLC52A2Q9HAB3 445 aa34.72■■■■□ 3.15
HLA-F-227ENST00000485513 LGR6Q9HBX8 967 aa34.72■■■■□ 3.15
HLA-F-227ENST00000485513 NLGN1Q8N2Q7 840 aa34.71■■■■□ 3.15
HLA-F-227ENST00000485513 RNMTO43148 476 aaKnown RBP34.7■■■■□ 3.15
HLA-F-227ENST00000485513 RFC4P35249 363 aa34.7■■■■□ 3.15
HLA-F-227ENST00000485513 VIRMAQ69YN4 1812 aaKnown RBP34.69■■■■□ 3.14
HLA-F-227ENST00000485513 CRKLP46109 303 aaKnown RBP34.69■■■■□ 3.14
HLA-F-227ENST00000485513 MTHFSDQ2M296 383 aaKnown RBP34.69■■■■□ 3.14
HLA-F-227ENST00000485513 COL3A1P02461 1466 aaPredicted RBP34.69■■■■□ 3.14
HLA-F-227ENST00000485513 CICQ96RK0 1608 aaPredicted RBP34.69■■■■□ 3.14
HLA-F-227ENST00000485513 TJP1Q07157 1748 aa34.69■■■■□ 3.14
HLA-F-227ENST00000485513 MRC1P22897 1456 aa34.67■■■■□ 3.14
HLA-F-227ENST00000485513 C4AP0C0L4 1744 aa34.67■■■■□ 3.14
HLA-F-227ENST00000485513 GYS1P13807 737 aa34.66■■■■□ 3.14
HLA-F-227ENST00000485513 U2SURPO15042 1029 aaKnown RBP34.64■■■■□ 3.14
HLA-F-227ENST00000485513 WWC3Q9ULE0 1092 aa34.64■■■■□ 3.14
HLA-F-227ENST00000485513 ADAMTS7Q9UKP4 1686 aa34.63■■■■□ 3.13
HLA-F-227ENST00000485513 KIF13BQ9NQT8 1826 aa34.62■■■■□ 3.13
HLA-F-227ENST00000485513 SLC39A6Q13433 755 aa34.61■■■■□ 3.13
HLA-F-227ENST00000485513 DNAJC10Q8IXB1 793 aa34.6■■■■□ 3.13
HLA-F-227ENST00000485513 INTS5Q6P9B9 1019 aaKnown RBP34.59■■■■□ 3.13
HLA-F-227ENST00000485513 CCDC87Q9NVE4 849 aa34.58■■■■□ 3.13
HLA-F-227ENST00000485513 PARP3Q9Y6F1 533 aa34.58■■■■□ 3.13
HLA-F-227ENST00000485513 C10orf71Q711Q0 1435 aa34.57■■■■□ 3.13
HLA-F-227ENST00000485513 SRP68Q9UHB9 627 aaKnown RBP34.57■■■■□ 3.12
HLA-F-227ENST00000485513 PXDNLA1KZ92 1463 aa34.57■■■■□ 3.12
HLA-F-227ENST00000485513 USP42Q9H9J4 1324 aaKnown RBP34.56■■■■□ 3.12
HLA-F-227ENST00000485513 KCPQ6ZWJ8 1503 aa34.56■■■■□ 3.12
HLA-F-227ENST00000485513 TGFB2P61812 414 aa34.56■■■■□ 3.12
HLA-F-227ENST00000485513 C1QTNF8P60827 252 aa34.55■■■■□ 3.12
HLA-F-227ENST00000485513 CFAP53Q96M91 514 aa34.55■■■■□ 3.12
HLA-F-227ENST00000485513 KIAA1551Q9HCM1 1747 aa34.55■■■■□ 3.12
HLA-F-227ENST00000485513 N4BP2Q86UW6 1770 aaPredicted RBP34.54■■■■□ 3.12
HLA-F-227ENST00000485513 GAS2L2Q8NHY3 880 aa34.54■■■■□ 3.12
HLA-F-227ENST00000485513 GIGYF1O75420 1035 aaPredicted RBP34.53■■■■□ 3.12
HLA-F-227ENST00000485513 CYP19A1P11511 503 aaPredicted RBP34.53■■■■□ 3.12
HLA-F-227ENST00000485513 FKBP8Q14318 412 aa34.52■■■■□ 3.12
HLA-F-227ENST00000485513 A0A0G2JLW4 131 aa34.51■■■■□ 3.12
HLA-F-227ENST00000485513 GNAT3A8MTJ3 354 aa34.51■■■■□ 3.12
HLA-F-227ENST00000485513 ATP10DQ9P241 1426 aa34.51■■■■□ 3.12
HLA-F-227ENST00000485513 VSIG10Q8N0Z9 540 aa34.5■■■■□ 3.11
HLA-F-227ENST00000485513 SOS1Q07889 1333 aaPredicted RBP34.5■■■■□ 3.11
HLA-F-227ENST00000485513 UBR2Q8IWV8 1755 aa34.49■■■■□ 3.11
HLA-F-227ENST00000485513 ZPR1O75312 459 aa34.48■■■■□ 3.11
HLA-F-227ENST00000485513 TEFQ10587 303 aa34.48■■■■□ 3.11
HLA-F-227ENST00000485513 TTC5Q8N0Z6 440 aa34.48■■■■□ 3.11
HLA-F-227ENST00000485513 IL17REQ8NFR9 667 aa34.48■■■■□ 3.11
HLA-F-227ENST00000485513 ADCY9O60503 1353 aa34.47■■■■□ 3.11
HLA-F-227ENST00000485513 DPEP1P16444 411 aa34.46■■■■□ 3.11
HLA-F-227ENST00000485513 DDR1Q08345 913 aa34.46■■■■□ 3.11
HLA-F-227ENST00000485513 NUDCQ9Y266 331 aa34.46■■■■□ 3.11
HLA-F-227ENST00000485513 BCS1LQ9Y276 419 aa34.46■■■■□ 3.11
HLA-F-227ENST00000485513 ZBTB1Q9Y2K1 713 aa34.46■■■■□ 3.11
HLA-F-227ENST00000485513 PPP2R1AP30153 589 aa34.45■■■■□ 3.11
HLA-F-227ENST00000485513 PRKAR2BP31323 418 aa34.45■■■■□ 3.11
HLA-F-227ENST00000485513 USPL1Q5W0Q7 1092 aa34.45■■■■□ 3.11
HLA-F-227ENST00000485513 RSPH6AQ9H0K4 717 aa34.44■■■■□ 3.1
HLA-F-227ENST00000485513 PHACTR3Q96KR7 559 aa34.43■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms