RNA–Protein interactions for RNA: ENST00000485454.1

SFPQ-209, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 339 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-209ENST00000485454 TAS1R3Q7RTX0 852 aa7□□□□□ -1.29
SFPQ-209ENST00000485454 DEPDC4Q8N2C3 294 aa7□□□□□ -1.29
SFPQ-209ENST00000485454 SVOPQ8N4V2 548 aa7□□□□□ -1.29
SFPQ-209ENST00000485454 NBPF15Q8N660 670 aa7□□□□□ -1.29
SFPQ-209ENST00000485454 FHDC1Q9C0D6 1143 aaPredicted RBP7□□□□□ -1.29
SFPQ-209ENST00000485454 PCDHGA11Q9Y5H2 935 aa7□□□□□ -1.29
SFPQ-209ENST00000485454 WASLO00401 505 aaPredicted RBP6.99□□□□□ -1.29
SFPQ-209ENST00000485454 GTF2IP78347 998 aa6.99□□□□□ -1.29
SFPQ-209ENST00000485454 TLR1Q15399 786 aa6.99□□□□□ -1.29
SFPQ-209ENST00000485454 TMEM214Q6NUQ4 689 aaKnown RBP6.99□□□□□ -1.29
SFPQ-209ENST00000485454 PLEKHM2Q8IWE5 1019 aa6.99□□□□□ -1.29
SFPQ-209ENST00000485454 ADAMTS8Q9UP79 889 aa6.99□□□□□ -1.29
SFPQ-209ENST00000485454 DYRK1BQ9Y463 629 aa6.99□□□□□ -1.29
SFPQ-209ENST00000485454 USP17L3A6NCW0 530 aa6.98□□□□□ -1.29
SFPQ-209ENST00000485454 USP17L4A6NCW7 530 aa6.98□□□□□ -1.29
SFPQ-209ENST00000485454 GNASQ5JWF2 1037 aa6.98□□□□□ -1.29
SFPQ-209ENST00000485454 ZNF385CQ66K41 422 aaPredicted RBP6.98□□□□□ -1.29
SFPQ-209ENST00000485454 USP17L2Q6R6M4 530 aa6.98□□□□□ -1.29
SFPQ-209ENST00000485454 USP17L1Q7RTZ2 530 aa6.98□□□□□ -1.29
SFPQ-209ENST00000485454 CALR3Q96L12 384 aaKnown RBP6.98□□□□□ -1.29
SFPQ-209ENST00000485454 TIMMDC1Q9NPL8 285 aa6.98□□□□□ -1.29
SFPQ-209ENST00000485454 TMEM229AB2RXF0 380 aa6.97□□□□□ -1.29
SFPQ-209ENST00000485454 PSME1Q06323 249 aa6.97□□□□□ -1.29
SFPQ-209ENST00000485454 TRIM50Q86XT4 487 aa6.97□□□□□ -1.29
SFPQ-209ENST00000485454 PPARGC1BQ86YN6 1023 aaKnown RBP6.97□□□□□ -1.29
SFPQ-209ENST00000485454 GAS2L1Q99501 681 aaPredicted RBP6.97□□□□□ -1.29
SFPQ-209ENST00000485454 GTF3C3Q9Y5Q9 886 aa6.97□□□□□ -1.29
SFPQ-209ENST00000485454 SLURP2P0DP57 97 aa6.96□□□□□ -1.3
SFPQ-209ENST00000485454 PHKA2P46019 1235 aa6.96□□□□□ -1.3
SFPQ-209ENST00000485454 GSK3AP49840 483 aa6.96□□□□□ -1.3
SFPQ-209ENST00000485454 SMTNP53814 917 aa6.96□□□□□ -1.3
SFPQ-209ENST00000485454 C4orf17Q53FE4 359 aa6.96□□□□□ -1.3
SFPQ-209ENST00000485454 RIPOR1Q6ZS17 1223 aa6.96□□□□□ -1.3
SFPQ-209ENST00000485454 TMEM151AQ8N4L1 468 aa6.96□□□□□ -1.3
SFPQ-209ENST00000485454 KCTD17Q8N5Z5 321 aa6.96□□□□□ -1.3
SFPQ-209ENST00000485454 RHBDD1Q8TEB9 315 aa6.96□□□□□ -1.3
SFPQ-209ENST00000485454 GMCL1Q96IK5 515 aa6.96□□□□□ -1.3
SFPQ-209ENST00000485454 SLC4A9Q96Q91 983 aa6.96□□□□□ -1.3
SFPQ-209ENST00000485454 CUEDC1Q9NWM3 386 aaPredicted RBP6.96□□□□□ -1.3
SFPQ-209ENST00000485454 TFIP11Q9UBB9 837 aaKnown RBP6.96□□□□□ -1.3
SFPQ-209ENST00000485454 SERTAD1Q9UHV2 236 aa6.96□□□□□ -1.3
SFPQ-209ENST00000485454 H7C1W4 665 aa6.95□□□□□ -1.3
SFPQ-209ENST00000485454 GDF11O95390 407 aa6.95□□□□□ -1.3
SFPQ-209ENST00000485454 ATP1A2P50993 1020 aa6.95□□□□□ -1.3
SFPQ-209ENST00000485454 RASSF7Q02833 373 aa6.95□□□□□ -1.3
SFPQ-209ENST00000485454 TRIM22Q8IYM9 498 aa6.95□□□□□ -1.3
SFPQ-209ENST00000485454 WHAMMQ8TF30 809 aa6.95□□□□□ -1.3
SFPQ-209ENST00000485454 MKRN1Q9UHC7 482 aaKnown RBP6.95□□□□□ -1.3
SFPQ-209ENST00000485454 ZNF777Q9ULD5 760 aaPredicted RBP6.95□□□□□ -1.3
SFPQ-209ENST00000485454 A0A1B0GTH6 734 aa6.94□□□□□ -1.3
SFPQ-209ENST00000485454 PALM3A6NDB9 673 aaPredicted RBP6.94□□□□□ -1.3
SFPQ-209ENST00000485454 A6NJY4 79 aa6.94□□□□□ -1.3
SFPQ-209ENST00000485454 BACH1O14867 736 aa6.94□□□□□ -1.3
SFPQ-209ENST00000485454 F11P03951 625 aa6.94□□□□□ -1.3
SFPQ-209ENST00000485454 MTFR1Q15390 333 aa6.94□□□□□ -1.3
SFPQ-209ENST00000485454 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.94□□□□□ -1.3
SFPQ-209ENST00000485454 PPP1R12CQ9BZL4 782 aa6.94□□□□□ -1.3
SFPQ-209ENST00000485454 MAFBQ9Y5Q3 323 aaPredicted RBP6.94□□□□□ -1.3
SFPQ-209ENST00000485454 ZBTB7BO15156 539 aaPredicted RBP6.93□□□□□ -1.3
SFPQ-209ENST00000485454 ADAMTS2O95450 1211 aa6.93□□□□□ -1.3
SFPQ-209ENST00000485454 CLDN10P78369 228 aa6.93□□□□□ -1.3
SFPQ-209ENST00000485454 DBN1Q16643 649 aa6.93□□□□□ -1.3
SFPQ-209ENST00000485454 OGFOD1Q8N543 542 aa6.93□□□□□ -1.3
SFPQ-209ENST00000485454 ZNF837Q96EG3 531 aaPredicted RBP6.93□□□□□ -1.3
SFPQ-209ENST00000485454 ZMYND15Q9H091 742 aa6.93□□□□□ -1.3
SFPQ-209ENST00000485454 DNAAF2Q9NVR5 837 aaKnown RBP6.93□□□□□ -1.3
SFPQ-209ENST00000485454 ZNF358Q9NW07 568 aa6.93□□□□□ -1.3
SFPQ-209ENST00000485454 CDK2AP1O14519 115 aa6.92□□□□□ -1.3
SFPQ-209ENST00000485454 MARSP56192 900 aaKnown RBP6.92□□□□□ -1.3
SFPQ-209ENST00000485454 SRSF11Q05519 484 aaKnown RBP6.92□□□□□ -1.3
SFPQ-209ENST00000485454 CCDC102BQ68D86 513 aa6.92□□□□□ -1.3
SFPQ-209ENST00000485454 LARGE2Q8N3Y3 721 aa6.92□□□□□ -1.3
SFPQ-209ENST00000485454 TPCN2Q8NHX9 752 aa6.92□□□□□ -1.3
SFPQ-209ENST00000485454 NIFKQ9BYG3 293 aaKnown RBP6.92□□□□□ -1.3
SFPQ-209ENST00000485454 GPAMQ9HCL2 828 aa6.92□□□□□ -1.3
SFPQ-209ENST00000485454 KIAA1024Q9UPX6 916 aa6.92□□□□□ -1.3
SFPQ-209ENST00000485454 ARHGEF15O94989 841 aa6.91□□□□□ -1.3
SFPQ-209ENST00000485454 PLA2G4AP47712 749 aa6.91□□□□□ -1.3
SFPQ-209ENST00000485454 MAP3K10Q02779 954 aa6.91□□□□□ -1.3
SFPQ-209ENST00000485454 FOXR1Q6PIV2 292 aa6.91□□□□□ -1.3
SFPQ-209ENST00000485454 NUCKS1Q9H1E3 243 aaKnown RBP6.91□□□□□ -1.3
SFPQ-209ENST00000485454 IQSEC3Q9UPP2 1182 aaPredicted RBP6.91□□□□□ -1.3
SFPQ-209ENST00000485454 MSX1P28360 303 aa6.9□□□□□ -1.3
SFPQ-209ENST00000485454 LMOD1P29536 600 aaPredicted RBP6.9□□□□□ -1.3
SFPQ-209ENST00000485454 IRS1P35568 1242 aa6.9□□□□□ -1.3
SFPQ-209ENST00000485454 GAS6Q14393 721 aa6.9□□□□□ -1.3
SFPQ-209ENST00000485454 LYPD4Q6UWN0 246 aa6.9□□□□□ -1.3
SFPQ-209ENST00000485454 SIX5Q8N196 739 aa6.9□□□□□ -1.3
SFPQ-209ENST00000485454 GTPBP3Q969Y2 492 aaKnown RBP6.9□□□□□ -1.3
SFPQ-209ENST00000485454 CABP1Q9NZU7 370 aa6.9□□□□□ -1.3
SFPQ-209ENST00000485454 RBM19Q9Y4C8 960 aaKnown RBP6.9□□□□□ -1.3
SFPQ-209ENST00000485454 USP3Q9Y6I4 520 aa6.9□□□□□ -1.3
SFPQ-209ENST00000485454 CSB-PGBD3P0DP91 1061 aa6.89□□□□□ -1.31
SFPQ-209ENST00000485454 RASA1P20936 1047 aa6.89□□□□□ -1.31
SFPQ-209ENST00000485454 EPHA4P54764 986 aa6.89□□□□□ -1.31
SFPQ-209ENST00000485454 LBRQ14739 615 aaKnown RBP6.89□□□□□ -1.31
SFPQ-209ENST00000485454 ZNF295-AS1Q8N0V1 137 aa6.89□□□□□ -1.31
SFPQ-209ENST00000485454 PGBD3Q8N328 593 aa6.89□□□□□ -1.31
SFPQ-209ENST00000485454 SCARF2Q96GP6 870 aaPredicted RBP6.89□□□□□ -1.31
SFPQ-209ENST00000485454 ZNF594Q96JF6 807 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms