RNA–Protein interactions for RNA: ENST00000485093.1

TM9SF3-205, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-205ENST00000485093 RFX1P22670 979 aa7.22□□□□□ -1.25
TM9SF3-205ENST00000485093 ATP1A2P50993 1020 aa7.22□□□□□ -1.25
TM9SF3-205ENST00000485093 FOXK2Q01167 660 aa7.22□□□□□ -1.25
TM9SF3-205ENST00000485093 FOXD4L5Q5VV16 416 aaPredicted RBP7.22□□□□□ -1.25
TM9SF3-205ENST00000485093 IQSEC3Q9UPP2 1182 aaPredicted RBP7.22□□□□□ -1.25
TM9SF3-205ENST00000485093 USP17L15C9J2P7 530 aa7.21□□□□□ -1.26
TM9SF3-205ENST00000485093 USP17L10C9JJH3 530 aa7.21□□□□□ -1.26
TM9SF3-205ENST00000485093 USP17L13C9JLJ4 530 aa7.21□□□□□ -1.26
TM9SF3-205ENST00000485093 USP17L12C9JPN9 530 aa7.21□□□□□ -1.26
TM9SF3-205ENST00000485093 USP17L11C9JVI0 530 aa7.21□□□□□ -1.26
TM9SF3-205ENST00000485093 USP17L21D6R901 530 aa7.21□□□□□ -1.26
TM9SF3-205ENST00000485093 USP17L18D6R9N7 530 aa7.21□□□□□ -1.26
TM9SF3-205ENST00000485093 USP17L22D6RA61 530 aa7.21□□□□□ -1.26
TM9SF3-205ENST00000485093 USP17L17D6RBQ6 530 aa7.21□□□□□ -1.26
TM9SF3-205ENST00000485093 USP17L19D6RCP7 530 aa7.21□□□□□ -1.26
TM9SF3-205ENST00000485093 USP17L20D6RJB6 530 aa7.21□□□□□ -1.26
TM9SF3-205ENST00000485093 BMP1P13497 986 aa7.21□□□□□ -1.26
TM9SF3-205ENST00000485093 USP17L24Q0WX57 530 aa7.21□□□□□ -1.26
TM9SF3-205ENST00000485093 CCDC102BQ68D86 513 aa7.21□□□□□ -1.26
TM9SF3-205ENST00000485093 CNKSR1Q969H4 720 aa7.21□□□□□ -1.26
TM9SF3-205ENST00000485093 KRTAP4-8Q9BYQ9 185 aa7.21□□□□□ -1.26
TM9SF3-205ENST00000485093 RASA1P20936 1047 aa7.2□□□□□ -1.26
TM9SF3-205ENST00000485093 CTSOP43234 321 aaPredicted RBP7.2□□□□□ -1.26
TM9SF3-205ENST00000485093 GDF10P55107 478 aa7.2□□□□□ -1.26
TM9SF3-205ENST00000485093 CENPCQ03188 943 aa7.2□□□□□ -1.26
TM9SF3-205ENST00000485093 ANKMY2Q8IV38 441 aa7.2□□□□□ -1.26
TM9SF3-205ENST00000485093 TRIM47Q96LD4 638 aa7.2□□□□□ -1.26
TM9SF3-205ENST00000485093 ZNF395Q9H8N7 513 aaPredicted RBP7.2□□□□□ -1.26
TM9SF3-205ENST00000485093 ZNF358Q9NW07 568 aa7.2□□□□□ -1.26
TM9SF3-205ENST00000485093 MYO15BQ96JP2 1530 aa7.2□□□□□ -1.26
TM9SF3-205ENST00000485093 TMEM88BA6NKF7 163 aa7.19□□□□□ -1.26
TM9SF3-205ENST00000485093 SPATA31C2B4DYI2 1134 aa7.19□□□□□ -1.26
TM9SF3-205ENST00000485093 SNRPBP14678 240 aaKnown RBP7.19□□□□□ -1.26
TM9SF3-205ENST00000485093 RELBQ01201 579 aa7.19□□□□□ -1.26
TM9SF3-205ENST00000485093 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.19□□□□□ -1.26
TM9SF3-205ENST00000485093 RNF217Q8TC41 542 aa7.19□□□□□ -1.26
TM9SF3-205ENST00000485093 PURBQ96QR8 312 aaKnown RBP7.19□□□□□ -1.26
TM9SF3-205ENST00000485093 INSM2Q96T92 566 aaPredicted RBP7.19□□□□□ -1.26
TM9SF3-205ENST00000485093 ARHGEF10LQ9HCE6 1279 aa7.19□□□□□ -1.26
TM9SF3-205ENST00000485093 SLAIN2Q9P270 581 aa7.19□□□□□ -1.26
TM9SF3-205ENST00000485093 SCRIBQ14160 1630 aa7.19□□□□□ -1.26
TM9SF3-205ENST00000485093 NACADO15069 1562 aa7.18□□□□□ -1.26
TM9SF3-205ENST00000485093 CDK2AP1O14519 115 aa7.18□□□□□ -1.26
TM9SF3-205ENST00000485093 SMTNP53814 917 aa7.18□□□□□ -1.26
TM9SF3-205ENST00000485093 DPYDQ12882 1025 aa7.18□□□□□ -1.26
TM9SF3-205ENST00000485093 CDCA8Q53HL2 280 aa7.18□□□□□ -1.26
TM9SF3-205ENST00000485093 ESCO1Q5FWF5 840 aa7.18□□□□□ -1.26
TM9SF3-205ENST00000485093 WDR44Q5JSH3 913 aa7.18□□□□□ -1.26
TM9SF3-205ENST00000485093 PPARGC1BQ86YN6 1023 aaKnown RBP7.18□□□□□ -1.26
TM9SF3-205ENST00000485093 SEC13P55735 322 aa7.17□□□□□ -1.26
TM9SF3-205ENST00000485093 LARP1Q6PKG0 1096 aaKnown RBP7.17□□□□□ -1.26
TM9SF3-205ENST00000485093 C7orf43Q8WVR3 580 aa7.17□□□□□ -1.26
TM9SF3-205ENST00000485093 SCHIP1Q9P0W5 487 aaPredicted RBP7.17□□□□□ -1.26
TM9SF3-205ENST00000485093 A6NJY4 79 aa7.16□□□□□ -1.26
TM9SF3-205ENST00000485093 SFI1A8K8P3 1242 aa7.16□□□□□ -1.26
TM9SF3-205ENST00000485093 C21orf2O43822 256 aa7.16□□□□□ -1.26
TM9SF3-205ENST00000485093 GMPRP36959 345 aa7.16□□□□□ -1.26
TM9SF3-205ENST00000485093 SCARF1Q14162 830 aa7.16□□□□□ -1.26
TM9SF3-205ENST00000485093 TPCN2Q8NHX9 752 aa7.16□□□□□ -1.26
TM9SF3-205ENST00000485093 SENP2Q9HC62 589 aa7.16□□□□□ -1.26
TM9SF3-205ENST00000485093 RAB6BQ9NRW1 208 aa7.16□□□□□ -1.26
TM9SF3-205ENST00000485093 DNMT3LQ9UJW3 386 aa7.16□□□□□ -1.26
TM9SF3-205ENST00000485093 NOVA2Q9UNW9 492 aaKnown RBP7.16□□□□□ -1.26
TM9SF3-205ENST00000485093 ACIN1Q9UKV3 1341 aaKnown RBP7.16□□□□□ -1.26
TM9SF3-205ENST00000485093 TTLL8A6PVC2 850 aa7.15□□□□□ -1.26
TM9SF3-205ENST00000485093 BACH1O14867 736 aa7.15□□□□□ -1.26
TM9SF3-205ENST00000485093 BMP2P12643 396 aa7.15□□□□□ -1.26
TM9SF3-205ENST00000485093 WEE1P30291 646 aa7.15□□□□□ -1.26
TM9SF3-205ENST00000485093 GSK3AP49840 483 aa7.15□□□□□ -1.26
TM9SF3-205ENST00000485093 TMEM164Q5U3C3 297 aa7.15□□□□□ -1.26
TM9SF3-205ENST00000485093 KCTD17Q8N5Z5 321 aa7.15□□□□□ -1.26
TM9SF3-205ENST00000485093 STK32AQ8WU08 396 aa7.15□□□□□ -1.26
TM9SF3-205ENST00000485093 KIFC2Q96AC6 838 aa7.15□□□□□ -1.26
TM9SF3-205ENST00000485093 ZNF594Q96JF6 807 aaPredicted RBP7.15□□□□□ -1.26
TM9SF3-205ENST00000485093 USP3Q9Y6I4 520 aa7.15□□□□□ -1.26
TM9SF3-205ENST00000485093 SENP3-EIF4A1A0A087X0R7 540 aa7.14□□□□□ -1.27
TM9SF3-205ENST00000485093 UPP2O95045 317 aa7.14□□□□□ -1.27
TM9SF3-205ENST00000485093 OCLNQ16625 522 aa7.14□□□□□ -1.27
TM9SF3-205ENST00000485093 SWI5Q1ZZU3 235 aa7.14□□□□□ -1.27
TM9SF3-205ENST00000485093 C6orf118Q5T5N4 469 aa7.14□□□□□ -1.27
TM9SF3-205ENST00000485093 XP32Q5T750 250 aa7.14□□□□□ -1.27
TM9SF3-205ENST00000485093 STAG2Q8N3U4 1231 aa7.14□□□□□ -1.27
TM9SF3-205ENST00000485093 FAM200AQ8TCP9 573 aa7.14□□□□□ -1.27
TM9SF3-205ENST00000485093 ESF1Q9H501 851 aaKnown RBP7.14□□□□□ -1.27
TM9SF3-205ENST00000485093 TNS4Q8IZW8 715 aa7.13□□□□□ -1.27
TM9SF3-205ENST00000485093 TSEN2Q8NCE0 465 aaKnown RBP7.13□□□□□ -1.27
TM9SF3-205ENST00000485093 CLP1Q92989 425 aaKnown RBP7.13□□□□□ -1.27
TM9SF3-205ENST00000485093 ARID3AQ99856 593 aa7.13□□□□□ -1.27
TM9SF3-205ENST00000485093 HIRAP54198 1017 aaPredicted RBP7.12□□□□□ -1.27
TM9SF3-205ENST00000485093 KCNMA1Q12791 1236 aa7.12□□□□□ -1.27
TM9SF3-205ENST00000485093 TEAD4Q15561 434 aa7.12□□□□□ -1.27
TM9SF3-205ENST00000485093 PHLDB3Q6NSJ2 640 aa7.12□□□□□ -1.27
TM9SF3-205ENST00000485093 GAS2L2Q8NHY3 880 aa7.12□□□□□ -1.27
TM9SF3-205ENST00000485093 SLC35F4A4IF30 521 aa7.11□□□□□ -1.27
TM9SF3-205ENST00000485093 MEN1O00255 615 aa7.11□□□□□ -1.27
TM9SF3-205ENST00000485093 SLC16A10Q8TF71 515 aa7.11□□□□□ -1.27
TM9SF3-205ENST00000485093 ZDHHC1Q8WTX9 485 aa7.11□□□□□ -1.27
TM9SF3-205ENST00000485093 NLRP3Q96P20 1036 aa7.11□□□□□ -1.27
TM9SF3-205ENST00000485093 SERTAD1Q9UHV2 236 aa7.11□□□□□ -1.27
TM9SF3-205ENST00000485093 RB1CC1Q8TDY2 1594 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms