RNA–Protein interactions for RNA: ENST00000484873.6

CAPN8-210, Transcript of calpain 8, humanhuman

TSL 3

Gene CAPN8, Length 364 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-210ENST00000484873 CACNB1Q02641 598 aaPredicted RBP5.66□□□□□ -1.5
CAPN8-210ENST00000484873 RASSF7Q02833 373 aa5.66□□□□□ -1.5
CAPN8-210ENST00000484873 GRM1Q13255 1194 aa5.66□□□□□ -1.5
CAPN8-210ENST00000484873 NUDT16Q96DE0 195 aaKnown RBP5.66□□□□□ -1.5
CAPN8-210ENST00000484873 C14orf93Q9H972 538 aaKnown RBP5.66□□□□□ -1.5
CAPN8-210ENST00000484873 KIF13BQ9NQT8 1826 aa5.66□□□□□ -1.5
CAPN8-210ENST00000484873 NSD2O96028 1365 aa5.66□□□□□ -1.5
CAPN8-210ENST00000484873 LTBP1Q14766 1721 aa5.65□□□□□ -1.5
CAPN8-210ENST00000484873 N4BP2Q86UW6 1770 aaPredicted RBP5.65□□□□□ -1.5
CAPN8-210ENST00000484873 ARFGEF1Q9Y6D6 1849 aa5.65□□□□□ -1.5
CAPN8-210ENST00000484873 MEGF6O75095 1541 aa5.65□□□□□ -1.5
CAPN8-210ENST00000484873 BRPF1P55201 1214 aaPredicted RBP5.65□□□□□ -1.5
CAPN8-210ENST00000484873 NLRP6P59044 892 aa5.65□□□□□ -1.5
CAPN8-210ENST00000484873 FAM50AQ14320 339 aaKnown RBP5.65□□□□□ -1.5
CAPN8-210ENST00000484873 NLGN1Q8N2Q7 840 aa5.65□□□□□ -1.5
CAPN8-210ENST00000484873 DDX54Q8TDD1 881 aaKnown RBP5.65□□□□□ -1.5
CAPN8-210ENST00000484873 SLIT3O75094 1523 aa5.64□□□□□ -1.51
CAPN8-210ENST00000484873 C5P01031 1676 aa5.64□□□□□ -1.51
CAPN8-210ENST00000484873 PRKCSHP14314 528 aaPredicted RBP5.64□□□□□ -1.51
CAPN8-210ENST00000484873 CYP4F22Q6NT55 531 aa5.64□□□□□ -1.51
CAPN8-210ENST00000484873 ARHGEF25Q86VW2 580 aa5.64□□□□□ -1.51
CAPN8-210ENST00000484873 AMIGO3Q86WK7 504 aa5.64□□□□□ -1.51
CAPN8-210ENST00000484873 KCNH5Q8NCM2 988 aa5.64□□□□□ -1.51
CAPN8-210ENST00000484873 NLRP2Q9NX02 1062 aa5.64□□□□□ -1.51
CAPN8-210ENST00000484873 PARP3Q9Y6F1 533 aa5.64□□□□□ -1.51
CAPN8-210ENST00000484873 CCDC61Q9Y6R9 512 aa5.64□□□□□ -1.51
CAPN8-210ENST00000484873 CUL9Q8IWT3 2517 aa5.64□□□□□ -1.51
CAPN8-210ENST00000484873 PLEKHG3A1L390 1219 aa5.63□□□□□ -1.51
CAPN8-210ENST00000484873 TMF1P82094 1093 aa5.63□□□□□ -1.51
CAPN8-210ENST00000484873 COLQQ9Y215 455 aaPredicted RBP5.63□□□□□ -1.51
CAPN8-210ENST00000484873 BRCA1P38398 1863 aaKnown RBP5.62□□□□□ -1.51
CAPN8-210ENST00000484873 RGL3Q3MIN7 710 aa5.62□□□□□ -1.51
CAPN8-210ENST00000484873 ERFEQ4G0M1 354 aa5.62□□□□□ -1.51
CAPN8-210ENST00000484873 EAPPQ56P03 285 aaPredicted RBP5.62□□□□□ -1.51
CAPN8-210ENST00000484873 CNTROBQ8N137 903 aa5.62□□□□□ -1.51
CAPN8-210ENST00000484873 COL25A1Q9BXS0 654 aaPredicted RBP5.62□□□□□ -1.51
CAPN8-210ENST00000484873 TAF1DQ9H5J8 278 aaPredicted RBP5.62□□□□□ -1.51
CAPN8-210ENST00000484873 PRDM6Q9NQX0 595 aa5.62□□□□□ -1.51
CAPN8-210ENST00000484873 HPS5Q9UPZ3 1129 aa5.62□□□□□ -1.51
CAPN8-210ENST00000484873 CLEC11AQ9Y240 323 aa5.62□□□□□ -1.51
CAPN8-210ENST00000484873 PALLDQ8WX93 1383 aa5.62□□□□□ -1.51
CAPN8-210ENST00000484873 C4BP0C0L5 1744 aa5.62□□□□□ -1.51
CAPN8-210ENST00000484873 SBF1O95248 1867 aa5.62□□□□□ -1.51
CAPN8-210ENST00000484873 AOC2O75106 756 aa5.61□□□□□ -1.51
CAPN8-210ENST00000484873 DDNO94850 711 aaPredicted RBP5.61□□□□□ -1.51
CAPN8-210ENST00000484873 PKN2Q16513 984 aaKnown RBP5.61□□□□□ -1.51
CAPN8-210ENST00000484873 CFAP70Q5T0N1 1121 aa5.61□□□□□ -1.51
CAPN8-210ENST00000484873 CTU1Q7Z7A3 348 aaKnown RBP5.61□□□□□ -1.51
CAPN8-210ENST00000484873 PNMA8AQ86V59 439 aaPredicted RBP5.61□□□□□ -1.51
CAPN8-210ENST00000484873 TIAM2Q8IVF5 1701 aa5.61□□□□□ -1.51
CAPN8-210ENST00000484873 DDX21Q9NR30 783 aaKnown RBP eCLIP5.61□□□□□ -1.51
CAPN8-210ENST00000484873 TRAK1Q9UPV9 953 aa5.61□□□□□ -1.51
CAPN8-210ENST00000484873 GNPATO15228 680 aa5.6□□□□□ -1.51
CAPN8-210ENST00000484873 NBPF1Q3BBV0 1214 aa5.6□□□□□ -1.51
CAPN8-210ENST00000484873 MAP1SQ66K74 1059 aaPredicted RBP5.6□□□□□ -1.51
CAPN8-210ENST00000484873 SMARCC1Q92922 1105 aaPredicted RBP5.6□□□□□ -1.51
CAPN8-210ENST00000484873 L3MBTL3Q96JM7 780 aaPredicted RBP5.6□□□□□ -1.51
CAPN8-210ENST00000484873 SAGE1Q9NXZ1 904 aa5.6□□□□□ -1.51
CAPN8-210ENST00000484873 TLL2Q9Y6L7 1015 aa5.6□□□□□ -1.51
CAPN8-210ENST00000484873 CASP8AP2Q9UKL3 1982 aa5.6□□□□□ -1.51
CAPN8-210ENST00000484873 TOGARAM1Q9Y4F4 1720 aa5.6□□□□□ -1.51
CAPN8-210ENST00000484873 KAT6BQ8WYB5 2073 aa5.59□□□□□ -1.51
CAPN8-210ENST00000484873 COL9A1P20849 921 aa5.59□□□□□ -1.51
CAPN8-210ENST00000484873 CHRNA5P30532 468 aa5.59□□□□□ -1.51
CAPN8-210ENST00000484873 PLA2G5P39877 138 aa5.59□□□□□ -1.51
CAPN8-210ENST00000484873 AKAP4Q5JQC9 854 aa5.59□□□□□ -1.51
CAPN8-210ENST00000484873 CIAPIN1Q6FI81 312 aa5.59□□□□□ -1.51
CAPN8-210ENST00000484873 HHIPL1Q96JK4 782 aa5.59□□□□□ -1.51
CAPN8-210ENST00000484873 CDK19Q9BWU1 502 aa5.59□□□□□ -1.51
CAPN8-210ENST00000484873 C4AP0C0L4 1744 aa5.59□□□□□ -1.51
CAPN8-210ENST00000484873 DOT1LQ8TEK3 1739 aa5.59□□□□□ -1.51
CAPN8-210ENST00000484873 NFKBIEO00221 500 aa5.58□□□□□ -1.52
CAPN8-210ENST00000484873 SOX12O15370 315 aa5.58□□□□□ -1.52
CAPN8-210ENST00000484873 APLP2Q06481 763 aa5.58□□□□□ -1.52
CAPN8-210ENST00000484873 TRAPPC3LQ5T215 181 aa5.58□□□□□ -1.52
CAPN8-210ENST00000484873 FAM122AQ96E09 287 aa5.58□□□□□ -1.52
CAPN8-210ENST00000484873 CABP2Q9NPB3 220 aa5.58□□□□□ -1.52
CAPN8-210ENST00000484873 HACL1Q9UJ83 578 aa5.58□□□□□ -1.52
CAPN8-210ENST00000484873 TAOK2Q9UL54 1235 aa5.58□□□□□ -1.52
CAPN8-210ENST00000484873 UBR3Q6ZT12 1888 aa5.58□□□□□ -1.52
CAPN8-210ENST00000484873 A0A0C4DFX4 3053 aa5.57□□□□□ -1.52
CAPN8-210ENST00000484873 EPHX2P34913 555 aa5.57□□□□□ -1.52
CAPN8-210ENST00000484873 NOGQ13253 232 aa5.57□□□□□ -1.52
CAPN8-210ENST00000484873 TTLL6Q8N841 843 aa5.57□□□□□ -1.52
CAPN8-210ENST00000484873 SNX27Q96L92 541 aa5.57□□□□□ -1.52
CAPN8-210ENST00000484873 TAF1LQ8IZX4 1826 aa5.56□□□□□ -1.52
CAPN8-210ENST00000484873 GYS1P13807 737 aa5.56□□□□□ -1.52
CAPN8-210ENST00000484873 SAPCD2Q86UD0 394 aa5.56□□□□□ -1.52
CAPN8-210ENST00000484873 LINC00116Q8NCU8 138 aa5.56□□□□□ -1.52
CAPN8-210ENST00000484873 ZCRB1Q8TBF4 217 aaKnown RBP5.56□□□□□ -1.52
CAPN8-210ENST00000484873 ANKRD24Q8TF21 1146 aa5.56□□□□□ -1.52
CAPN8-210ENST00000484873 RTCBQ9Y3I0 505 aaKnown RBP5.56□□□□□ -1.52
CAPN8-210ENST00000484873 RFC4P35249 363 aa5.55□□□□□ -1.52
CAPN8-210ENST00000484873 CST9Q5W186 159 aa5.55□□□□□ -1.52
CAPN8-210ENST00000484873 MPRIPQ6WCQ1 1025 aa5.55□□□□□ -1.52
CAPN8-210ENST00000484873 ANKRD13DQ6ZTN6 518 aa5.55□□□□□ -1.52
CAPN8-210ENST00000484873 OTUD5Q96G74 571 aa5.55□□□□□ -1.52
CAPN8-210ENST00000484873 SCN4AP35499 1836 aa5.55□□□□□ -1.52
CAPN8-210ENST00000484873 ADAMTSL1Q8N6G6 1762 aa5.55□□□□□ -1.52
CAPN8-210ENST00000484873 RGPD5Q99666 1765 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms