RNA–Protein interactions for RNA: ENST00000484806.1

SFI1-223, Transcript of SFI1 centrin binding protein, human

TSL 4

Gene SFI1, Length 567 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-223	ENST00000484806	GLI3	P10071	1580 aa		10.39	□□□□□ -0.75
SFI1-223	ENST00000484806	KDM3B	Q7LBC6	1761 aa		10.39	□□□□□ -0.75
SFI1-223	ENST00000484806	NEFL	P07196	543 aa		10.39	□□□□□ -0.75
SFI1-223	ENST00000484806	TSR2	Q969E8	191 aa	Known RBP	10.39	□□□□□ -0.75
SFI1-223	ENST00000484806	QTRT2	Q9H974	415 aa	Known RBP	10.39	□□□□□ -0.75
SFI1-223	ENST00000484806	SLC52A2	Q9HAB3	445 aa		10.39	□□□□□ -0.75
SFI1-223	ENST00000484806	SPINK5	Q9NQ38	1064 aa	Predicted RBP	10.39	□□□□□ -0.75
SFI1-223	ENST00000484806	MBIP	Q9NS73	344 aa		10.39	□□□□□ -0.75
SFI1-223	ENST00000484806	RCAN3	Q9UKA8	241 aa		10.39	□□□□□ -0.75
SFI1-223	ENST00000484806	BTBD11	A6QL63	1104 aa		10.38	□□□□□ -0.75
SFI1-223	ENST00000484806	CABP4	P57796	275 aa		10.38	□□□□□ -0.75
SFI1-223	ENST00000484806	EXOSC9	Q06265	439 aa	Known RBP	10.37	□□□□□ -0.75
SFI1-223	ENST00000484806	TTC5	Q8N0Z6	440 aa		10.37	□□□□□ -0.75
SFI1-223	ENST00000484806	LGR6	Q9HBX8	967 aa		10.37	□□□□□ -0.75
SFI1-223	ENST00000484806	CACNA1F	O60840	1977 aa		10.37	□□□□□ -0.75
SFI1-223	ENST00000484806	DOT1L	Q8TEK3	1739 aa		10.36	□□□□□ -0.75
SFI1-223	ENST00000484806	TOGARAM1	Q9Y4F4	1720 aa		10.36	□□□□□ -0.75
SFI1-223	ENST00000484806	ITGB4	P16144	1822 aa		10.36	□□□□□ -0.75
SFI1-223	ENST00000484806	HOXB7	P09629	217 aa		10.36	□□□□□ -0.75
SFI1-223	ENST00000484806	RBM6	P78332	1123 aa	Known RBP	10.36	□□□□□ -0.75
SFI1-223	ENST00000484806	TMOD3	Q9NYL9	352 aa		10.36	□□□□□ -0.75
SFI1-223	ENST00000484806	TWISTNB	Q3B726	338 aa	Predicted RBP	10.35	□□□□□ -0.75
SFI1-223	ENST00000484806	ALDH1L2	Q3SY69	923 aa		10.35	□□□□□ -0.75
SFI1-223	ENST00000484806	PAPPA	Q13219	1627 aa		10.35	□□□□□ -0.75
SFI1-223	ENST00000484806	KIF16B	Q96L93	1317 aa		10.34	□□□□□ -0.75
SFI1-223	ENST00000484806	ONECUT3	O60422	494 aa	Predicted RBP	10.34	□□□□□ -0.75
SFI1-223	ENST00000484806	CANX	P27824	592 aa	Known RBP	10.34	□□□□□ -0.75
SFI1-223	ENST00000484806	NFATC2IP	Q8NCF5	419 aa		10.34	□□□□□ -0.75
SFI1-223	ENST00000484806	BCL9	O00512	1426 aa		10.33	□□□□□ -0.76
SFI1-223	ENST00000484806	MS4A1	P11836	297 aa		10.33	□□□□□ -0.76
SFI1-223	ENST00000484806	RARS	P54136	660 aa	Known RBP	10.33	□□□□□ -0.76
SFI1-223	ENST00000484806	RRP1	P56182	461 aa	Known RBP	10.33	□□□□□ -0.76
SFI1-223	ENST00000484806	ZNF790	Q6PG37	636 aa		10.33	□□□□□ -0.76
SFI1-223	ENST00000484806	SEPT12	Q8IYM1	358 aa		10.33	□□□□□ -0.76
SFI1-223	ENST00000484806	FMNL2	Q96PY5	1086 aa		10.33	□□□□□ -0.76
SFI1-223	ENST00000484806	SMC4	Q9NTJ3	1288 aa		10.33	□□□□□ -0.76
SFI1-223	ENST00000484806	MIS18A	Q9NYP9	233 aa		10.33	□□□□□ -0.76
SFI1-223	ENST00000484806	SUPT16H	Q9Y5B9	1047 aa	Known RBP	10.33	□□□□□ -0.76
SFI1-223	ENST00000484806	UBR2	Q8IWV8	1755 aa		10.33	□□□□□ -0.76
SFI1-223	ENST00000484806	LAMB4	A4D0S4	1761 aa		10.32	□□□□□ -0.76
SFI1-223	ENST00000484806	RXRB	P28702	533 aa		10.32	□□□□□ -0.76
SFI1-223	ENST00000484806	EIF4A1	P60842	406 aa	Known RBP	10.32	□□□□□ -0.76
SFI1-223	ENST00000484806	CCDC30	Q5VVM6	783 aa		10.32	□□□□□ -0.76
SFI1-223	ENST00000484806	POTED	Q86YR6	584 aa		10.32	□□□□□ -0.76
SFI1-223	ENST00000484806	MARCH10	Q8NA82	808 aa	Predicted RBP	10.32	□□□□□ -0.76
SFI1-223	ENST00000484806	SYTL4	Q96C24	671 aa	Predicted RBP	10.32	□□□□□ -0.76
SFI1-223	ENST00000484806	STK31	Q9BXU1	1019 aa		10.32	□□□□□ -0.76
SFI1-223	ENST00000484806	NHS	Q6T4R5	1651 aa		10.31	□□□□□ -0.76
SFI1-223	ENST00000484806	IPO8	O15397	1037 aa	Known RBP	10.31	□□□□□ -0.76
SFI1-223	ENST00000484806	VAMP4	O75379	141 aa		10.31	□□□□□ -0.76
SFI1-223	ENST00000484806	C8orf58	Q8NAV2	365 aa		10.31	□□□□□ -0.76
SFI1-223	ENST00000484806	RNF123	Q5XPI4	1314 aa		10.31	□□□□□ -0.76
SFI1-223	ENST00000484806	SNRPA1	P09661	255 aa	Known RBP	10.3	□□□□□ -0.76
SFI1-223	ENST00000484806	BRPF1	P55201	1214 aa	Predicted RBP	10.3	□□□□□ -0.76
SFI1-223	ENST00000484806	HDGFL1	Q5TGJ6	251 aa		10.3	□□□□□ -0.76
SFI1-223	ENST00000484806	KRT27	Q7Z3Y8	459 aa		10.3	□□□□□ -0.76
SFI1-223	ENST00000484806	SMARCC1	Q92922	1105 aa	Predicted RBP	10.3	□□□□□ -0.76
SFI1-223	ENST00000484806	BRWD3	Q6RI45	1802 aa		10.3	□□□□□ -0.76
SFI1-223	ENST00000484806	HEG1	Q9ULI3	1381 aa		10.29	□□□□□ -0.76
SFI1-223	ENST00000484806	SBF2	Q86WG5	1849 aa		10.29	□□□□□ -0.76
SFI1-223	ENST00000484806	ELL2	O00472	640 aa	Predicted RBP	10.29	□□□□□ -0.76
SFI1-223	ENST00000484806	PRIM1	P49642	420 aa	Known RBP	10.29	□□□□□ -0.76
SFI1-223	ENST00000484806	SLC39A6	Q13433	755 aa		10.29	□□□□□ -0.76
SFI1-223	ENST00000484806	VSIG10	Q8N0Z9	540 aa		10.29	□□□□□ -0.76
SFI1-223	ENST00000484806	TSPYL6	Q8N831	410 aa		10.29	□□□□□ -0.76
SFI1-223	ENST00000484806	SSH1	Q8WYL5	1049 aa		10.29	□□□□□ -0.76
SFI1-223	ENST00000484806	PIGB	Q92521	554 aa		10.29	□□□□□ -0.76
SFI1-223	ENST00000484806	TEX13A	Q9BXU3	409 aa	Predicted RBP	10.29	□□□□□ -0.76
SFI1-223	ENST00000484806	KCP	Q6ZWJ8	1503 aa		10.28	□□□□□ -0.76
SFI1-223	ENST00000484806	GIGYF1	O75420	1035 aa	Predicted RBP	10.28	□□□□□ -0.76
SFI1-223	ENST00000484806	HMGB2	P26583	209 aa	Known RBP	10.28	□□□□□ -0.76
SFI1-223	ENST00000484806	ERICH6B	Q5W0A0	696 aa		10.28	□□□□□ -0.76
SFI1-223	ENST00000484806	ZKSCAN2	Q63HK3	967 aa		10.28	□□□□□ -0.76
SFI1-223	ENST00000484806	FAM196A	Q6ZSG2	479 aa		10.28	□□□□□ -0.76
SFI1-223	ENST00000484806	FTSJ3	Q8IY81	847 aa	Known RBP	10.28	□□□□□ -0.76
SFI1-223	ENST00000484806	ACSBG1	Q96GR2	724 aa		10.28	□□□□□ -0.76
SFI1-223	ENST00000484806	PTPRC	P08575	1304 aa		10.28	□□□□□ -0.76
SFI1-223	ENST00000484806	ERBB4	Q15303	1308 aa		10.28	□□□□□ -0.76
SFI1-223	ENST00000484806	C5	P01031	1676 aa		10.28	□□□□□ -0.76
SFI1-223	ENST00000484806	KCNQ3	O43525	872 aa		10.27	□□□□□ -0.77
SFI1-223	ENST00000484806	BCAR3	O75815	825 aa		10.27	□□□□□ -0.77
SFI1-223	ENST00000484806	KRT24	Q2M2I5	525 aa		10.27	□□□□□ -0.77
SFI1-223	ENST00000484806	MRPL50	Q8N5N7	158 aa	Known RBP	10.27	□□□□□ -0.77
SFI1-223	ENST00000484806	FRAT1	Q92837	279 aa	Predicted RBP	10.27	□□□□□ -0.77
SFI1-223	ENST00000484806	ZNF496	Q96IT1	587 aa	Predicted RBP	10.27	□□□□□ -0.77
SFI1-223	ENST00000484806	BCL2L13	Q9BXK5	485 aa		10.27	□□□□□ -0.77
SFI1-223	ENST00000484806	API5	Q9BZZ5	524 aa	Known RBP	10.27	□□□□□ -0.77
SFI1-223	ENST00000484806	BTAF1	O14981	1849 aa		10.27	□□□□□ -0.77
SFI1-223	ENST00000484806	RGS12	O14924	1447 aa		10.26	□□□□□ -0.77
SFI1-223	ENST00000484806	ZNF831	Q5JPB2	1677 aa		10.26	□□□□□ -0.77
SFI1-223	ENST00000484806	EP400	Q96L91	3159 aa		10.26	□□□□□ -0.77
SFI1-223	ENST00000484806	EIF2S2	P20042	333 aa	Known RBP	10.26	□□□□□ -0.77
SFI1-223	ENST00000484806	PDE3A	Q14432	1141 aa		10.26	□□□□□ -0.77
SFI1-223	ENST00000484806	ARHGAP45	Q92619	1136 aa		10.26	□□□□□ -0.77
SFI1-223	ENST00000484806	ATG3	Q9NT62	314 aa		10.26	□□□□□ -0.77
SFI1-223	ENST00000484806	DBF4	Q9UBU7	674 aa	Predicted RBP	10.26	□□□□□ -0.77
SFI1-223	ENST00000484806	PALLD	Q8WX93	1383 aa		10.26	□□□□□ -0.77
SFI1-223	ENST00000484806	CIC	Q96RK0	1608 aa	Predicted RBP	10.25	□□□□□ -0.77
SFI1-223	ENST00000484806	PTCD1	O75127	700 aa	Known RBP	10.25	□□□□□ -0.77
SFI1-223	ENST00000484806	STARD3NL	O95772	234 aa		10.25	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms