RNA–Protein interactions for RNA: ENST00000484751.1

TMEM248-206, Transcript of transmembrane protein 248, humanhuman

TSL 2

Gene TMEM248, Length 739 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-206ENST00000484751 ABTB2Q8N961 1025 aa10.59□□□□□ -0.71
TMEM248-206ENST00000484751 TNPO1Q92973 898 aaKnown RBP10.59□□□□□ -0.71
TMEM248-206ENST00000484751 KIF2CQ99661 725 aa10.59□□□□□ -0.71
TMEM248-206ENST00000484751 USP26Q9BXU7 913 aa10.59□□□□□ -0.71
TMEM248-206ENST00000484751 LRRCC1Q9C099 1032 aa10.59□□□□□ -0.71
TMEM248-206ENST00000484751 FER1L4A9Z1Z3 1794 aa10.59□□□□□ -0.71
TMEM248-206ENST00000484751 PIK3C2AO00443 1686 aa10.58□□□□□ -0.72
TMEM248-206ENST00000484751 RAB11FIP3O75154 756 aa10.58□□□□□ -0.72
TMEM248-206ENST00000484751 CEBPAP49715 358 aaPredicted RBP10.58□□□□□ -0.72
TMEM248-206ENST00000484751 HSP90AB4PQ58FF6 505 aa10.58□□□□□ -0.72
TMEM248-206ENST00000484751 ANKLE2Q86XL3 938 aa10.58□□□□□ -0.72
TMEM248-206ENST00000484751 PHF8Q9UPP1 1060 aa10.58□□□□□ -0.72
TMEM248-206ENST00000484751 CEP170BQ9Y4F5 1589 aaPredicted RBP10.57□□□□□ -0.72
TMEM248-206ENST00000484751 PDE1AP54750 535 aa10.57□□□□□ -0.72
TMEM248-206ENST00000484751 ANAPC15P60006 121 aa10.57□□□□□ -0.72
TMEM248-206ENST00000484751 ATP8B2P98198 1209 aa10.57□□□□□ -0.72
TMEM248-206ENST00000484751 KRT24Q2M2I5 525 aa10.57□□□□□ -0.72
TMEM248-206ENST00000484751 IP6K1Q92551 441 aa10.57□□□□□ -0.72
TMEM248-206ENST00000484751 ANP32BQ92688 251 aaKnown RBP10.57□□□□□ -0.72
TMEM248-206ENST00000484751 NCAPD2Q15021 1401 aa10.57□□□□□ -0.72
TMEM248-206ENST00000484751 IBTKQ9P2D0 1353 aaPredicted RBP10.56□□□□□ -0.72
TMEM248-206ENST00000484751 UBTFL1P0CB47 393 aaPredicted RBP10.56□□□□□ -0.72
TMEM248-206ENST00000484751 KCNA6P17658 529 aa10.56□□□□□ -0.72
TMEM248-206ENST00000484751 AMOTQ4VCS5 1084 aa10.56□□□□□ -0.72
TMEM248-206ENST00000484751 HDGFL1Q5TGJ6 251 aa10.56□□□□□ -0.72
TMEM248-206ENST00000484751 OVOS2A0A0G2JMS6 1433 aa10.56□□□□□ -0.72
TMEM248-206ENST00000484751 FOXO3O43524 673 aa10.55□□□□□ -0.72
TMEM248-206ENST00000484751 MX1P20591 662 aa10.55□□□□□ -0.72
TMEM248-206ENST00000484751 PLEKHO1Q53GL0 409 aaPredicted RBP10.55□□□□□ -0.72
TMEM248-206ENST00000484751 C14orf37Q86TY3 774 aa10.55□□□□□ -0.72
TMEM248-206ENST00000484751 STAP2Q9UGK3 403 aa10.55□□□□□ -0.72
TMEM248-206ENST00000484751 G2E3Q7L622 706 aa10.54□□□□□ -0.72
TMEM248-206ENST00000484751 GRPEL1Q9HAV7 217 aa10.54□□□□□ -0.72
TMEM248-206ENST00000484751 MIS18AQ9NYP9 233 aa10.54□□□□□ -0.72
TMEM248-206ENST00000484751 FAM208AQ9UK61 1670 aaKnown RBP10.53□□□□□ -0.72
TMEM248-206ENST00000484751 CEMIPQ8WUJ3 1361 aa10.53□□□□□ -0.72
TMEM248-206ENST00000484751 F6X3S4 739 aa10.53□□□□□ -0.72
TMEM248-206ENST00000484751 APBB1O00213 710 aa10.53□□□□□ -0.72
TMEM248-206ENST00000484751 SMARCA5O60264 1052 aaPredicted RBP10.53□□□□□ -0.72
TMEM248-206ENST00000484751 PSME1Q06323 249 aa10.53□□□□□ -0.72
TMEM248-206ENST00000484751 TEFQ10587 303 aa10.53□□□□□ -0.72
TMEM248-206ENST00000484751 KLHL40Q2TBA0 621 aa10.53□□□□□ -0.72
TMEM248-206ENST00000484751 AKAP4Q5JQC9 854 aa10.53□□□□□ -0.72
TMEM248-206ENST00000484751 C16orf71Q8IYS4 520 aaPredicted RBP10.53□□□□□ -0.72
TMEM248-206ENST00000484751 GZF1Q9H116 711 aaPredicted RBP10.53□□□□□ -0.72
TMEM248-206ENST00000484751 NWD1Q149M9 1564 aa10.52□□□□□ -0.72
TMEM248-206ENST00000484751 BAG4O95429 457 aaKnown RBP10.52□□□□□ -0.73
TMEM248-206ENST00000484751 XRCC6P12956 609 aaKnown RBP eCLIP10.52□□□□□ -0.73
TMEM248-206ENST00000484751 C1orf141Q5JVX7 400 aa10.52□□□□□ -0.73
TMEM248-206ENST00000484751 IL17REQ8NFR9 667 aa10.52□□□□□ -0.73
TMEM248-206ENST00000484751 SSH3Q8TE77 659 aa10.52□□□□□ -0.73
TMEM248-206ENST00000484751 KIF1BPQ96EK5 621 aa10.52□□□□□ -0.73
TMEM248-206ENST00000484751 GPATCH3Q96I76 525 aa10.52□□□□□ -0.73
TMEM248-206ENST00000484751 ESYT1Q9BSJ8 1104 aa10.52□□□□□ -0.73
TMEM248-206ENST00000484751 LMTK3Q96Q04 1460 aa10.52□□□□□ -0.73
TMEM248-206ENST00000484751 N4BP2Q86UW6 1770 aaPredicted RBP10.52□□□□□ -0.73
TMEM248-206ENST00000484751 TRIM6-TRIM34B2RNG4 842 aa10.51□□□□□ -0.73
TMEM248-206ENST00000484751 ERC1Q8IUD2 1116 aa10.51□□□□□ -0.73
TMEM248-206ENST00000484751 OTUD7AQ8TE49 926 aaPredicted RBP10.51□□□□□ -0.73
TMEM248-206ENST00000484751 TRIM44Q96DX7 344 aaPredicted RBP10.51□□□□□ -0.73
TMEM248-206ENST00000484751 IL17RAQ96F46 866 aa10.51□□□□□ -0.73
TMEM248-206ENST00000484751 LTV1Q96GA3 475 aaPredicted RBP10.51□□□□□ -0.73
TMEM248-206ENST00000484751 INTS4Q96HW7 963 aaKnown RBP10.51□□□□□ -0.73
TMEM248-206ENST00000484751 RTN4Q9NQC3 1192 aaKnown RBP10.51□□□□□ -0.73
TMEM248-206ENST00000484751 EXOC6BQ9Y2D4 811 aa10.51□□□□□ -0.73
TMEM248-206ENST00000484751 LRRFIP2Q9Y608 721 aaKnown RBP10.51□□□□□ -0.73
TMEM248-206ENST00000484751 DDX49Q9Y6V7 483 aaKnown RBP10.51□□□□□ -0.73
TMEM248-206ENST00000484751 SALL3Q9BXA9 1300 aa10.51□□□□□ -0.73
TMEM248-206ENST00000484751 PLEKHG2Q9H7P9 1386 aa10.51□□□□□ -0.73
TMEM248-206ENST00000484751 PHRF1Q9P1Y6 1649 aaKnown RBP10.51□□□□□ -0.73
TMEM248-206ENST00000484751 CACNA1FO60840 1977 aa10.5□□□□□ -0.73
TMEM248-206ENST00000484751 NFAT5O94916 1531 aa10.5□□□□□ -0.73
TMEM248-206ENST00000484751 ALDH1L1O75891 902 aa10.5□□□□□ -0.73
TMEM248-206ENST00000484751 CD2BP2O95400 341 aaKnown RBP10.5□□□□□ -0.73
TMEM248-206ENST00000484751 MBD3O95983 291 aa10.5□□□□□ -0.73
TMEM248-206ENST00000484751 SSFA2P28290 1259 aa10.5□□□□□ -0.73
TMEM248-206ENST00000484751 CNTROBQ8N137 903 aa10.5□□□□□ -0.73
TMEM248-206ENST00000484751 RUFY2Q8WXA3 655 aa10.5□□□□□ -0.73
TMEM248-206ENST00000484751 DNAAF4Q8WXU2 420 aa10.5□□□□□ -0.73
TMEM248-206ENST00000484751 RBM42Q9BTD8 480 aaKnown RBP10.5□□□□□ -0.73
TMEM248-206ENST00000484751 MED1Q15648 1581 aaPredicted RBP10.5□□□□□ -0.73
TMEM248-206ENST00000484751 DDX58O95786 925 aaKnown RBP10.49□□□□□ -0.73
TMEM248-206ENST00000484751 CYP2E1P05181 493 aaPredicted RBP10.49□□□□□ -0.73
TMEM248-206ENST00000484751 CHMLP26374 656 aa10.49□□□□□ -0.73
TMEM248-206ENST00000484751 HOXD11P31277 338 aaPredicted RBP10.49□□□□□ -0.73
TMEM248-206ENST00000484751 EIF4A1P60842 406 aaKnown RBP10.49□□□□□ -0.73
TMEM248-206ENST00000484751 POLA2Q14181 598 aa10.49□□□□□ -0.73
TMEM248-206ENST00000484751 NUTM2GQ5VZR2 741 aa10.49□□□□□ -0.73
TMEM248-206ENST00000484751 ZNF530Q6P9A1 599 aaPredicted RBP10.49□□□□□ -0.73
TMEM248-206ENST00000484751 RILPL2Q969X0 211 aa10.49□□□□□ -0.73
TMEM248-206ENST00000484751 USP44Q9H0E7 712 aa10.49□□□□□ -0.73
TMEM248-206ENST00000484751 FOXD4L1Q9NU39 408 aa10.49□□□□□ -0.73
TMEM248-206ENST00000484751 DBF4Q9UBU7 674 aaPredicted RBP10.49□□□□□ -0.73
TMEM248-206ENST00000484751 ZNF142P52746 1687 aaPredicted RBP10.49□□□□□ -0.73
TMEM248-206ENST00000484751 BTBD11A6QL63 1104 aa10.48□□□□□ -0.73
TMEM248-206ENST00000484751 SURF6O75683 361 aaKnown RBP10.48□□□□□ -0.73
TMEM248-206ENST00000484751 NCLP19338 710 aaKnown RBP10.48□□□□□ -0.73
TMEM248-206ENST00000484751 NEK4P51957 841 aa10.48□□□□□ -0.73
TMEM248-206ENST00000484751 CCDC173Q0VFZ6 552 aa10.48□□□□□ -0.73
TMEM248-206ENST00000484751 ESCO1Q5FWF5 840 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms