RNA–Protein interactions for RNA: ENST00000484552.5

CAST-210, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-210ENST00000484552 NAT2P11245 290 aa9.89□□□□□ -0.83
CAST-210ENST00000484552 COL19A1Q14993 1142 aa9.89□□□□□ -0.83
CAST-210ENST00000484552 TCEAL1Q15170 157 aa9.89□□□□□ -0.83
CAST-210ENST00000484552 C16orf87Q6PH81 154 aa9.89□□□□□ -0.83
CAST-210ENST00000484552 KRT77Q7Z794 578 aa9.89□□□□□ -0.83
CAST-210ENST00000484552 UBE2Q1Q7Z7E8 422 aa9.89□□□□□ -0.83
CAST-210ENST00000484552 DDX27Q96GQ7 796 aaKnown RBP9.89□□□□□ -0.83
CAST-210ENST00000484552 CLIP1P30622 1438 aa9.88□□□□□ -0.83
CAST-210ENST00000484552 FGAP02671 866 aa9.88□□□□□ -0.83
CAST-210ENST00000484552 FAM163BP0C2L3 166 aa9.88□□□□□ -0.83
CAST-210ENST00000484552 COL6A1P12109 1028 aa9.88□□□□□ -0.83
CAST-210ENST00000484552 VAMP1P23763 118 aa9.88□□□□□ -0.83
CAST-210ENST00000484552 E2F5Q15329 346 aa9.88□□□□□ -0.83
CAST-210ENST00000484552 CCDC144BQ3MJ40 725 aa9.88□□□□□ -0.83
CAST-210ENST00000484552 MFSD4BQ5TF39 518 aa9.88□□□□□ -0.83
CAST-210ENST00000484552 TTC39BQ5VTQ0 682 aaPredicted RBP9.88□□□□□ -0.83
CAST-210ENST00000484552 ANKRD13DQ6ZTN6 518 aa9.88□□□□□ -0.83
CAST-210ENST00000484552 TTC30AQ86WT1 665 aa9.88□□□□□ -0.83
CAST-210ENST00000484552 MNS1Q8NEH6 495 aa9.88□□□□□ -0.83
CAST-210ENST00000484552 ERCC4Q92889 916 aaPredicted RBP9.88□□□□□ -0.83
CAST-210ENST00000484552 SMC4Q9NTJ3 1288 aa9.88□□□□□ -0.83
CAST-210ENST00000484552 CHCHD3Q9NX63 227 aaKnown RBP9.88□□□□□ -0.83
CAST-210ENST00000484552 UTP6Q9NYH9 597 aaKnown RBP9.88□□□□□ -0.83
CAST-210ENST00000484552 DONSONQ9NYP3 566 aa9.88□□□□□ -0.83
CAST-210ENST00000484552 MAPKBP1O60336 1514 aa9.88□□□□□ -0.83
CAST-210ENST00000484552 CARMIL1Q5VZK9 1371 aa9.88□□□□□ -0.83
CAST-210ENST00000484552 GOLGA6L6A8MZA4 724 aa9.88□□□□□ -0.83
CAST-210ENST00000484552 NPAS4Q8IUM7 802 aa9.88□□□□□ -0.83
CAST-210ENST00000484552 IQCF2Q8IXL9 164 aa9.88□□□□□ -0.83
CAST-210ENST00000484552 SAMD3Q8N6K7 520 aa9.88□□□□□ -0.83
CAST-210ENST00000484552 PBXIP1Q96AQ6 731 aa9.88□□□□□ -0.83
CAST-210ENST00000484552 CASS4Q9NQ75 786 aa9.88□□□□□ -0.83
CAST-210ENST00000484552 COL4A3BPQ9Y5P4 624 aa9.88□□□□□ -0.83
CAST-210ENST00000484552 PABPN1LA6NDY0 278 aaKnown RBP9.87□□□□□ -0.83
CAST-210ENST00000484552 FOSL1P15407 271 aa9.87□□□□□ -0.83
CAST-210ENST00000484552 CLCN1P35523 988 aa9.87□□□□□ -0.83
CAST-210ENST00000484552 CLK1P49759 484 aaKnown RBP9.87□□□□□ -0.83
CAST-210ENST00000484552 IRX5P78411 483 aaPredicted RBP9.87□□□□□ -0.83
CAST-210ENST00000484552 FILIP1Q7Z7B0 1213 aa9.87□□□□□ -0.83
CAST-210ENST00000484552 RUNDC1Q96C34 613 aa9.87□□□□□ -0.83
CAST-210ENST00000484552 AGAP3Q96P47 875 aa9.87□□□□□ -0.83
CAST-210ENST00000484552 IL16Q14005 1332 aa9.86□□□□□ -0.83
CAST-210ENST00000484552 ADCY10Q96PN6 1610 aa9.86□□□□□ -0.83
CAST-210ENST00000484552 ERICH4A6NGS2 130 aa9.86□□□□□ -0.83
CAST-210ENST00000484552 GOLGA6L22H0YM25 854 aa9.86□□□□□ -0.83
CAST-210ENST00000484552 U2AF1L5P0DN76 240 aaPredicted RBP9.86□□□□□ -0.83
CAST-210ENST00000484552 U2AF1Q01081 240 aaKnown RBP eCLIP9.86□□□□□ -0.83
CAST-210ENST00000484552 UBE4AQ14139 1066 aa9.86□□□□□ -0.83
CAST-210ENST00000484552 SAFB2Q14151 953 aaKnown RBP eCLIP9.86□□□□□ -0.83
CAST-210ENST00000484552 CADPS2Q86UW7 1296 aa9.86□□□□□ -0.83
CAST-210ENST00000484552 NGDNQ8NEJ9 315 aaKnown RBP9.86□□□□□ -0.83
CAST-210ENST00000484552 ACAD8Q9UKU7 415 aa9.86□□□□□ -0.83
CAST-210ENST00000484552 GNEQ9Y223 722 aaKnown RBP9.86□□□□□ -0.83
CAST-210ENST00000484552 PAXBP1Q9Y5B6 917 aa9.86□□□□□ -0.83
CAST-210ENST00000484552 TRIM64CA6NLI5 447 aa9.86□□□□□ -0.83
CAST-210ENST00000484552 S100BP04271 92 aaPredicted RBP9.86□□□□□ -0.83
CAST-210ENST00000484552 SKILP12757 684 aa9.86□□□□□ -0.83
CAST-210ENST00000484552 DCTN1Q14203 1278 aa9.86□□□□□ -0.83
CAST-210ENST00000484552 NOM1Q5C9Z4 860 aaKnown RBP9.86□□□□□ -0.83
CAST-210ENST00000484552 MSL1Q68DK7 614 aa9.86□□□□□ -0.83
CAST-210ENST00000484552 OTUD6AQ7L8S5 288 aa9.86□□□□□ -0.83
CAST-210ENST00000484552 RPUSD2Q8IZ73 545 aaKnown RBP9.86□□□□□ -0.83
CAST-210ENST00000484552 JMYQ8N9B5 988 aa9.86□□□□□ -0.83
CAST-210ENST00000484552 GOLGA1Q92805 767 aa9.86□□□□□ -0.83
CAST-210ENST00000484552 CCDC102AQ96A19 550 aa9.86□□□□□ -0.83
CAST-210ENST00000484552 SETSIPP0DME0 302 aa9.85□□□□□ -0.83
CAST-210ENST00000484552 ALDH1L2Q3SY69 923 aa9.85□□□□□ -0.83
CAST-210ENST00000484552 SMYD5Q6GMV2 418 aa9.85□□□□□ -0.83
CAST-210ENST00000484552 LCA5Q86VQ0 697 aa9.85□□□□□ -0.83
CAST-210ENST00000484552 TMC2Q8TDI7 906 aa9.85□□□□□ -0.83
CAST-210ENST00000484552 MKRN1Q9UHC7 482 aaKnown RBP9.85□□□□□ -0.83
CAST-210ENST00000484552 KNSTRNQ9Y448 316 aa9.85□□□□□ -0.83
CAST-210ENST00000484552 ABCC10Q5T3U5 1492 aa9.85□□□□□ -0.83
CAST-210ENST00000484552 CCDC175P0C221 793 aa9.84□□□□□ -0.83
CAST-210ENST00000484552 ZNF132P52740 706 aa9.84□□□□□ -0.83
CAST-210ENST00000484552 WASHC5Q12768 1159 aa9.84□□□□□ -0.83
CAST-210ENST00000484552 TSNAXIP1Q2TAA8 658 aa9.84□□□□□ -0.83
CAST-210ENST00000484552 SWT1Q5T5J6 900 aaKnown RBP9.84□□□□□ -0.83
CAST-210ENST00000484552 RNF25Q96BH1 459 aaPredicted RBP9.84□□□□□ -0.83
CAST-210ENST00000484552 ALDH8A1Q9H2A2 487 aaPredicted RBP9.84□□□□□ -0.83
CAST-210ENST00000484552 VRTNQ9H8Y1 702 aa9.84□□□□□ -0.83
CAST-210ENST00000484552 PCDH12Q9NPG4 1184 aa9.84□□□□□ -0.83
CAST-210ENST00000484552 TBC1D2BQ9UPU7 963 aa9.84□□□□□ -0.83
CAST-210ENST00000484552 KIF13AQ9H1H9 1805 aa9.84□□□□□ -0.83
CAST-210ENST00000484552 C11orf91Q3C1V1 193 aa9.83□□□□□ -0.84
CAST-210ENST00000484552 AMOTQ4VCS5 1084 aa9.83□□□□□ -0.84
CAST-210ENST00000484552 CHCHD4Q8N4Q1 142 aa9.83□□□□□ -0.84
CAST-210ENST00000484552 STAG1Q8WVM7 1258 aa9.83□□□□□ -0.84
CAST-210ENST00000484552 ZNF396Q96N95 335 aaPredicted RBP9.83□□□□□ -0.84
CAST-210ENST00000484552 TANGO6Q9C0B7 1094 aa9.83□□□□□ -0.84
CAST-210ENST00000484552 IQSEC3Q9UPP2 1182 aaPredicted RBP9.83□□□□□ -0.84
CAST-210ENST00000484552 IQGAP2Q13576 1575 aa9.83□□□□□ -0.84
CAST-210ENST00000484552 TPPPO94811 219 aa9.83□□□□□ -0.84
CAST-210ENST00000484552 ZSCAN20P17040 1043 aaPredicted RBP9.83□□□□□ -0.84
CAST-210ENST00000484552 LONRF1Q17RB8 773 aa9.83□□□□□ -0.84
CAST-210ENST00000484552 MAP9Q49MG5 647 aa9.83□□□□□ -0.84
CAST-210ENST00000484552 ZNF394Q53GI3 561 aa9.83□□□□□ -0.84
CAST-210ENST00000484552 SOGA3Q5TF21 947 aa9.83□□□□□ -0.84
CAST-210ENST00000484552 IQCEQ6IPM2 695 aa9.83□□□□□ -0.84
CAST-210ENST00000484552 SLF2Q8IX21 1173 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms