RNA–Protein interactions for RNA: ENST00000484419.1

PRKCZ-219, Transcript of protein kinase C zeta, human

TSL 2

Gene PRKCZ, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCZ-219	ENST00000484419	TAF7	Q15545	349 aa	Predicted RBP	32.82	■■■□□ 2.84
PRKCZ-219	ENST00000484419	CCDC27	Q2M243	656 aa		32.82	■■■□□ 2.84
PRKCZ-219	ENST00000484419	ATG3	Q9NT62	314 aa		32.82	■■■□□ 2.84
PRKCZ-219	ENST00000484419	ASAP1	Q9ULH1	1129 aa		32.81	■■■□□ 2.84
PRKCZ-219	ENST00000484419	TOGARAM1	Q9Y4F4	1720 aa		32.81	■■■□□ 2.84
PRKCZ-219	ENST00000484419	MRC1	P22897	1456 aa		32.8	■■■□□ 2.84
PRKCZ-219	ENST00000484419	SCN11A	Q9UI33	1791 aa		32.78	■■■□□ 2.84
PRKCZ-219	ENST00000484419	BTBD11	A6QL63	1104 aa		32.77	■■■□□ 2.84
PRKCZ-219	ENST00000484419	EZH2	Q15910	746 aa	Known RBP	32.77	■■■□□ 2.84
PRKCZ-219	ENST00000484419	THUMPD2	Q9BTF0	503 aa	Known RBP	32.77	■■■□□ 2.84
PRKCZ-219	ENST00000484419	TNS1	Q9HBL0	1735 aa	Known RBP	32.77	■■■□□ 2.84
PRKCZ-219	ENST00000484419	KAT6B	Q8WYB5	2073 aa		32.76	■■■□□ 2.84
PRKCZ-219	ENST00000484419	PALLD	Q8WX93	1383 aa		32.76	■■■□□ 2.83
PRKCZ-219	ENST00000484419	HMGB2	P26583	209 aa	Known RBP	32.76	■■■□□ 2.83
PRKCZ-219	ENST00000484419	CALD1	Q05682	793 aa	Known RBP	32.76	■■■□□ 2.83
PRKCZ-219	ENST00000484419	TXNRD1	Q16881	649 aa		32.76	■■■□□ 2.83
PRKCZ-219	ENST00000484419	SLC27A3	Q5K4L6	730 aa		32.76	■■■□□ 2.83
PRKCZ-219	ENST00000484419	PROM2	Q8N271	834 aa		32.76	■■■□□ 2.83
PRKCZ-219	ENST00000484419	BABAM1	Q9NWV8	329 aa		32.75	■■■□□ 2.83
PRKCZ-219	ENST00000484419	ITGB4	P16144	1822 aa		32.73	■■■□□ 2.83
PRKCZ-219	ENST00000484419	ZNF790	Q6PG37	636 aa		32.73	■■■□□ 2.83
PRKCZ-219	ENST00000484419	WWC1	Q8IX03	1113 aa		32.73	■■■□□ 2.83
PRKCZ-219	ENST00000484419	BTAF1	O14981	1849 aa		32.72	■■■□□ 2.83
PRKCZ-219	ENST00000484419	TTC5	Q8N0Z6	440 aa		32.72	■■■□□ 2.83
PRKCZ-219	ENST00000484419	SLC39A6	Q13433	755 aa		32.71	■■■□□ 2.83
PRKCZ-219	ENST00000484419	LOC102724428	A0A0B4J2F2	783 aa		32.7	■■■□□ 2.83
PRKCZ-219	ENST00000484419	SIK1	P57059	783 aa		32.7	■■■□□ 2.83
PRKCZ-219	ENST00000484419	CCNL1	Q9UK58	526 aa	Predicted RBP	32.69	■■■□□ 2.82
PRKCZ-219	ENST00000484419	RBM42	Q9BTD8	480 aa	Known RBP	32.68	■■■□□ 2.82
PRKCZ-219	ENST00000484419	DLG5	Q8TDM6	1919 aa		32.68	■■■□□ 2.82
PRKCZ-219	ENST00000484419	SENP3-EIF4A1	A0A087X0R7	540 aa		32.67	■■■□□ 2.82
PRKCZ-219	ENST00000484419	PTCD1	O75127	700 aa	Known RBP	32.67	■■■□□ 2.82
PRKCZ-219	ENST00000484419	WDR63	Q8IWG1	891 aa		32.67	■■■□□ 2.82
PRKCZ-219	ENST00000484419	MIS18A	Q9NYP9	233 aa		32.67	■■■□□ 2.82
PRKCZ-219	ENST00000484419	SALL2	Q9Y467	1007 aa	Predicted RBP	32.67	■■■□□ 2.82
PRKCZ-219	ENST00000484419	CHL1	O00533	1208 aa		32.66	■■■□□ 2.82
PRKCZ-219	ENST00000484419	CFAP44	Q96MT7	982 aa		32.66	■■■□□ 2.82
PRKCZ-219	ENST00000484419	LRRC4B	Q9NT99	713 aa		32.66	■■■□□ 2.82
PRKCZ-219	ENST00000484419	ATP6V1A	P38606	617 aa		32.65	■■■□□ 2.82
PRKCZ-219	ENST00000484419	VSIG10	Q8N0Z9	540 aa		32.65	■■■□□ 2.82
PRKCZ-219	ENST00000484419	FMNL2	Q96PY5	1086 aa		32.64	■■■□□ 2.82
PRKCZ-219	ENST00000484419	IFT57	Q9NWB7	429 aa		32.64	■■■□□ 2.82
PRKCZ-219	ENST00000484419	TSPYL4	Q9UJ04	414 aa		32.64	■■■□□ 2.82
PRKCZ-219	ENST00000484419	RGPD3	A6NKT7	1758 aa	Predicted RBP	32.63	■■■□□ 2.81
PRKCZ-219	ENST00000484419	RGPD4	Q7Z3J3	1758 aa		32.63	■■■□□ 2.81
PRKCZ-219	ENST00000484419	IL16	Q14005	1332 aa		32.63	■■■□□ 2.81
PRKCZ-219	ENST00000484419	GNAI1	P63096	354 aa		32.63	■■■□□ 2.81
PRKCZ-219	ENST00000484419	KCNQ3	O43525	872 aa		32.62	■■■□□ 2.81
PRKCZ-219	ENST00000484419	ZNF853	P0CG23	659 aa		32.62	■■■□□ 2.81
PRKCZ-219	ENST00000484419	ZNF496	Q96IT1	587 aa	Predicted RBP	32.62	■■■□□ 2.81
PRKCZ-219	ENST00000484419	SLC4A9	Q96Q91	983 aa		32.62	■■■□□ 2.81
PRKCZ-219	ENST00000484419	LAS1L	Q9Y4W2	734 aa	Known RBP	32.61	■■■□□ 2.81
PRKCZ-219	ENST00000484419	NBPF14	Q5TI25	921 aa		32.6	■■■□□ 2.81
PRKCZ-219	ENST00000484419	KCNQ4	P56696	695 aa		32.59	■■■□□ 2.81
PRKCZ-219	ENST00000484419	TEX13A	Q9BXU3	409 aa	Predicted RBP	32.59	■■■□□ 2.81
PRKCZ-219	ENST00000484419	SIPA1L3	O60292	1781 aa	Predicted RBP	32.58	■■■□□ 2.81
PRKCZ-219	ENST00000484419	VIRMA	Q69YN4	1812 aa	Known RBP	32.57	■■■□□ 2.8
PRKCZ-219	ENST00000484419	EIF4A1	P60842	406 aa	Known RBP	32.57	■■■□□ 2.8
PRKCZ-219	ENST00000484419	ITPK1	Q13572	414 aa		32.57	■■■□□ 2.8
PRKCZ-219	ENST00000484419	HEG1	Q9ULI3	1381 aa		32.57	■■■□□ 2.8
PRKCZ-219	ENST00000484419	ZNF521	Q96K83	1311 aa		32.56	■■■□□ 2.8
PRKCZ-219	ENST00000484419	LY75	O60449	1722 aa		32.56	■■■□□ 2.8
PRKCZ-219	ENST00000484419	SNRPA1	P09661	255 aa	Known RBP	32.55	■■■□□ 2.8
PRKCZ-219	ENST00000484419	KCP	Q6ZWJ8	1503 aa		32.55	■■■□□ 2.8
PRKCZ-219	ENST00000484419	PAPPA	Q13219	1627 aa		32.54	■■■□□ 2.8
PRKCZ-219	ENST00000484419	MBIP	Q9NS73	344 aa		32.53	■■■□□ 2.8
PRKCZ-219	ENST00000484419	RC3H1	Q5TC82	1133 aa	Known RBP	32.52	■■■□□ 2.8
PRKCZ-219	ENST00000484419	LINC00116	Q8NCU8	138 aa		32.52	■■■□□ 2.8
PRKCZ-219	ENST00000484419	STK32B	Q9NY57	414 aa		32.52	■■■□□ 2.8
PRKCZ-219	ENST00000484419	STARD3NL	O95772	234 aa		32.51	■■■□□ 2.79
PRKCZ-219	ENST00000484419	DNAJC10	Q8IXB1	793 aa		32.51	■■■□□ 2.79
PRKCZ-219	ENST00000484419	HNRNPU	Q00839	825 aa	Known RBP eCLIP	32.5	■■■□□ 2.79
PRKCZ-219	ENST00000484419	AKT1S1	Q96B36	256 aa		32.5	■■■□□ 2.79
PRKCZ-219	ENST00000484419	GIGYF1	O75420	1035 aa	Predicted RBP	32.49	■■■□□ 2.79
PRKCZ-219	ENST00000484419	GOLGA2	Q08379	1002 aa		32.49	■■■□□ 2.79
PRKCZ-219	ENST00000484419	SLC15A2	Q16348	729 aa		32.49	■■■□□ 2.79
PRKCZ-219	ENST00000484419	ZNF831	Q5JPB2	1677 aa		32.49	■■■□□ 2.79
PRKCZ-219	ENST00000484419	RREB1	Q92766	1687 aa		32.49	■■■□□ 2.79
PRKCZ-219	ENST00000484419	CYP19A1	P11511	503 aa	Predicted RBP	32.48	■■■□□ 2.79
PRKCZ-219	ENST00000484419	MYH16	Q9H6N6	1097 aa		32.47	■■■□□ 2.79
PRKCZ-219	ENST00000484419	CNTNAP4	Q9C0A0	1308 aa		32.47	■■■□□ 2.79
PRKCZ-219	ENST00000484419	ANO8	Q9HCE9	1232 aa	Predicted RBP	32.46	■■■□□ 2.79
PRKCZ-219	ENST00000484419	UBR2	Q8IWV8	1755 aa		32.45	■■■□□ 2.79
PRKCZ-219	ENST00000484419	AK7	Q96M32	723 aa		32.45	■■■□□ 2.79
PRKCZ-219	ENST00000484419	CRKL	P46109	303 aa	Known RBP	32.44	■■■□□ 2.78
PRKCZ-219	ENST00000484419	ZNF827	Q17R98	1081 aa		32.44	■■■□□ 2.78
PRKCZ-219	ENST00000484419	USP16	Q9Y5T5	823 aa		32.44	■■■□□ 2.78
PRKCZ-219	ENST00000484419		E9PSI1	815 aa		32.43	■■■□□ 2.78
PRKCZ-219	ENST00000484419	SPINK5	Q9NQ38	1064 aa	Predicted RBP	32.43	■■■□□ 2.78
PRKCZ-219	ENST00000484419	TFCP2L1	Q9NZI6	479 aa		32.43	■■■□□ 2.78
PRKCZ-219	ENST00000484419	KDM3B	Q7LBC6	1761 aa		32.42	■■■□□ 2.78
PRKCZ-219	ENST00000484419	HOXB7	P09629	217 aa		32.42	■■■□□ 2.78
PRKCZ-219	ENST00000484419	INTS5	Q6P9B9	1019 aa	Known RBP	32.42	■■■□□ 2.78
PRKCZ-219	ENST00000484419	TSR2	Q969E8	191 aa	Known RBP	32.42	■■■□□ 2.78
PRKCZ-219	ENST00000484419	CCDC87	Q9NVE4	849 aa		32.42	■■■□□ 2.78
PRKCZ-219	ENST00000484419	NUP188	Q5SRE5	1749 aa		32.41	■■■□□ 2.78
PRKCZ-219	ENST00000484419	PRAMEF22	A3QJZ6	481 aa		32.41	■■■□□ 2.78
PRKCZ-219	ENST00000484419	RPS6KA4	O75676	772 aa		32.4	■■■□□ 2.78
PRKCZ-219	ENST00000484419	FLAD1	Q8NFF5	587 aa		32.4	■■■□□ 2.78
PRKCZ-219	ENST00000484419	SLFN5	Q08AF3	891 aa		32.39	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms