RNA–Protein interactions for RNA: ENST00000484412.1

HDLBP-240, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-240ENST00000484412 PNISRQ8TF01 805 aaKnown RBP18.51■□□□□ 0.55
HDLBP-240ENST00000484412 MRC1P22897 1456 aa18.51■□□□□ 0.55
HDLBP-240ENST00000484412 LOC102724428A0A0B4J2F2 783 aa18.5■□□□□ 0.55
HDLBP-240ENST00000484412 SIK1P57059 783 aa18.5■□□□□ 0.55
HDLBP-240ENST00000484412 NFE2L2Q16236 605 aa18.5■□□□□ 0.55
HDLBP-240ENST00000484412 RUNDC1Q96C34 613 aa18.5■□□□□ 0.55
HDLBP-240ENST00000484412 CCNL1Q9UK58 526 aaPredicted RBP18.5■□□□□ 0.55
HDLBP-240ENST00000484412 VSIG10Q8N0Z9 540 aa18.49■□□□□ 0.55
HDLBP-240ENST00000484412 WDR43Q15061 677 aaKnown RBP eCLIP18.48■□□□□ 0.55
HDLBP-240ENST00000484412 RC3H1Q5TC82 1133 aaKnown RBP18.48■□□□□ 0.55
HDLBP-240ENST00000484412 RTF1Q92541 710 aaKnown RBP18.48■□□□□ 0.55
HDLBP-240ENST00000484412 STK32BQ9NY57 414 aa18.48■□□□□ 0.55
HDLBP-240ENST00000484412 PAPPAQ13219 1627 aa18.47■□□□□ 0.55
HDLBP-240ENST00000484412 TMPOP42166 694 aaKnown RBP18.46■□□□□ 0.55
HDLBP-240ENST00000484412 TEFQ10587 303 aa18.46■□□□□ 0.55
HDLBP-240ENST00000484412 CCDC184Q52MB2 194 aa18.46■□□□□ 0.55
HDLBP-240ENST00000484412 SLC16A10Q8TF71 515 aa18.46■□□□□ 0.55
HDLBP-240ENST00000484412 SLC4A9Q96Q91 983 aa18.46■□□□□ 0.55
HDLBP-240ENST00000484412 ANO8Q9HCE9 1232 aaPredicted RBP18.46■□□□□ 0.55
HDLBP-240ENST00000484412 BABAM1Q9NWV8 329 aa18.46■□□□□ 0.55
HDLBP-240ENST00000484412 MAPK8IP3Q9UPT6 1336 aa18.46■□□□□ 0.55
HDLBP-240ENST00000484412 ATP6V1AP38606 617 aa18.45■□□□□ 0.54
HDLBP-240ENST00000484412 R3HDM1Q15032 1099 aaKnown RBP18.45■□□□□ 0.54
HDLBP-240ENST00000484412 TAF7Q15545 349 aaPredicted RBP18.45■□□□□ 0.54
HDLBP-240ENST00000484412 FLAD1Q8NFF5 587 aa18.45■□□□□ 0.54
HDLBP-240ENST00000484412 ZNF790Q6PG37 636 aa18.44■□□□□ 0.54
HDLBP-240ENST00000484412 RIPK4P57078 832 aa18.43■□□□□ 0.54
HDLBP-240ENST00000484412 TEX13AQ9BXU3 409 aaPredicted RBP18.43■□□□□ 0.54
HDLBP-240ENST00000484412 VIRMAQ69YN4 1812 aaKnown RBP18.43■□□□□ 0.54
HDLBP-240ENST00000484412 LMOD3Q0VAK6 560 aa18.42■□□□□ 0.54
HDLBP-240ENST00000484412 ITPK1Q13572 414 aa18.42■□□□□ 0.54
HDLBP-240ENST00000484412 CICQ96RK0 1608 aaPredicted RBP18.41■□□□□ 0.54
HDLBP-240ENST00000484412 QSER1Q2KHR3 1735 aa18.41■□□□□ 0.54
HDLBP-240ENST00000484412 SIPA1L3O60292 1781 aaPredicted RBP18.41■□□□□ 0.54
HDLBP-240ENST00000484412 ZNF827Q17R98 1081 aa18.41■□□□□ 0.54
HDLBP-240ENST00000484412 TAF1LQ8IZX4 1826 aa18.41■□□□□ 0.54
HDLBP-240ENST00000484412 BTBD11A6QL63 1104 aa18.4■□□□□ 0.54
HDLBP-240ENST00000484412 KCNQ4P56696 695 aa18.4■□□□□ 0.54
HDLBP-240ENST00000484412 MCM10Q7L590 875 aa18.4■□□□□ 0.54
HDLBP-240ENST00000484412 MRS2Q9HD23 443 aa18.4■□□□□ 0.54
HDLBP-240ENST00000484412 CNTNAP4Q9C0A0 1308 aa18.4■□□□□ 0.54
HDLBP-240ENST00000484412 PSDA5PKW4 1024 aaPredicted RBP18.39■□□□□ 0.53
HDLBP-240ENST00000484412 CCER2I3L3R5 266 aa18.39■□□□□ 0.53
HDLBP-240ENST00000484412 CCDC27Q2M243 656 aa18.39■□□□□ 0.53
HDLBP-240ENST00000484412 RBM42Q9BTD8 480 aaKnown RBP18.39■□□□□ 0.53
HDLBP-240ENST00000484412 TRIM35Q9UPQ4 493 aa18.39■□□□□ 0.53
HDLBP-240ENST00000484412 DLG5Q8TDM6 1919 aa18.39■□□□□ 0.53
HDLBP-240ENST00000484412 RPS6KA4O75676 772 aa18.38■□□□□ 0.53
HDLBP-240ENST00000484412 SSFA2P28290 1259 aa18.38■□□□□ 0.53
HDLBP-240ENST00000484412 SLC39A6Q13433 755 aa18.38■□□□□ 0.53
HDLBP-240ENST00000484412 DCTN1Q14203 1278 aa18.38■□□□□ 0.53
HDLBP-240ENST00000484412 TTC5Q8N0Z6 440 aa18.38■□□□□ 0.53
HDLBP-240ENST00000484412 NGEFQ8N5V2 710 aa18.38■□□□□ 0.53
HDLBP-240ENST00000484412 LINC00116Q8NCU8 138 aa18.38■□□□□ 0.53
HDLBP-240ENST00000484412 TFCP2L1Q9NZI6 479 aa18.38■□□□□ 0.53
HDLBP-240ENST00000484412 PTCD1O75127 700 aaKnown RBP18.37■□□□□ 0.53
HDLBP-240ENST00000484412 ADRA2BP18089 450 aa18.37■□□□□ 0.53
HDLBP-240ENST00000484412 FMNL2Q96PY5 1086 aa18.37■□□□□ 0.53
HDLBP-240ENST00000484412 PNPLA7Q6ZV29 1317 aa18.37■□□□□ 0.53
HDLBP-240ENST00000484412 HEG1Q9ULI3 1381 aa18.37■□□□□ 0.53
HDLBP-240ENST00000484412 C5P01031 1676 aa18.36■□□□□ 0.53
HDLBP-240ENST00000484412 CYP19A1P11511 503 aaPredicted RBP18.36■□□□□ 0.53
HDLBP-240ENST00000484412 ZNF496Q96IT1 587 aaPredicted RBP18.36■□□□□ 0.53
HDLBP-240ENST00000484412 UBR2Q8IWV8 1755 aa18.35■□□□□ 0.53
HDLBP-240ENST00000484412 KCPQ6ZWJ8 1503 aa18.35■□□□□ 0.53
HDLBP-240ENST00000484412 APAF1O14727 1248 aa18.35■□□□□ 0.53
HDLBP-240ENST00000484412 COL23A1Q86Y22 540 aaPredicted RBP18.35■□□□□ 0.53
HDLBP-240ENST00000484412 MTFR1LQ9H019 292 aa18.35■□□□□ 0.53
HDLBP-240ENST00000484412 SPON1Q9HCB6 807 aa18.35■□□□□ 0.53
HDLBP-240ENST00000484412 CASZ1Q86V15 1759 aa18.35■□□□□ 0.53
HDLBP-240ENST00000484412 C4BP0C0L5 1744 aa18.35■□□□□ 0.53
HDLBP-240ENST00000484412 CHL1O00533 1208 aa18.34■□□□□ 0.53
HDLBP-240ENST00000484412 INTS5Q6P9B9 1019 aaKnown RBP18.34■□□□□ 0.53
HDLBP-240ENST00000484412 CCDC146Q8IYE0 955 aa18.34■□□□□ 0.53
HDLBP-240ENST00000484412 SGIP1Q9BQI5 828 aa18.34■□□□□ 0.53
HDLBP-240ENST00000484412 STARD3NLO95772 234 aa18.33■□□□□ 0.52
HDLBP-240ENST00000484412 AK7Q96M32 723 aa18.33■□□□□ 0.52
HDLBP-240ENST00000484412 PDGFDQ9GZP0 370 aaPredicted RBP18.33■□□□□ 0.52
HDLBP-240ENST00000484412 RTCBQ9Y3I0 505 aaKnown RBP18.33■□□□□ 0.52
HDLBP-240ENST00000484412 KCNQ3O43525 872 aa18.32■□□□□ 0.52
HDLBP-240ENST00000484412 SNRPA1P09661 255 aaKnown RBP18.32■□□□□ 0.52
HDLBP-240ENST00000484412 ZNF853P0CG23 659 aa18.32■□□□□ 0.52
HDLBP-240ENST00000484412 TRAPPC3LQ5T215 181 aa18.32■□□□□ 0.52
HDLBP-240ENST00000484412 DNAJC10Q8IXB1 793 aa18.32■□□□□ 0.52
HDLBP-240ENST00000484412 COL5A3P25940 1745 aaPredicted RBP18.32■□□□□ 0.52
HDLBP-240ENST00000484412 COL24A1Q17RW2 1714 aa18.32■□□□□ 0.52
HDLBP-240ENST00000484412 CRKLP46109 303 aaKnown RBP18.31■□□□□ 0.52
HDLBP-240ENST00000484412 EIF4A1P60842 406 aaKnown RBP18.31■□□□□ 0.52
HDLBP-240ENST00000484412 CALD1Q05682 793 aaKnown RBP18.31■□□□□ 0.52
HDLBP-240ENST00000484412 CFAP44Q96MT7 982 aa18.31■□□□□ 0.52
HDLBP-240ENST00000484412 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.3■□□□□ 0.52
HDLBP-240ENST00000484412 PTGER2P43116 358 aa18.3■□□□□ 0.52
HDLBP-240ENST00000484412 DIEXFQ68CQ4 756 aaKnown RBP18.3■□□□□ 0.52
HDLBP-240ENST00000484412 CCDC87Q9NVE4 849 aa18.3■□□□□ 0.52
HDLBP-240ENST00000484412 UBR3Q6ZT12 1888 aa18.3■□□□□ 0.52
HDLBP-240ENST00000484412 LRP5O75197 1615 aa18.3■□□□□ 0.52
HDLBP-240ENST00000484412 MYH14Q7Z406 1995 aaKnown RBP18.3■□□□□ 0.52
HDLBP-240ENST00000484412 GIGYF1O75420 1035 aaPredicted RBP18.29■□□□□ 0.52
HDLBP-240ENST00000484412 ARHGEF1Q92888 912 aaKnown RBP18.29■□□□□ 0.52
HDLBP-240ENST00000484412 USP16Q9Y5T5 823 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms