RNA–Protein interactions for RNA: ENST00000484358.1

RPL3-216, Transcript of ribosomal protein L3, humanhuman

TSL 2

Gene RPL3, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3-216ENST00000484358 SIPA1L3O60292 1781 aaPredicted RBP17.41■□□□□ 0.38
RPL3-216ENST00000484358 CYP27B1O15528 508 aa17.41■□□□□ 0.38
RPL3-216ENST00000484358 DDB1Q16531 1140 aa17.41■□□□□ 0.38
RPL3-216ENST00000484358 TSR2Q969E8 191 aaKnown RBP17.41■□□□□ 0.38
RPL3-216ENST00000484358 EP400Q96L91 3159 aa17.41■□□□□ 0.38
RPL3-216ENST00000484358 GLI3P10071 1580 aa17.4■□□□□ 0.38
RPL3-216ENST00000484358 MRC1P22897 1456 aa17.4■□□□□ 0.38
RPL3-216ENST00000484358 ERVV-2B6SEH9 535 aa17.4■□□□□ 0.38
RPL3-216ENST00000484358 KDM3BQ7LBC6 1761 aa17.39■□□□□ 0.37
RPL3-216ENST00000484358 EXOSC9Q06265 439 aaKnown RBP17.39■□□□□ 0.37
RPL3-216ENST00000484358 DDX54Q8TDD1 881 aaKnown RBP17.39■□□□□ 0.37
RPL3-216ENST00000484358 SUPT16HQ9Y5B9 1047 aaKnown RBP17.39■□□□□ 0.37
RPL3-216ENST00000484358 KAT6BQ8WYB5 2073 aa17.39■□□□□ 0.37
RPL3-216ENST00000484358 KDM6AO15550 1401 aaPredicted RBP17.38■□□□□ 0.37
RPL3-216ENST00000484358 BTBD11A6QL63 1104 aa17.38■□□□□ 0.37
RPL3-216ENST00000484358 SEPT12Q8IYM1 358 aa17.38■□□□□ 0.37
RPL3-216ENST00000484358 SLC52A2Q9HAB3 445 aa17.38■□□□□ 0.37
RPL3-216ENST00000484358 LGR6Q9HBX8 967 aa17.38■□□□□ 0.37
RPL3-216ENST00000484358 CACNA1FO60840 1977 aa17.38■□□□□ 0.37
RPL3-216ENST00000484358 A0A0G2JS52 829 aa17.37■□□□□ 0.37
RPL3-216ENST00000484358 CABP4P57796 275 aa17.37■□□□□ 0.37
RPL3-216ENST00000484358 MYT1Q01538 1121 aa17.37■□□□□ 0.37
RPL3-216ENST00000484358 ALDH1L2Q3SY69 923 aa17.36■□□□□ 0.37
RPL3-216ENST00000484358 HOXB7P09629 217 aa17.35■□□□□ 0.37
RPL3-216ENST00000484358 FAM98CQ17RN3 349 aaKnown RBP17.35■□□□□ 0.37
RPL3-216ENST00000484358 TWISTNBQ3B726 338 aaPredicted RBP17.35■□□□□ 0.37
RPL3-216ENST00000484358 RNF123Q5XPI4 1314 aa17.35■□□□□ 0.37
RPL3-216ENST00000484358 RARSP54136 660 aaKnown RBP17.34■□□□□ 0.37
RPL3-216ENST00000484358 KRT27Q7Z3Y8 459 aa17.34■□□□□ 0.37
RPL3-216ENST00000484358 TTC5Q8N0Z6 440 aa17.34■□□□□ 0.37
RPL3-216ENST00000484358 THSD7AQ9UPZ6 1657 aa17.34■□□□□ 0.37
RPL3-216ENST00000484358 BRWD3Q6RI45 1802 aa17.33■□□□□ 0.37
RPL3-216ENST00000484358 SRCAPQ6ZRS2 3230 aa17.33■□□□□ 0.37
RPL3-216ENST00000484358 RRP1P56182 461 aaKnown RBP17.33■□□□□ 0.36
RPL3-216ENST00000484358 KIF16BQ96L93 1317 aa17.32■□□□□ 0.36
RPL3-216ENST00000484358 ONECUT3O60422 494 aaPredicted RBP17.32■□□□□ 0.36
RPL3-216ENST00000484358 MS4A1P11836 297 aa17.32■□□□□ 0.36
RPL3-216ENST00000484358 CANXP27824 592 aaKnown RBP17.32■□□□□ 0.36
RPL3-216ENST00000484358 DEFB132Q7Z7B7 95 aa17.32■□□□□ 0.36
RPL3-216ENST00000484358 NFATC2IPQ8NCF5 419 aa17.32■□□□□ 0.36
RPL3-216ENST00000484358 TMOD3Q9NYL9 352 aa17.32■□□□□ 0.36
RPL3-216ENST00000484358 ITGB4P16144 1822 aa17.31■□□□□ 0.36
RPL3-216ENST00000484358 IPO8O15397 1037 aaKnown RBP17.31■□□□□ 0.36
RPL3-216ENST00000484358 VAMP4O75379 141 aa17.31■□□□□ 0.36
RPL3-216ENST00000484358 ERICH6BQ5W0A0 696 aa17.31■□□□□ 0.36
RPL3-216ENST00000484358 SMC4Q9NTJ3 1288 aa17.31■□□□□ 0.36
RPL3-216ENST00000484358 MIS18AQ9NYP9 233 aa17.31■□□□□ 0.36
RPL3-216ENST00000484358 BRPF1P55201 1214 aaPredicted RBP17.3■□□□□ 0.36
RPL3-216ENST00000484358 ZNF790Q6PG37 636 aa17.3■□□□□ 0.36
RPL3-216ENST00000484358 C8orf58Q8NAV2 365 aa17.3■□□□□ 0.36
RPL3-216ENST00000484358 BAG6P46379 1132 aa17.29■□□□□ 0.36
RPL3-216ENST00000484358 EIF4A1P60842 406 aaKnown RBP17.29■□□□□ 0.36
RPL3-216ENST00000484358 CCDC30Q5VVM6 783 aa17.29■□□□□ 0.36
RPL3-216ENST00000484358 STK31Q9BXU1 1019 aa17.29■□□□□ 0.36
RPL3-216ENST00000484358 TOGARAM1Q9Y4F4 1720 aa17.29■□□□□ 0.36
RPL3-216ENST00000484358 DOT1LQ8TEK3 1739 aa17.28■□□□□ 0.36
RPL3-216ENST00000484358 FMNL2Q96PY5 1086 aa17.28■□□□□ 0.36
RPL3-216ENST00000484358 TSPYL6Q8N831 410 aa17.27■□□□□ 0.36
RPL3-216ENST00000484358 PAPPAQ13219 1627 aa17.27■□□□□ 0.36
RPL3-216ENST00000484358 UBR2Q8IWV8 1755 aa17.26■□□□□ 0.35
RPL3-216ENST00000484358 ELL2O00472 640 aaPredicted RBP17.26■□□□□ 0.35
RPL3-216ENST00000484358 MARCH10Q8NA82 808 aaPredicted RBP17.26■□□□□ 0.35
RPL3-216ENST00000484358 SSH1Q8WYL5 1049 aa17.26■□□□□ 0.35
RPL3-216ENST00000484358 BCL9O00512 1426 aa17.26■□□□□ 0.35
RPL3-216ENST00000484358 BCAR3O75815 825 aa17.25■□□□□ 0.35
RPL3-216ENST00000484358 PDE3AQ14432 1141 aa17.25■□□□□ 0.35
RPL3-216ENST00000484358 ZKSCAN2Q63HK3 967 aa17.25■□□□□ 0.35
RPL3-216ENST00000484358 ARHGAP45Q92619 1136 aa17.25■□□□□ 0.35
RPL3-216ENST00000484358 HEG1Q9ULI3 1381 aa17.25■□□□□ 0.35
RPL3-216ENST00000484358 SNRPA1P09661 255 aaKnown RBP17.24■□□□□ 0.35
RPL3-216ENST00000484358 HDGFL1Q5TGJ6 251 aa17.24■□□□□ 0.35
RPL3-216ENST00000484358 GTF3C3Q9Y5Q9 886 aa17.24■□□□□ 0.35
RPL3-216ENST00000484358 GIGYF1O75420 1035 aaPredicted RBP17.23■□□□□ 0.35
RPL3-216ENST00000484358 FKBP8Q14318 412 aa17.23■□□□□ 0.35
RPL3-216ENST00000484358 FRAT1Q92837 279 aaPredicted RBP17.23■□□□□ 0.35
RPL3-216ENST00000484358 TEX13AQ9BXU3 409 aaPredicted RBP17.23■□□□□ 0.35
RPL3-216ENST00000484358 LAMB4A4D0S4 1761 aa17.23■□□□□ 0.35
RPL3-216ENST00000484358 SLC39A6Q13433 755 aa17.22■□□□□ 0.35
RPL3-216ENST00000484358 FTSJ3Q8IY81 847 aaKnown RBP17.22■□□□□ 0.35
RPL3-216ENST00000484358 VSIG10Q8N0Z9 540 aa17.22■□□□□ 0.35
RPL3-216ENST00000484358 PIGBQ92521 554 aa17.22■□□□□ 0.35
RPL3-216ENST00000484358 SMARCC1Q92922 1105 aaPredicted RBP17.22■□□□□ 0.35
RPL3-216ENST00000484358 SYTL4Q96C24 671 aaPredicted RBP17.22■□□□□ 0.35
RPL3-216ENST00000484358 BCL2L13Q9BXK5 485 aa17.22■□□□□ 0.35
RPL3-216ENST00000484358 PTPRCP08575 1304 aa17.21■□□□□ 0.35
RPL3-216ENST00000484358 KCNQ3O43525 872 aa17.21■□□□□ 0.35
RPL3-216ENST00000484358 PRIM1P49642 420 aaKnown RBP17.21■□□□□ 0.35
RPL3-216ENST00000484358 KRT24Q2M2I5 525 aa17.21■□□□□ 0.35
RPL3-216ENST00000484358 ATF7IPQ6VMQ6 1270 aa17.21■□□□□ 0.35
RPL3-216ENST00000484358 MRPL50Q8N5N7 158 aaKnown RBP17.21■□□□□ 0.35
RPL3-216ENST00000484358 API5Q9BZZ5 524 aaKnown RBP17.21■□□□□ 0.35
RPL3-216ENST00000484358 ZNF496Q96IT1 587 aaPredicted RBP17.2■□□□□ 0.34
RPL3-216ENST00000484358 CHMP4BQ9H444 224 aaKnown RBP17.2■□□□□ 0.34
RPL3-216ENST00000484358 ERBB4Q15303 1308 aa17.2■□□□□ 0.34
RPL3-216ENST00000484358 NHSQ6T4R5 1651 aa17.2■□□□□ 0.34
RPL3-216ENST00000484358 AAMPQ13685 434 aa17.19■□□□□ 0.34
RPL3-216ENST00000484358 DBF4Q9UBU7 674 aaPredicted RBP17.19■□□□□ 0.34
RPL3-216ENST00000484358 NOB1Q9ULX3 412 aaKnown RBP17.19■□□□□ 0.34
RPL3-216ENST00000484358 KCPQ6ZWJ8 1503 aa17.19■□□□□ 0.34
RPL3-216ENST00000484358 PLIN1O60240 522 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms