RNA–Protein interactions for RNA: ENST00000484317.5

DKC1-211, Transcript of dyskerin pseudouridine synthase 1, humanhuman

TSL 2

Gene DKC1, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-211ENST00000484317 ATG3Q9NT62 314 aa13.01□□□□□ -0.33
DKC1-211ENST00000484317 TOGARAM1Q9Y4F4 1720 aa13.01□□□□□ -0.33
DKC1-211ENST00000484317 GNPATO15228 680 aa13□□□□□ -0.33
DKC1-211ENST00000484317 SULT6B1Q6IMI4 303 aa13□□□□□ -0.33
DKC1-211ENST00000484317 LINC00116Q8NCU8 138 aa13□□□□□ -0.33
DKC1-211ENST00000484317 RTCBQ9Y3I0 505 aaKnown RBP13□□□□□ -0.33
DKC1-211ENST00000484317 ADRA2BP18089 450 aa12.99□□□□□ -0.33
DKC1-211ENST00000484317 TRAPPC3LQ5T215 181 aa12.99□□□□□ -0.33
DKC1-211ENST00000484317 RC3H1Q5TC82 1133 aaKnown RBP12.99□□□□□ -0.33
DKC1-211ENST00000484317 NLGN2Q8NFZ4 835 aa12.99□□□□□ -0.33
DKC1-211ENST00000484317 RBM42Q9BTD8 480 aaKnown RBP12.99□□□□□ -0.33
DKC1-211ENST00000484317 KIF7Q2M1P5 1343 aa12.98□□□□□ -0.33
DKC1-211ENST00000484317 IL13P35225 146 aa12.98□□□□□ -0.33
DKC1-211ENST00000484317 AMER1Q5JTC6 1135 aaPredicted RBP12.98□□□□□ -0.33
DKC1-211ENST00000484317 NLGN1Q8N2Q7 840 aa12.98□□□□□ -0.33
DKC1-211ENST00000484317 ITPK1Q13572 414 aa12.97□□□□□ -0.33
DKC1-211ENST00000484317 KDRP35968 1356 aa12.96□□□□□ -0.33
DKC1-211ENST00000484317 UBR3Q6ZT12 1888 aa12.96□□□□□ -0.33
DKC1-211ENST00000484317 RPS6KA4O75676 772 aa12.96□□□□□ -0.33
DKC1-211ENST00000484317 AKAP4Q5JQC9 854 aa12.96□□□□□ -0.33
DKC1-211ENST00000484317 CNTNAP4Q9C0A0 1308 aa12.95□□□□□ -0.34
DKC1-211ENST00000484317 DIAPH1O60610 1272 aaKnown RBP12.95□□□□□ -0.34
DKC1-211ENST00000484317 RFC4P35249 363 aa12.95□□□□□ -0.34
DKC1-211ENST00000484317 AEBP1Q8IUX7 1158 aa12.95□□□□□ -0.34
DKC1-211ENST00000484317 NFATC2IPQ8NCF5 419 aa12.95□□□□□ -0.34
DKC1-211ENST00000484317 ZNF831Q5JPB2 1677 aa12.95□□□□□ -0.34
DKC1-211ENST00000484317 PER1O15534 1290 aaPredicted RBP12.94□□□□□ -0.34
DKC1-211ENST00000484317 NPC1L1Q9UHC9 1359 aa12.94□□□□□ -0.34
DKC1-211ENST00000484317 PTCD1O75127 700 aaKnown RBP12.93□□□□□ -0.34
DKC1-211ENST00000484317 YBX3P16989 372 aaKnown RBP eCLIP12.93□□□□□ -0.34
DKC1-211ENST00000484317 CC2D1BQ5T0F9 858 aaKnown RBP12.93□□□□□ -0.34
DKC1-211ENST00000484317 AMIGO3Q86WK7 504 aa12.93□□□□□ -0.34
DKC1-211ENST00000484317 KDM6AO15550 1401 aaPredicted RBP12.93□□□□□ -0.34
DKC1-211ENST00000484317 MMP10P09238 476 aa12.92□□□□□ -0.34
DKC1-211ENST00000484317 TGFB2P61812 414 aa12.92□□□□□ -0.34
DKC1-211ENST00000484317 ARHGEF1Q92888 912 aaKnown RBP12.92□□□□□ -0.34
DKC1-211ENST00000484317 CCDC87Q9NVE4 849 aa12.92□□□□□ -0.34
DKC1-211ENST00000484317 PARP3Q9Y6F1 533 aa12.92□□□□□ -0.34
DKC1-211ENST00000484317 GIGYF1O75420 1035 aaPredicted RBP12.91□□□□□ -0.34
DKC1-211ENST00000484317 SLC4A9Q96Q91 983 aa12.91□□□□□ -0.34
DKC1-211ENST00000484317 SLC52A2Q9HAB3 445 aa12.91□□□□□ -0.34
DKC1-211ENST00000484317 HMOX1P09601 288 aa12.9□□□□□ -0.34
DKC1-211ENST00000484317 CRKLP46109 303 aaKnown RBP12.9□□□□□ -0.34
DKC1-211ENST00000484317 C1QTNF8P60827 252 aa12.9□□□□□ -0.34
DKC1-211ENST00000484317 SMIM5Q71RC9 77 aa12.9□□□□□ -0.34
DKC1-211ENST00000484317 CFAP53Q96M91 514 aa12.9□□□□□ -0.34
DKC1-211ENST00000484317 RNMTO43148 476 aaKnown RBP12.89□□□□□ -0.35
DKC1-211ENST00000484317 GYS1P13807 737 aa12.88□□□□□ -0.35
DKC1-211ENST00000484317 VSIG10Q8N0Z9 540 aa12.88□□□□□ -0.35
DKC1-211ENST00000484317 GAS2L2Q8NHY3 880 aa12.88□□□□□ -0.35
DKC1-211ENST00000484317 NUDCQ9Y266 331 aa12.88□□□□□ -0.35
DKC1-211ENST00000484317 SCN11AQ9UI33 1791 aa12.88□□□□□ -0.35
DKC1-211ENST00000484317 U2SURPO15042 1029 aaKnown RBP12.87□□□□□ -0.35
DKC1-211ENST00000484317 ZPR1O75312 459 aa12.87□□□□□ -0.35
DKC1-211ENST00000484317 MTHFSDQ2M296 383 aaKnown RBP12.87□□□□□ -0.35
DKC1-211ENST00000484317 TTC5Q8N0Z6 440 aa12.87□□□□□ -0.35
DKC1-211ENST00000484317 LGR6Q9HBX8 967 aa12.87□□□□□ -0.35
DKC1-211ENST00000484317 COL5A3P25940 1745 aaPredicted RBP12.87□□□□□ -0.35
DKC1-211ENST00000484317 GPBP1L1Q9HC44 474 aaPredicted RBP12.86□□□□□ -0.35
DKC1-211ENST00000484317 SENP3-EIF4A1A0A087X0R7 540 aa12.85□□□□□ -0.35
DKC1-211ENST00000484317 GNAT3A8MTJ3 354 aa12.85□□□□□ -0.35
DKC1-211ENST00000484317 STARD3NLO95772 234 aa12.85□□□□□ -0.35
DKC1-211ENST00000484317 TEFQ10587 303 aa12.85□□□□□ -0.35
DKC1-211ENST00000484317 TEX13AQ9BXU3 409 aaPredicted RBP12.85□□□□□ -0.35
DKC1-211ENST00000484317 USP42Q9H9J4 1324 aaKnown RBP12.85□□□□□ -0.35
DKC1-211ENST00000484317 CICQ96RK0 1608 aaPredicted RBP12.84□□□□□ -0.35
DKC1-211ENST00000484317 INTS5Q6P9B9 1019 aaKnown RBP12.84□□□□□ -0.35
DKC1-211ENST00000484317 DNAJC10Q8IXB1 793 aa12.84□□□□□ -0.35
DKC1-211ENST00000484317 BCS1LQ9Y276 419 aa12.84□□□□□ -0.35
DKC1-211ENST00000484317 C10orf71Q711Q0 1435 aa12.83□□□□□ -0.36
DKC1-211ENST00000484317 ATP10DQ9P241 1426 aa12.83□□□□□ -0.36
DKC1-211ENST00000484317 A0A087WZG4 1122 aa12.83□□□□□ -0.36
DKC1-211ENST00000484317 A0A0G2JLW4 131 aa12.83□□□□□ -0.36
DKC1-211ENST00000484317 CYP19A1P11511 503 aaPredicted RBP12.83□□□□□ -0.36
DKC1-211ENST00000484317 SLC39A6Q13433 755 aa12.83□□□□□ -0.36
DKC1-211ENST00000484317 CNGB1Q14028 1251 aaPredicted RBP12.83□□□□□ -0.36
DKC1-211ENST00000484317 NPM2Q86SE8 214 aaKnown RBP12.83□□□□□ -0.36
DKC1-211ENST00000484317 PIM2Q9P1W9 311 aa12.83□□□□□ -0.36
DKC1-211ENST00000484317 MRC1P22897 1456 aa12.83□□□□□ -0.36
DKC1-211ENST00000484317 MYH14Q7Z406 1995 aaKnown RBP12.83□□□□□ -0.36
DKC1-211ENST00000484317 C4AP0C0L4 1744 aa12.82□□□□□ -0.36
DKC1-211ENST00000484317 FCHSD2O94868 740 aa12.82□□□□□ -0.36
DKC1-211ENST00000484317 DPEP1P16444 411 aa12.82□□□□□ -0.36
DKC1-211ENST00000484317 FKBP8Q14318 412 aa12.82□□□□□ -0.36
DKC1-211ENST00000484317 NARFQ9UHQ1 456 aa12.82□□□□□ -0.36
DKC1-211ENST00000484317 KIF13BQ9NQT8 1826 aa12.82□□□□□ -0.36
DKC1-211ENST00000484317 PXDNLA1KZ92 1463 aa12.82□□□□□ -0.36
DKC1-211ENST00000484317 SOS1Q07889 1333 aaPredicted RBP12.82□□□□□ -0.36
DKC1-211ENST00000484317 TM4SF1P30408 202 aa12.81□□□□□ -0.36
DKC1-211ENST00000484317 ARHGAP27Q6ZUM4 889 aa12.81□□□□□ -0.36
DKC1-211ENST00000484317 SRP68Q9UHB9 627 aaKnown RBP12.81□□□□□ -0.36
DKC1-211ENST00000484317 WWC3Q9ULE0 1092 aa12.81□□□□□ -0.36
DKC1-211ENST00000484317 TJP1Q07157 1748 aa12.8□□□□□ -0.36
DKC1-211ENST00000484317 NEFMP07197 916 aa12.8□□□□□ -0.36
DKC1-211ENST00000484317 DALRD3Q5D0E6 543 aaKnown RBP12.8□□□□□ -0.36
DKC1-211ENST00000484317 USPL1Q5W0Q7 1092 aa12.8□□□□□ -0.36
DKC1-211ENST00000484317 ZNF790Q6PG37 636 aa12.8□□□□□ -0.36
DKC1-211ENST00000484317 RTF1Q92541 710 aaKnown RBP12.8□□□□□ -0.36
DKC1-211ENST00000484317 ADCY9O60503 1353 aa12.8□□□□□ -0.36
DKC1-211ENST00000484317 COL3A1P02461 1466 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms