RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 SALL2Q9Y467 1007 aaPredicted RBP12.73□□□□□ -0.37
COL8A1-207ENST00000483969 NRXN3Q9Y4C0 1643 aa12.73□□□□□ -0.37
COL8A1-207ENST00000483969 TONSLQ96HA7 1378 aa12.72□□□□□ -0.37
COL8A1-207ENST00000483969 ROBO2Q9HCK4 1378 aa12.72□□□□□ -0.37
COL8A1-207ENST00000483969 GDF9O60383 454 aa12.72□□□□□ -0.37
COL8A1-207ENST00000483969 MAP2K5Q13163 448 aa12.72□□□□□ -0.37
COL8A1-207ENST00000483969 GRIPAP1Q4V328 841 aa12.72□□□□□ -0.37
COL8A1-207ENST00000483969 WAPLQ7Z5K2 1190 aa12.72□□□□□ -0.37
COL8A1-207ENST00000483969 CCER1Q8TC90 406 aaPredicted RBP12.72□□□□□ -0.37
COL8A1-207ENST00000483969 TRAK1Q9UPV9 953 aa12.72□□□□□ -0.37
COL8A1-207ENST00000483969 SLC27A5Q9Y2P5 690 aa12.72□□□□□ -0.37
COL8A1-207ENST00000483969 YTHDC2Q9H6S0 1430 aaKnown RBP12.71□□□□□ -0.37
COL8A1-207ENST00000483969 PPLO60437 1756 aa12.71□□□□□ -0.37
COL8A1-207ENST00000483969 ZNF787Q6DD87 383 aa12.71□□□□□ -0.37
COL8A1-207ENST00000483969 STRCP1A6NGW2 1772 aa12.71□□□□□ -0.38
COL8A1-207ENST00000483969 PTCH1Q13635 1447 aa12.71□□□□□ -0.38
COL8A1-207ENST00000483969 TNFRSF10AO00220 468 aa12.7□□□□□ -0.38
COL8A1-207ENST00000483969 RPIAP49247 311 aa12.7□□□□□ -0.38
COL8A1-207ENST00000483969 TIMELESSQ9UNS1 1208 aa12.7□□□□□ -0.38
COL8A1-207ENST00000483969 FAM135BQ49AJ0 1406 aa12.7□□□□□ -0.38
COL8A1-207ENST00000483969 PRAG1Q86YV5 1406 aa12.7□□□□□ -0.38
COL8A1-207ENST00000483969 CHD2O14647 1828 aaKnown RBP12.69□□□□□ -0.38
COL8A1-207ENST00000483969 FAM187AA6NFU0 413 aa12.69□□□□□ -0.38
COL8A1-207ENST00000483969 PRAM1Q96QH2 718 aa12.69□□□□□ -0.38
COL8A1-207ENST00000483969 FCF1Q9Y324 198 aaKnown RBP12.69□□□□□ -0.38
COL8A1-207ENST00000483969 TECPR2O15040 1411 aa12.69□□□□□ -0.38
COL8A1-207ENST00000483969 HSPA1LP34931 641 aa12.68□□□□□ -0.38
COL8A1-207ENST00000483969 NBPF1Q3BBV0 1214 aa12.68□□□□□ -0.38
COL8A1-207ENST00000483969 MYT1Q01538 1121 aa12.67□□□□□ -0.38
COL8A1-207ENST00000483969 MSS51Q4VC12 460 aa12.67□□□□□ -0.38
COL8A1-207ENST00000483969 DCCP43146 1447 aa12.67□□□□□ -0.38
COL8A1-207ENST00000483969 ADGRL3Q9HAR2 1447 aa12.67□□□□□ -0.38
COL8A1-207ENST00000483969 SAFB2Q14151 953 aaKnown RBP eCLIP12.66□□□□□ -0.38
COL8A1-207ENST00000483969 BRICD5Q6PL45 260 aa12.66□□□□□ -0.38
COL8A1-207ENST00000483969 VSIG10Q8N0Z9 540 aa12.66□□□□□ -0.38
COL8A1-207ENST00000483969 XRN1Q8IZH2 1706 aaKnown RBP12.65□□□□□ -0.38
COL8A1-207ENST00000483969 IFT172Q9UG01 1749 aa12.65□□□□□ -0.38
COL8A1-207ENST00000483969 Q3C1V9 767 aa12.65□□□□□ -0.38
COL8A1-207ENST00000483969 FAM160A2Q8N612 972 aaPredicted RBP12.65□□□□□ -0.38
COL8A1-207ENST00000483969 PLEKHH1Q9ULM0 1364 aa12.65□□□□□ -0.38
COL8A1-207ENST00000483969 CD46P15529 392 aa12.64□□□□□ -0.39
COL8A1-207ENST00000483969 NBPF8Q3BBV2 869 aa12.64□□□□□ -0.39
COL8A1-207ENST00000483969 BRINP3Q76B58 766 aa12.63□□□□□ -0.39
COL8A1-207ENST00000483969 PRDM9Q9NQV7 894 aa12.63□□□□□ -0.39
COL8A1-207ENST00000483969 PKD2L1Q9P0L9 805 aa12.63□□□□□ -0.39
COL8A1-207ENST00000483969 ASXL1Q8IXJ9 1541 aa12.62□□□□□ -0.39
COL8A1-207ENST00000483969 LAMC1P11047 1609 aa12.62□□□□□ -0.39
COL8A1-207ENST00000483969 ADGRB1O14514 1584 aa12.62□□□□□ -0.39
COL8A1-207ENST00000483969 ROCK2O75116 1388 aaKnown RBP12.62□□□□□ -0.39
COL8A1-207ENST00000483969 CD2BP2O95400 341 aaKnown RBP12.62□□□□□ -0.39
COL8A1-207ENST00000483969 ESCO1Q5FWF5 840 aa12.62□□□□□ -0.39
COL8A1-207ENST00000483969 RNF19BQ6ZMZ0 732 aa12.62□□□□□ -0.39
COL8A1-207ENST00000483969 DLC1Q96QB1 1528 aa12.62□□□□□ -0.39
COL8A1-207ENST00000483969 MINK1Q8N4C8 1332 aaPredicted RBP12.62□□□□□ -0.39
COL8A1-207ENST00000483969 IRF6O14896 467 aa12.61□□□□□ -0.39
COL8A1-207ENST00000483969 FOXC1Q12948 553 aa12.61□□□□□ -0.39
COL8A1-207ENST00000483969 ORAI2Q96SN7 254 aa12.61□□□□□ -0.39
COL8A1-207ENST00000483969 CARD11Q9BXL7 1154 aa12.61□□□□□ -0.39
COL8A1-207ENST00000483969 SETD1AO15047 1707 aaKnown RBP12.61□□□□□ -0.39
COL8A1-207ENST00000483969 MST1RQ04912 1400 aa12.61□□□□□ -0.39
COL8A1-207ENST00000483969 WASLO00401 505 aaPredicted RBP12.6□□□□□ -0.39
COL8A1-207ENST00000483969 HIRIP3Q9BW71 556 aaPredicted RBP12.6□□□□□ -0.39
COL8A1-207ENST00000483969 CENPJQ9HC77 1338 aaPredicted RBP12.6□□□□□ -0.39
COL8A1-207ENST00000483969 C1orf167Q5SNV9 1468 aa12.59□□□□□ -0.39
COL8A1-207ENST00000483969 KDM4AO75164 1064 aa12.59□□□□□ -0.39
COL8A1-207ENST00000483969 USP46P62068 366 aa12.59□□□□□ -0.39
COL8A1-207ENST00000483969 LRRC59Q96AG4 307 aaKnown RBP12.58□□□□□ -0.4
COL8A1-207ENST00000483969 XIRP1Q702N8 1843 aaKnown RBP12.58□□□□□ -0.4
COL8A1-207ENST00000483969 EIF3AQ14152 1382 aaKnown RBP12.57□□□□□ -0.4
COL8A1-207ENST00000483969 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.57□□□□□ -0.4
COL8A1-207ENST00000483969 ZBTB24O43167 697 aaPredicted RBP12.57□□□□□ -0.4
COL8A1-207ENST00000483969 MDM2Q00987 491 aaPredicted RBP12.57□□□□□ -0.4
COL8A1-207ENST00000483969 CDK19Q9BWU1 502 aa12.57□□□□□ -0.4
COL8A1-207ENST00000483969 SLC24A1O60721 1099 aa12.56□□□□□ -0.4
COL8A1-207ENST00000483969 CCDC102AQ96A19 550 aa12.56□□□□□ -0.4
COL8A1-207ENST00000483969 NPHP3Q7Z494 1330 aa12.56□□□□□ -0.4
COL8A1-207ENST00000483969 GPRASP1Q5JY77 1395 aa12.56□□□□□ -0.4
COL8A1-207ENST00000483969 FOXO3O43524 673 aa12.55□□□□□ -0.4
COL8A1-207ENST00000483969 MMP16P51512 607 aa12.55□□□□□ -0.4
COL8A1-207ENST00000483969 PSME1Q06323 249 aa12.55□□□□□ -0.4
COL8A1-207ENST00000483969 CYP4X1Q8N118 509 aa12.55□□□□□ -0.4
COL8A1-207ENST00000483969 SRPK2P78362 688 aaKnown RBP12.54□□□□□ -0.4
COL8A1-207ENST00000483969 CRIPAKQ8N1N5 446 aa12.54□□□□□ -0.4
COL8A1-207ENST00000483969 DDX17Q92841 729 aaKnown RBP12.54□□□□□ -0.4
COL8A1-207ENST00000483969 NUDT16Q96DE0 195 aaKnown RBP12.54□□□□□ -0.4
COL8A1-207ENST00000483969 TOR4AQ9NXH8 423 aa12.54□□□□□ -0.4
COL8A1-207ENST00000483969 KNDC1Q76NI1 1749 aa12.54□□□□□ -0.4
COL8A1-207ENST00000483969 KIAA1210Q9ULL0 1709 aa12.54□□□□□ -0.4
COL8A1-207ENST00000483969 CDC42BPGQ6DT37 1551 aa12.53□□□□□ -0.4
COL8A1-207ENST00000483969 CLCN1P35523 988 aa12.53□□□□□ -0.4
COL8A1-207ENST00000483969 KRT28Q7Z3Y7 464 aa12.53□□□□□ -0.4
COL8A1-207ENST00000483969 USB1Q9BQ65 265 aaKnown RBP12.53□□□□□ -0.4
COL8A1-207ENST00000483969 GPCPD1Q9NPB8 672 aa12.53□□□□□ -0.4
COL8A1-207ENST00000483969 EVC2Q86UK5 1308 aa12.53□□□□□ -0.4
COL8A1-207ENST00000483969 JCADQ9P266 1359 aa12.53□□□□□ -0.4
COL8A1-207ENST00000483969 ANKARQ7Z5J8 1434 aa12.53□□□□□ -0.4
COL8A1-207ENST00000483969 NGDNQ8NEJ9 315 aaKnown RBP12.52□□□□□ -0.41
COL8A1-207ENST00000483969 PMFBP1Q8TBY8 1022 aa12.52□□□□□ -0.41
COL8A1-207ENST00000483969 ZNF775Q96BV0 537 aaPredicted RBP12.52□□□□□ -0.41
COL8A1-207ENST00000483969 AAASQ9NRG9 546 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms