RNA–Protein interactions for RNA: ENST00000483955.1

SHROOM4-204, Transcript of shroom family member 4, humanhuman

TSL 2

Gene SHROOM4, Length 882 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-204ENST00000483955 CEMIPQ8WUJ3 1361 aa11.79□□□□□ -0.52
SHROOM4-204ENST00000483955 SENP3-EIF4A1A0A087X0R7 540 aa11.78□□□□□ -0.52
SHROOM4-204ENST00000483955 CYP27B1O15528 508 aa11.78□□□□□ -0.52
SHROOM4-204ENST00000483955 ONECUT3O60422 494 aaPredicted RBP11.78□□□□□ -0.52
SHROOM4-204ENST00000483955 GOLGA2Q08379 1002 aa11.78□□□□□ -0.52
SHROOM4-204ENST00000483955 DCAF5Q96JK2 942 aa11.78□□□□□ -0.52
SHROOM4-204ENST00000483955 MRC1P22897 1456 aa11.77□□□□□ -0.52
SHROOM4-204ENST00000483955 SCN11AQ9UI33 1791 aa11.77□□□□□ -0.52
SHROOM4-204ENST00000483955 NKX1-1Q15270 411 aaPredicted RBP11.77□□□□□ -0.53
SHROOM4-204ENST00000483955 DDX54Q8TDD1 881 aaKnown RBP11.77□□□□□ -0.53
SHROOM4-204ENST00000483955 KDM6AO15550 1401 aaPredicted RBP11.77□□□□□ -0.53
SHROOM4-204ENST00000483955 E9PSI1 815 aa11.76□□□□□ -0.53
SHROOM4-204ENST00000483955 RNMTO43148 476 aaKnown RBP11.76□□□□□ -0.53
SHROOM4-204ENST00000483955 RXRBP28702 533 aa11.76□□□□□ -0.53
SHROOM4-204ENST00000483955 TEFQ10587 303 aa11.76□□□□□ -0.53
SHROOM4-204ENST00000483955 ERICH6Q7L0X2 663 aa11.76□□□□□ -0.53
SHROOM4-204ENST00000483955 MCM10Q7L590 875 aa11.76□□□□□ -0.53
SHROOM4-204ENST00000483955 MYH16Q9H6N6 1097 aa11.76□□□□□ -0.53
SHROOM4-204ENST00000483955 VIRMAQ69YN4 1812 aaKnown RBP11.76□□□□□ -0.53
SHROOM4-204ENST00000483955 TULP1O00294 542 aaPredicted RBP11.75□□□□□ -0.53
SHROOM4-204ENST00000483955 FXR2P51116 673 aaKnown RBP eCLIP11.75□□□□□ -0.53
SHROOM4-204ENST00000483955 GNAI1P63096 354 aa11.75□□□□□ -0.53
SHROOM4-204ENST00000483955 DCTN1Q14203 1278 aa11.75□□□□□ -0.53
SHROOM4-204ENST00000483955 MPRIPQ6WCQ1 1025 aa11.75□□□□□ -0.53
SHROOM4-204ENST00000483955 SEPT12Q8IYM1 358 aa11.75□□□□□ -0.53
SHROOM4-204ENST00000483955 IL17REQ8NFR9 667 aa11.75□□□□□ -0.53
SHROOM4-204ENST00000483955 IFT57Q9NWB7 429 aa11.75□□□□□ -0.53
SHROOM4-204ENST00000483955 BABAM1Q9NWV8 329 aa11.75□□□□□ -0.53
SHROOM4-204ENST00000483955 ERVV-2B6SEH9 535 aa11.74□□□□□ -0.53
SHROOM4-204ENST00000483955 CFAP44Q96MT7 982 aa11.74□□□□□ -0.53
SHROOM4-204ENST00000483955 THUMPD2Q9BTF0 503 aaKnown RBP11.74□□□□□ -0.53
SHROOM4-204ENST00000483955 RGS17Q9UGC6 210 aaPredicted RBP11.74□□□□□ -0.53
SHROOM4-204ENST00000483955 BCL9O00512 1426 aa11.74□□□□□ -0.53
SHROOM4-204ENST00000483955 SIPA1L3O60292 1781 aaPredicted RBP11.73□□□□□ -0.53
SHROOM4-204ENST00000483955 CENPBP07199 599 aaPredicted RBP11.73□□□□□ -0.53
SHROOM4-204ENST00000483955 SLFN5Q08AF3 891 aa11.73□□□□□ -0.53
SHROOM4-204ENST00000483955 TAF7Q15545 349 aaPredicted RBP11.73□□□□□ -0.53
SHROOM4-204ENST00000483955 VSIG10Q8N0Z9 540 aa11.73□□□□□ -0.53
SHROOM4-204ENST00000483955 SLC52A2Q9HAB3 445 aa11.73□□□□□ -0.53
SHROOM4-204ENST00000483955 TOGARAM1Q9Y4F4 1720 aa11.73□□□□□ -0.53
SHROOM4-204ENST00000483955 DOT1LQ8TEK3 1739 aa11.72□□□□□ -0.53
SHROOM4-204ENST00000483955 RGS12O14924 1447 aa11.72□□□□□ -0.53
SHROOM4-204ENST00000483955 CABP4P57796 275 aa11.72□□□□□ -0.53
SHROOM4-204ENST00000483955 HOMEZQ8IX15 550 aa11.72□□□□□ -0.53
SHROOM4-204ENST00000483955 MARCH10Q8NA82 808 aaPredicted RBP11.72□□□□□ -0.53
SHROOM4-204ENST00000483955 LGR6Q9HBX8 967 aa11.72□□□□□ -0.53
SHROOM4-204ENST00000483955 TSPYL4Q9UJ04 414 aa11.72□□□□□ -0.53
SHROOM4-204ENST00000483955 FANCIQ9NVI1 1328 aa11.71□□□□□ -0.53
SHROOM4-204ENST00000483955 ZNF853P0CG23 659 aa11.71□□□□□ -0.53
SHROOM4-204ENST00000483955 POTEAQ6S8J7 498 aa11.71□□□□□ -0.53
SHROOM4-204ENST00000483955 KRT27Q7Z3Y8 459 aa11.71□□□□□ -0.53
SHROOM4-204ENST00000483955 TMOD3Q9NYL9 352 aa11.71□□□□□ -0.53
SHROOM4-204ENST00000483955 LAS1LQ9Y4W2 734 aaKnown RBP11.71□□□□□ -0.53
SHROOM4-204ENST00000483955 KDM3BQ7LBC6 1761 aa11.7□□□□□ -0.54
SHROOM4-204ENST00000483955 BTBD11A6QL63 1104 aa11.7□□□□□ -0.54
SHROOM4-204ENST00000483955 CHL1O00533 1208 aa11.7□□□□□ -0.54
SHROOM4-204ENST00000483955 DUSP27Q5VZP5 1158 aa11.7□□□□□ -0.54
SHROOM4-204ENST00000483955 TRMT2AQ8IZ69 625 aaKnown RBP11.7□□□□□ -0.54
SHROOM4-204ENST00000483955 CDCA7LQ96GN5 454 aa11.7□□□□□ -0.54
SHROOM4-204ENST00000483955 MBIPQ9NS73 344 aa11.7□□□□□ -0.54
SHROOM4-204ENST00000483955 ZBTB12Q9Y330 459 aaPredicted RBP11.7□□□□□ -0.54
SHROOM4-204ENST00000483955 NHSQ6T4R5 1651 aa11.69□□□□□ -0.54
SHROOM4-204ENST00000483955 PAPPAQ13219 1627 aa11.69□□□□□ -0.54
SHROOM4-204ENST00000483955 PITPNM1O00562 1244 aa11.69□□□□□ -0.54
SHROOM4-204ENST00000483955 BRWD3Q6RI45 1802 aa11.69□□□□□ -0.54
SHROOM4-204ENST00000483955 ITGB4P16144 1822 aa11.68□□□□□ -0.54
SHROOM4-204ENST00000483955 CT47B1P0C2W7 299 aaPredicted RBP11.68□□□□□ -0.54
SHROOM4-204ENST00000483955 EVX2Q03828 476 aa11.68□□□□□ -0.54
SHROOM4-204ENST00000483955 FAM196AQ6ZSG2 479 aa11.68□□□□□ -0.54
SHROOM4-204ENST00000483955 TTC5Q8N0Z6 440 aa11.68□□□□□ -0.54
SHROOM4-204ENST00000483955 NFATC2IPQ8NCF5 419 aa11.68□□□□□ -0.54
SHROOM4-204ENST00000483955 TSR2Q969E8 191 aaKnown RBP11.68□□□□□ -0.54
SHROOM4-204ENST00000483955 SOS1Q07889 1333 aaPredicted RBP11.67□□□□□ -0.54
SHROOM4-204ENST00000483955 SYTL4Q96C24 671 aaPredicted RBP11.67□□□□□ -0.54
SHROOM4-204ENST00000483955 ZNF790Q6PG37 636 aa11.66□□□□□ -0.54
SHROOM4-204ENST00000483955 ZNF428Q96B54 188 aa11.66□□□□□ -0.54
SHROOM4-204ENST00000483955 UBR2Q8IWV8 1755 aa11.65□□□□□ -0.54
SHROOM4-204ENST00000483955 HOXB7P09629 217 aa11.65□□□□□ -0.54
SHROOM4-204ENST00000483955 PRIM1P49642 420 aaKnown RBP11.65□□□□□ -0.54
SHROOM4-204ENST00000483955 PIGBQ92521 554 aa11.65□□□□□ -0.54
SHROOM4-204ENST00000483955 SMARCC1Q92922 1105 aaPredicted RBP11.65□□□□□ -0.54
SHROOM4-204ENST00000483955 ACSBG1Q96GR2 724 aa11.65□□□□□ -0.54
SHROOM4-204ENST00000483955 CHMP4AQ9BY43 222 aa11.65□□□□□ -0.54
SHROOM4-204ENST00000483955 SBF2Q86WG5 1849 aa11.65□□□□□ -0.55
SHROOM4-204ENST00000483955 EIF4A1P60842 406 aaKnown RBP11.64□□□□□ -0.55
SHROOM4-204ENST00000483955 EXOSC9Q06265 439 aaKnown RBP11.64□□□□□ -0.55
SHROOM4-204ENST00000483955 FMNL2Q96PY5 1086 aa11.64□□□□□ -0.55
SHROOM4-204ENST00000483955 MIS18AQ9NYP9 233 aa11.64□□□□□ -0.55
SHROOM4-204ENST00000483955 KCPQ6ZWJ8 1503 aa11.64□□□□□ -0.55
SHROOM4-204ENST00000483955 SLC39A6Q13433 755 aa11.63□□□□□ -0.55
SHROOM4-204ENST00000483955 TWISTNBQ3B726 338 aaPredicted RBP11.63□□□□□ -0.55
SHROOM4-204ENST00000483955 ATF5Q9Y2D1 282 aaPredicted RBP11.63□□□□□ -0.55
SHROOM4-204ENST00000483955 BTAF1O14981 1849 aa11.63□□□□□ -0.55
SHROOM4-204ENST00000483955 LAMB4A4D0S4 1761 aa11.62□□□□□ -0.55
SHROOM4-204ENST00000483955 FAM182BQ5T319 152 aa11.62□□□□□ -0.55
SHROOM4-204ENST00000483955 BCL11BQ9C0K0 894 aaPredicted RBP11.62□□□□□ -0.55
SHROOM4-204ENST00000483955 ATG3Q9NT62 314 aa11.62□□□□□ -0.55
SHROOM4-204ENST00000483955 HEG1Q9ULI3 1381 aa11.62□□□□□ -0.55
SHROOM4-204ENST00000483955 CICQ96RK0 1608 aaPredicted RBP11.61□□□□□ -0.55
SHROOM4-204ENST00000483955 KCNQ3O43525 872 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms