RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 CNTNAP1P78357 1384 aa7.09□□□□□ -1.27
COL17A1-206ENST00000483876 USP31Q70CQ4 1352 aa7.09□□□□□ -1.27
COL17A1-206ENST00000483876 PITPNM2Q9BZ72 1349 aa7.09□□□□□ -1.27
COL17A1-206ENST00000483876 E9PSI1 815 aa7.09□□□□□ -1.27
COL17A1-206ENST00000483876 EXOC5O00471 708 aa7.09□□□□□ -1.27
COL17A1-206ENST00000483876 U2AF1L5P0DN76 240 aaPredicted RBP7.09□□□□□ -1.27
COL17A1-206ENST00000483876 U2AF1Q01081 240 aaKnown RBP eCLIP7.09□□□□□ -1.27
COL17A1-206ENST00000483876 TOM1L2Q6ZVM7 507 aa7.09□□□□□ -1.27
COL17A1-206ENST00000483876 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.09□□□□□ -1.27
COL17A1-206ENST00000483876 PLEKHF1Q96S99 279 aa7.09□□□□□ -1.27
COL17A1-206ENST00000483876 CDCA7Q9BWT1 371 aaPredicted RBP7.09□□□□□ -1.27
COL17A1-206ENST00000483876 RCAN3Q9UKA8 241 aa7.09□□□□□ -1.27
COL17A1-206ENST00000483876 BCS1LQ9Y276 419 aa7.09□□□□□ -1.27
COL17A1-206ENST00000483876 QSER1Q2KHR3 1735 aa7.09□□□□□ -1.27
COL17A1-206ENST00000483876 COL5A2P05997 1499 aaPredicted RBP7.09□□□□□ -1.27
COL17A1-206ENST00000483876 USP6P35125 1406 aa7.09□□□□□ -1.28
COL17A1-206ENST00000483876 VEGFBP49765 207 aa7.08□□□□□ -1.28
COL17A1-206ENST00000483876 HABP4Q5JVS0 413 aaKnown RBP7.08□□□□□ -1.28
COL17A1-206ENST00000483876 DUSP27Q5VZP5 1158 aa7.08□□□□□ -1.28
COL17A1-206ENST00000483876 NUTM2GQ5VZR2 741 aa7.08□□□□□ -1.28
COL17A1-206ENST00000483876 NME9Q86XW9 330 aa7.08□□□□□ -1.28
COL17A1-206ENST00000483876 WWC1Q8IX03 1113 aa7.08□□□□□ -1.28
COL17A1-206ENST00000483876 NGDNQ8NEJ9 315 aaKnown RBP7.08□□□□□ -1.28
COL17A1-206ENST00000483876 CDCA7LQ96GN5 454 aa7.08□□□□□ -1.28
COL17A1-206ENST00000483876 PPP4R2Q9NY27 417 aa7.08□□□□□ -1.28
COL17A1-206ENST00000483876 PDE4DIPQ5VU43 2346 aa7.08□□□□□ -1.28
COL17A1-206ENST00000483876 RGPD8O14715 1765 aaPredicted RBP7.08□□□□□ -1.28
COL17A1-206ENST00000483876 AKAP12Q02952 1782 aa7.08□□□□□ -1.28
COL17A1-206ENST00000483876 MON2Q7Z3U7 1717 aa7.07□□□□□ -1.28
COL17A1-206ENST00000483876 COL3A1P02461 1466 aaPredicted RBP7.07□□□□□ -1.28
COL17A1-206ENST00000483876 VEGFAP15692 232 aaPredicted RBP7.07□□□□□ -1.28
COL17A1-206ENST00000483876 KCNQ4P56696 695 aa7.07□□□□□ -1.28
COL17A1-206ENST00000483876 MCOLN1Q9GZU1 580 aa7.07□□□□□ -1.28
COL17A1-206ENST00000483876 CPDO75976 1380 aa7.07□□□□□ -1.28
COL17A1-206ENST00000483876 KIF24Q5T7B8 1368 aa7.07□□□□□ -1.28
COL17A1-206ENST00000483876 KIF20BQ96Q89 1820 aa7.06□□□□□ -1.28
COL17A1-206ENST00000483876 IL13P35225 146 aa7.06□□□□□ -1.28
COL17A1-206ENST00000483876 MAP2K1Q02750 393 aaPredicted RBP7.06□□□□□ -1.28
COL17A1-206ENST00000483876 CCDC146Q8IYE0 955 aa7.06□□□□□ -1.28
COL17A1-206ENST00000483876 SLC17A8Q8NDX2 589 aa7.06□□□□□ -1.28
COL17A1-206ENST00000483876 RNF181Q9P0P0 153 aa7.06□□□□□ -1.28
COL17A1-206ENST00000483876 SALL2Q9Y467 1007 aaPredicted RBP7.06□□□□□ -1.28
COL17A1-206ENST00000483876 LMO7Q8WWI1 1683 aa7.06□□□□□ -1.28
COL17A1-206ENST00000483876 IL16Q14005 1332 aa7.05□□□□□ -1.28
COL17A1-206ENST00000483876 ITSN1Q15811 1721 aa7.05□□□□□ -1.28
COL17A1-206ENST00000483876 U2SURPO15042 1029 aaKnown RBP7.05□□□□□ -1.28
COL17A1-206ENST00000483876 NEFMP07197 916 aa7.05□□□□□ -1.28
COL17A1-206ENST00000483876 CT47B1P0C2W7 299 aaPredicted RBP7.05□□□□□ -1.28
COL17A1-206ENST00000483876 NHSQ6T4R5 1651 aa7.05□□□□□ -1.28
COL17A1-206ENST00000483876 TNRC6CQ9HCJ0 1690 aaKnown RBP7.05□□□□□ -1.28
COL17A1-206ENST00000483876 ZBTB7CA1YPR0 619 aa7.04□□□□□ -1.28
COL17A1-206ENST00000483876 TMPOP42166 694 aaKnown RBP7.04□□□□□ -1.28
COL17A1-206ENST00000483876 RRP1P56182 461 aaKnown RBP7.04□□□□□ -1.28
COL17A1-206ENST00000483876 SOX10P56693 466 aa7.04□□□□□ -1.28
COL17A1-206ENST00000483876 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.04□□□□□ -1.28
COL17A1-206ENST00000483876 MYH16Q9H6N6 1097 aa7.04□□□□□ -1.28
COL17A1-206ENST00000483876 MAPK8IP3Q9UPT6 1336 aa7.03□□□□□ -1.28
COL17A1-206ENST00000483876 CALD1Q05682 793 aaKnown RBP7.03□□□□□ -1.28
COL17A1-206ENST00000483876 BEGAINQ9BUH8 593 aa7.03□□□□□ -1.28
COL17A1-206ENST00000483876 RSPH6AQ9H0K4 717 aa7.03□□□□□ -1.28
COL17A1-206ENST00000483876 ZNF219Q9P2Y4 722 aaPredicted RBP7.03□□□□□ -1.28
COL17A1-206ENST00000483876 EMILIN1Q9Y6C2 1016 aa7.03□□□□□ -1.28
COL17A1-206ENST00000483876 MAP2P11137 1827 aaKnown RBP7.03□□□□□ -1.28
COL17A1-206ENST00000483876 TUBGCP6Q96RT7 1819 aa7.02□□□□□ -1.29
COL17A1-206ENST00000483876 PPM1GO15355 546 aaPredicted RBP7.02□□□□□ -1.29
COL17A1-206ENST00000483876 FBLN1P23142 703 aa7.02□□□□□ -1.29
COL17A1-206ENST00000483876 FXR1P51114 621 aaKnown RBP eCLIP7.02□□□□□ -1.29
COL17A1-206ENST00000483876 RIPK4P57078 832 aa7.02□□□□□ -1.29
COL17A1-206ENST00000483876 NLRP6P59044 892 aa7.02□□□□□ -1.29
COL17A1-206ENST00000483876 DGKZQ13574 1117 aa7.02□□□□□ -1.29
COL17A1-206ENST00000483876 NBPF15Q8N660 670 aa7.02□□□□□ -1.29
COL17A1-206ENST00000483876 ABTB2Q8N961 1025 aa7.02□□□□□ -1.29
COL17A1-206ENST00000483876 KCNH5Q8NCM2 988 aa7.02□□□□□ -1.29
COL17A1-206ENST00000483876 ZNF428Q96B54 188 aa7.02□□□□□ -1.29
COL17A1-206ENST00000483876 SPINK5Q9NQ38 1064 aaPredicted RBP7.02□□□□□ -1.29
COL17A1-206ENST00000483876 TRIM35Q9UPQ4 493 aa7.02□□□□□ -1.29
COL17A1-206ENST00000483876 A0A0G2JLW4 131 aa7.01□□□□□ -1.29
COL17A1-206ENST00000483876 GCP02774 474 aa7.01□□□□□ -1.29
COL17A1-206ENST00000483876 PRKAR2BP31323 418 aa7.01□□□□□ -1.29
COL17A1-206ENST00000483876 LMOD3Q0VAK6 560 aa7.01□□□□□ -1.29
COL17A1-206ENST00000483876 AAMPQ13685 434 aa7.01□□□□□ -1.29
COL17A1-206ENST00000483876 RRS1Q15050 365 aaKnown RBP7.01□□□□□ -1.29
COL17A1-206ENST00000483876 NFE2L2Q16236 605 aa7.01□□□□□ -1.29
COL17A1-206ENST00000483876 MPNDQ8N594 471 aa7.01□□□□□ -1.29
COL17A1-206ENST00000483876 FLAD1Q8NFF5 587 aa7.01□□□□□ -1.29
COL17A1-206ENST00000483876 MAP3K19Q56UN5 1328 aa7.01□□□□□ -1.29
COL17A1-206ENST00000483876 WDR17Q8IZU2 1322 aa7.01□□□□□ -1.29
COL17A1-206ENST00000483876 USP54Q70EL1 1684 aa7□□□□□ -1.29
COL17A1-206ENST00000483876 FLT4P35916 1363 aa7□□□□□ -1.29
COL17A1-206ENST00000483876 BTAF1O14981 1849 aa7□□□□□ -1.29
COL17A1-206ENST00000483876 GLTPD2A6NH11 291 aa7□□□□□ -1.29
COL17A1-206ENST00000483876 TGFB2P61812 414 aa7□□□□□ -1.29
COL17A1-206ENST00000483876 EIF4A2Q14240 407 aaKnown RBP7□□□□□ -1.29
COL17A1-206ENST00000483876 PDE3AQ14432 1141 aa7□□□□□ -1.29
COL17A1-206ENST00000483876 NEUROD2Q15784 382 aa7□□□□□ -1.29
COL17A1-206ENST00000483876 CHADLQ6NUI6 762 aa7□□□□□ -1.29
COL17A1-206ENST00000483876 PHACTR3Q96KR7 559 aa7□□□□□ -1.29
COL17A1-206ENST00000483876 CCNL1Q9UK58 526 aaPredicted RBP7□□□□□ -1.29
COL17A1-206ENST00000483876 RRP7AQ9Y3A4 280 aaKnown RBP7□□□□□ -1.29
COL17A1-206ENST00000483876 WDR33Q9C0J8 1336 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms