RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 ZNF827Q17R98 1081 aa35.25■■■■□ 3.23
GTF3C4-202ENST00000483873 PLEKHF1Q96S99 279 aa35.25■■■■□ 3.23
GTF3C4-202ENST00000483873 SIPA1L3O60292 1781 aaPredicted RBP35.25■■■■□ 3.23
GTF3C4-202ENST00000483873 SLC15A2Q16348 729 aa35.24■■■■□ 3.23
GTF3C4-202ENST00000483873 SLC52A2Q9HAB3 445 aa35.24■■■■□ 3.23
GTF3C4-202ENST00000483873 CASZ1Q86V15 1759 aa35.24■■■■□ 3.23
GTF3C4-202ENST00000483873 IL17REQ8NFR9 667 aa35.22■■■■□ 3.23
GTF3C4-202ENST00000483873 QSER1Q2KHR3 1735 aa35.2■■■■□ 3.23
GTF3C4-202ENST00000483873 LOC102724428A0A0B4J2F2 783 aa35.2■■■■□ 3.23
GTF3C4-202ENST00000483873 ANP32CO43423 234 aa35.2■■■■□ 3.23
GTF3C4-202ENST00000483873 SIK1P57059 783 aa35.2■■■■□ 3.23
GTF3C4-202ENST00000483873 AKT1S1Q96B36 256 aa35.2■■■■□ 3.23
GTF3C4-202ENST00000483873 C4BP0C0L5 1744 aa35.18■■■■□ 3.22
GTF3C4-202ENST00000483873 CCDC184Q52MB2 194 aa35.18■■■■□ 3.22
GTF3C4-202ENST00000483873 PDGFDQ9GZP0 370 aaPredicted RBP35.18■■■■□ 3.22
GTF3C4-202ENST00000483873 ZNF831Q5JPB2 1677 aa35.17■■■■□ 3.22
GTF3C4-202ENST00000483873 NEFMP07197 916 aa35.16■■■■□ 3.22
GTF3C4-202ENST00000483873 WDR43Q15061 677 aaKnown RBP eCLIP35.16■■■■□ 3.22
GTF3C4-202ENST00000483873 LRP5O75197 1615 aa35.16■■■■□ 3.22
GTF3C4-202ENST00000483873 SLC4A9Q96Q91 983 aa35.15■■■■□ 3.22
GTF3C4-202ENST00000483873 CEMIPQ8WUJ3 1361 aa35.15■■■■□ 3.22
GTF3C4-202ENST00000483873 RBM42Q9BTD8 480 aaKnown RBP35.15■■■■□ 3.22
GTF3C4-202ENST00000483873 PNNQ9H307 717 aaKnown RBP35.15■■■■□ 3.22
GTF3C4-202ENST00000483873 MAPK8IP3Q9UPT6 1336 aa35.14■■■■□ 3.22
GTF3C4-202ENST00000483873 COL5A3P25940 1745 aaPredicted RBP35.14■■■■□ 3.22
GTF3C4-202ENST00000483873 ITPK1Q13572 414 aa35.14■■■■□ 3.22
GTF3C4-202ENST00000483873 UBR2Q8IWV8 1755 aa35.13■■■■□ 3.21
GTF3C4-202ENST00000483873 ATP6V1AP38606 617 aa35.13■■■■□ 3.21
GTF3C4-202ENST00000483873 SLC39A6Q13433 755 aa35.13■■■■□ 3.21
GTF3C4-202ENST00000483873 MCM10Q7L590 875 aa35.13■■■■□ 3.21
GTF3C4-202ENST00000483873 ADAMTS8Q9UP79 889 aa35.13■■■■□ 3.21
GTF3C4-202ENST00000483873 PTCD1O75127 700 aaKnown RBP35.12■■■■□ 3.21
GTF3C4-202ENST00000483873 DCTN1Q14203 1278 aa35.12■■■■□ 3.21
GTF3C4-202ENST00000483873 CCDC146Q8IYE0 955 aa35.12■■■■□ 3.21
GTF3C4-202ENST00000483873 TJP1Q07157 1748 aa35.12■■■■□ 3.21
GTF3C4-202ENST00000483873 TEFQ10587 303 aa35.11■■■■□ 3.21
GTF3C4-202ENST00000483873 NFE2L2Q16236 605 aa35.11■■■■□ 3.21
GTF3C4-202ENST00000483873 LINC00116Q8NCU8 138 aa35.11■■■■□ 3.21
GTF3C4-202ENST00000483873 RTF1Q92541 710 aaKnown RBP35.1■■■■□ 3.21
GTF3C4-202ENST00000483873 KCPQ6ZWJ8 1503 aa35.1■■■■□ 3.21
GTF3C4-202ENST00000483873 UBR3Q6ZT12 1888 aa35.09■■■■□ 3.21
GTF3C4-202ENST00000483873 TFCP2L1Q9NZI6 479 aa35.08■■■■□ 3.21
GTF3C4-202ENST00000483873 CICQ96RK0 1608 aaPredicted RBP35.08■■■■□ 3.21
GTF3C4-202ENST00000483873 PNPLA7Q6ZV29 1317 aa35.07■■■■□ 3.2
GTF3C4-202ENST00000483873 HTATSF1O43719 755 aaKnown RBP35.06■■■■□ 3.2
GTF3C4-202ENST00000483873 MYH14Q7Z406 1995 aaKnown RBP35.03■■■■□ 3.2
GTF3C4-202ENST00000483873 ZBTB7AO95365 584 aa35.02■■■■□ 3.2
GTF3C4-202ENST00000483873 AMIGO3Q86WK7 504 aa35.02■■■■□ 3.2
GTF3C4-202ENST00000483873 RUNDC1Q96C34 613 aa35.02■■■■□ 3.2
GTF3C4-202ENST00000483873 AK7Q96M32 723 aa35.02■■■■□ 3.2
GTF3C4-202ENST00000483873 TMPOP42166 694 aaKnown RBP35■■■■□ 3.19
GTF3C4-202ENST00000483873 SMIM5Q71RC9 77 aa35■■■■□ 3.19
GTF3C4-202ENST00000483873 MRS2Q9HD23 443 aa35■■■■□ 3.19
GTF3C4-202ENST00000483873 RRP7AQ9Y3A4 280 aaKnown RBP35■■■■□ 3.19
GTF3C4-202ENST00000483873 HMGB2P26583 209 aaKnown RBP34.99■■■■□ 3.19
GTF3C4-202ENST00000483873 THUMPD2Q9BTF0 503 aaKnown RBP34.99■■■■□ 3.19
GTF3C4-202ENST00000483873 RIPK4P57078 832 aa34.98■■■■□ 3.19
GTF3C4-202ENST00000483873 ZNF790Q6PG37 636 aa34.98■■■■□ 3.19
GTF3C4-202ENST00000483873 BTBD11A6QL63 1104 aa34.98■■■■□ 3.19
GTF3C4-202ENST00000483873 TTC5Q8N0Z6 440 aa34.98■■■■□ 3.19
GTF3C4-202ENST00000483873 KCNQ3O43525 872 aa34.97■■■■□ 3.19
GTF3C4-202ENST00000483873 COL23A1Q86Y22 540 aaPredicted RBP34.97■■■■□ 3.19
GTF3C4-202ENST00000483873 DNAJC10Q8IXB1 793 aa34.96■■■■□ 3.19
GTF3C4-202ENST00000483873 KDM3BQ7LBC6 1761 aa34.95■■■■□ 3.19
GTF3C4-202ENST00000483873 NEUROD2Q15784 382 aa34.95■■■■□ 3.19
GTF3C4-202ENST00000483873 SPON1Q9HCB6 807 aa34.95■■■■□ 3.19
GTF3C4-202ENST00000483873 ATF5Q9Y2D1 282 aaPredicted RBP34.95■■■■□ 3.19
GTF3C4-202ENST00000483873 GNPATO15228 680 aa34.94■■■■□ 3.18
GTF3C4-202ENST00000483873 ZNF496Q96IT1 587 aaPredicted RBP34.94■■■■□ 3.18
GTF3C4-202ENST00000483873 PHF14O94880 888 aa34.93■■■■□ 3.18
GTF3C4-202ENST00000483873 PNISRQ8TF01 805 aaKnown RBP34.93■■■■□ 3.18
GTF3C4-202ENST00000483873 CNTNAP4Q9C0A0 1308 aa34.93■■■■□ 3.18
GTF3C4-202ENST00000483873 MTFR1LQ9H019 292 aa34.92■■■■□ 3.18
GTF3C4-202ENST00000483873 MSH5O43196 834 aa34.91■■■■□ 3.18
GTF3C4-202ENST00000483873 TAF7Q15545 349 aaPredicted RBP34.91■■■■□ 3.18
GTF3C4-202ENST00000483873 COL24A1Q17RW2 1714 aa34.91■■■■□ 3.18
GTF3C4-202ENST00000483873 HEG1Q9ULI3 1381 aa34.9■■■■□ 3.18
GTF3C4-202ENST00000483873 RC3H1Q5TC82 1133 aaKnown RBP34.9■■■■□ 3.18
GTF3C4-202ENST00000483873 MIS18AQ9NYP9 233 aa34.9■■■■□ 3.18
GTF3C4-202ENST00000483873 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.89■■■■□ 3.18
GTF3C4-202ENST00000483873 CRKLP46109 303 aaKnown RBP34.89■■■■□ 3.18
GTF3C4-202ENST00000483873 VSIG10Q8N0Z9 540 aa34.89■■■■□ 3.18
GTF3C4-202ENST00000483873 C4AP0C0L4 1744 aa34.88■■■■□ 3.17
GTF3C4-202ENST00000483873 SSFA2P28290 1259 aa34.88■■■■□ 3.17
GTF3C4-202ENST00000483873 PTGER2P43116 358 aa34.87■■■■□ 3.17
GTF3C4-202ENST00000483873 FLAD1Q8NFF5 587 aa34.87■■■■□ 3.17
GTF3C4-202ENST00000483873 SLC16A10Q8TF71 515 aa34.87■■■■□ 3.17
GTF3C4-202ENST00000483873 FMNL2Q96PY5 1086 aa34.87■■■■□ 3.17
GTF3C4-202ENST00000483873 TRIM35Q9UPQ4 493 aa34.87■■■■□ 3.17
GTF3C4-202ENST00000483873 APAF1O14727 1248 aa34.86■■■■□ 3.17
GTF3C4-202ENST00000483873 CYP19A1P11511 503 aaPredicted RBP34.86■■■■□ 3.17
GTF3C4-202ENST00000483873 LMOD3Q0VAK6 560 aa34.86■■■■□ 3.17
GTF3C4-202ENST00000483873 RTCBQ9Y3I0 505 aaKnown RBP34.85■■■■□ 3.17
GTF3C4-202ENST00000483873 DIEXFQ68CQ4 756 aaKnown RBP34.84■■■■□ 3.17
GTF3C4-202ENST00000483873 INTS5Q6P9B9 1019 aaKnown RBP34.84■■■■□ 3.17
GTF3C4-202ENST00000483873 RPS6KA4O75676 772 aa34.83■■■■□ 3.17
GTF3C4-202ENST00000483873 SGIP1Q9BQI5 828 aa34.83■■■■□ 3.17
GTF3C4-202ENST00000483873 MSL1Q68DK7 614 aa34.81■■■■□ 3.16
GTF3C4-202ENST00000483873 CCDC87Q9NVE4 849 aa34.81■■■■□ 3.16
GTF3C4-202ENST00000483873 SENP3-EIF4A1A0A087X0R7 540 aa34.8■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms