RNA–Protein interactions for RNA: ENST00000483827.1

ZC3HC1-210, Transcript of zinc finger C3HC-type containing 1, humanhuman

TSL 5

Gene ZC3HC1, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1-210ENST00000483827 ITPK1Q13572 414 aa19.91■□□□□ 0.78
ZC3HC1-210ENST00000483827 AKAP4Q5JQC9 854 aa19.91■□□□□ 0.78
ZC3HC1-210ENST00000483827 COL23A1Q86Y22 540 aaPredicted RBP19.91■□□□□ 0.78
ZC3HC1-210ENST00000483827 NFATC2IPQ8NCF5 419 aa19.91■□□□□ 0.78
ZC3HC1-210ENST00000483827 LINC00116Q8NCU8 138 aa19.91■□□□□ 0.78
ZC3HC1-210ENST00000483827 ATP6V1AP38606 617 aa19.9■□□□□ 0.78
ZC3HC1-210ENST00000483827 SMIM5Q71RC9 77 aa19.9■□□□□ 0.78
ZC3HC1-210ENST00000483827 AMIGO3Q86WK7 504 aa19.9■□□□□ 0.78
ZC3HC1-210ENST00000483827 CFAP53Q96M91 514 aa19.9■□□□□ 0.78
ZC3HC1-210ENST00000483827 LGR6Q9HBX8 967 aa19.9■□□□□ 0.78
ZC3HC1-210ENST00000483827 UBR3Q6ZT12 1888 aa19.9■□□□□ 0.78
ZC3HC1-210ENST00000483827 SLC16A10Q8TF71 515 aa19.89■□□□□ 0.77
ZC3HC1-210ENST00000483827 SLC4A9Q96Q91 983 aa19.89■□□□□ 0.77
ZC3HC1-210ENST00000483827 RBM42Q9BTD8 480 aaKnown RBP19.89■□□□□ 0.77
ZC3HC1-210ENST00000483827 COL24A1Q17RW2 1714 aa19.88■□□□□ 0.77
ZC3HC1-210ENST00000483827 AK7Q96M32 723 aa19.88■□□□□ 0.77
ZC3HC1-210ENST00000483827 PPP4R3CPQ6ZMV5 832 aa19.87■□□□□ 0.77
ZC3HC1-210ENST00000483827 RNMTO43148 476 aaKnown RBP19.86■□□□□ 0.77
ZC3HC1-210ENST00000483827 DDX10Q13206 875 aaKnown RBP19.86■□□□□ 0.77
ZC3HC1-210ENST00000483827 ARXQ96QS3 562 aa19.86■□□□□ 0.77
ZC3HC1-210ENST00000483827 FHDC1Q9C0D6 1143 aaPredicted RBP19.86■□□□□ 0.77
ZC3HC1-210ENST00000483827 ADAMTS7Q9UKP4 1686 aa19.85■□□□□ 0.77
ZC3HC1-210ENST00000483827 PTCD1O75127 700 aaKnown RBP19.85■□□□□ 0.77
ZC3HC1-210ENST00000483827 PHF14O94880 888 aa19.85■□□□□ 0.77
ZC3HC1-210ENST00000483827 HMGB2P26583 209 aaKnown RBP19.85■□□□□ 0.77
ZC3HC1-210ENST00000483827 MSL1Q68DK7 614 aa19.85■□□□□ 0.77
ZC3HC1-210ENST00000483827 RSPH6AQ9H0K4 717 aa19.85■□□□□ 0.77
ZC3HC1-210ENST00000483827 SLC52A2Q9HAB3 445 aa19.85■□□□□ 0.77
ZC3HC1-210ENST00000483827 ZNF831Q5JPB2 1677 aa19.84■□□□□ 0.77
ZC3HC1-210ENST00000483827 PRKAR2BP31323 418 aa19.84■□□□□ 0.77
ZC3HC1-210ENST00000483827 PHACTR3Q96KR7 559 aa19.84■□□□□ 0.77
ZC3HC1-210ENST00000483827 NUDCQ9Y266 331 aa19.84■□□□□ 0.77
ZC3HC1-210ENST00000483827 COL5A3P25940 1745 aaPredicted RBP19.84■□□□□ 0.77
ZC3HC1-210ENST00000483827 MRC1P22897 1456 aa19.84■□□□□ 0.77
ZC3HC1-210ENST00000483827 UTRNP46939 3433 aa19.83■□□□□ 0.77
ZC3HC1-210ENST00000483827 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.83■□□□□ 0.77
ZC3HC1-210ENST00000483827 GNPATO15228 680 aa19.83■□□□□ 0.77
ZC3HC1-210ENST00000483827 U2AF1L5P0DN76 240 aaPredicted RBP19.83■□□□□ 0.77
ZC3HC1-210ENST00000483827 U2AF1Q01081 240 aaKnown RBP eCLIP19.83■□□□□ 0.77
ZC3HC1-210ENST00000483827 FLAD1Q8NFF5 587 aa19.83■□□□□ 0.77
ZC3HC1-210ENST00000483827 POLD1P28340 1107 aa19.82■□□□□ 0.76
ZC3HC1-210ENST00000483827 SYT17Q9BSW7 474 aa19.82■□□□□ 0.76
ZC3HC1-210ENST00000483827 MYH14Q7Z406 1995 aaKnown RBP19.82■□□□□ 0.76
ZC3HC1-210ENST00000483827 GOLGB1Q14789 3259 aaKnown RBP19.82■□□□□ 0.76
ZC3HC1-210ENST00000483827 SLC39A6Q13433 755 aa19.81■□□□□ 0.76
ZC3HC1-210ENST00000483827 GAS2L2Q8NHY3 880 aa19.81■□□□□ 0.76
ZC3HC1-210ENST00000483827 MAP3K5Q99683 1374 aa19.81■□□□□ 0.76
ZC3HC1-210ENST00000483827 TJP1Q07157 1748 aa19.8■□□□□ 0.76
ZC3HC1-210ENST00000483827 SSFA2P28290 1259 aa19.8■□□□□ 0.76
ZC3HC1-210ENST00000483827 KLHL34Q8N239 644 aa19.8■□□□□ 0.76
ZC3HC1-210ENST00000483827 GNAT3A8MTJ3 354 aa19.79■□□□□ 0.76
ZC3HC1-210ENST00000483827 IL17REQ8NFR9 667 aa19.79■□□□□ 0.76
ZC3HC1-210ENST00000483827 FCHSD2O94868 740 aa19.77■□□□□ 0.76
ZC3HC1-210ENST00000483827 CNTNAP4Q9C0A0 1308 aa19.76■□□□□ 0.75
ZC3HC1-210ENST00000483827 KCPQ6ZWJ8 1503 aa19.76■□□□□ 0.75
ZC3HC1-210ENST00000483827 SIPA1L3O60292 1781 aaPredicted RBP19.76■□□□□ 0.75
ZC3HC1-210ENST00000483827 RC3H1Q5TC82 1133 aaKnown RBP19.76■□□□□ 0.75
ZC3HC1-210ENST00000483827 RTCBQ9Y3I0 505 aaKnown RBP19.76■□□□□ 0.75
ZC3HC1-210ENST00000483827 CICQ96RK0 1608 aaPredicted RBP19.76■□□□□ 0.75
ZC3HC1-210ENST00000483827 RALBP1Q15311 655 aa19.75■□□□□ 0.75
ZC3HC1-210ENST00000483827 UBR2Q8IWV8 1755 aa19.75■□□□□ 0.75
ZC3HC1-210ENST00000483827 CRKLP46109 303 aaKnown RBP19.74■□□□□ 0.75
ZC3HC1-210ENST00000483827 TEFQ10587 303 aa19.74■□□□□ 0.75
ZC3HC1-210ENST00000483827 DNAJC10Q8IXB1 793 aa19.74■□□□□ 0.75
ZC3HC1-210ENST00000483827 RPS6KA4O75676 772 aa19.73■□□□□ 0.75
ZC3HC1-210ENST00000483827 TRAPPC3LQ5T215 181 aa19.73■□□□□ 0.75
ZC3HC1-210ENST00000483827 ARHGEF1Q92888 912 aaKnown RBP19.73■□□□□ 0.75
ZC3HC1-210ENST00000483827 CEMIPQ8WUJ3 1361 aa19.72■□□□□ 0.75
ZC3HC1-210ENST00000483827 DCAF8L1A6NGE4 600 aa19.72■□□□□ 0.75
ZC3HC1-210ENST00000483827 C4AP0C0L4 1744 aa19.72■□□□□ 0.75
ZC3HC1-210ENST00000483827 ZEB1P37275 1124 aaPredicted RBP19.72■□□□□ 0.75
ZC3HC1-210ENST00000483827 NLGN2Q8NFZ4 835 aa19.72■□□□□ 0.75
ZC3HC1-210ENST00000483827 INTS5Q6P9B9 1019 aaKnown RBP19.71■□□□□ 0.75
ZC3HC1-210ENST00000483827 DCTN1Q14203 1278 aa19.7■□□□□ 0.74
ZC3HC1-210ENST00000483827 MCM10Q7L590 875 aa19.7■□□□□ 0.74
ZC3HC1-210ENST00000483827 TTC5Q8N0Z6 440 aa19.7■□□□□ 0.74
ZC3HC1-210ENST00000483827 DLG5Q8TDM6 1919 aa19.7■□□□□ 0.74
ZC3HC1-210ENST00000483827 CYP19A1P11511 503 aaPredicted RBP19.69■□□□□ 0.74
ZC3HC1-210ENST00000483827 ZNF790Q6PG37 636 aa19.69■□□□□ 0.74
ZC3HC1-210ENST00000483827 KCNQ3O43525 872 aa19.68■□□□□ 0.74
ZC3HC1-210ENST00000483827 RFC4P35249 363 aa19.68■□□□□ 0.74
ZC3HC1-210ENST00000483827 RTF1Q92541 710 aaKnown RBP19.68■□□□□ 0.74
ZC3HC1-210ENST00000483827 ZNF496Q96IT1 587 aaPredicted RBP19.68■□□□□ 0.74
ZC3HC1-210ENST00000483827 PLEKHF1Q96S99 279 aa19.68■□□□□ 0.74
ZC3HC1-210ENST00000483827 CCDC87Q9NVE4 849 aa19.68■□□□□ 0.74
ZC3HC1-210ENST00000483827 MYBBP1AQ9BQG0 1328 aaKnown RBP19.68■□□□□ 0.74
ZC3HC1-210ENST00000483827 SRP68Q9UHB9 627 aaKnown RBP19.67■□□□□ 0.74
ZC3HC1-210ENST00000483827 MMP10P09238 476 aa19.66■□□□□ 0.74
ZC3HC1-210ENST00000483827 GYS1P13807 737 aa19.66■□□□□ 0.74
ZC3HC1-210ENST00000483827 VSIG10Q8N0Z9 540 aa19.66■□□□□ 0.74
ZC3HC1-210ENST00000483827 BTBD11A6QL63 1104 aa19.65■□□□□ 0.74
ZC3HC1-210ENST00000483827 ZBTB1Q9Y2K1 713 aa19.65■□□□□ 0.74
ZC3HC1-210ENST00000483827 HEG1Q9ULI3 1381 aa19.65■□□□□ 0.74
ZC3HC1-210ENST00000483827 NEFMP07197 916 aa19.64■□□□□ 0.73
ZC3HC1-210ENST00000483827 PELP1Q8IZL8 1130 aaKnown RBP19.64■□□□□ 0.73
ZC3HC1-210ENST00000483827 NLGN1Q8N2Q7 840 aa19.64■□□□□ 0.73
ZC3HC1-210ENST00000483827 CD2APQ9Y5K6 639 aa19.64■□□□□ 0.73
ZC3HC1-210ENST00000483827 SOS1Q07889 1333 aaPredicted RBP19.64■□□□□ 0.73
ZC3HC1-210ENST00000483827 USP42Q9H9J4 1324 aaKnown RBP19.63■□□□□ 0.73
ZC3HC1-210ENST00000483827 HTATSF1O43719 755 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms