RNA–Protein interactions for RNA: ENST00000483708.1

COMMD2-205, Transcript of COMM domain containing 2, humanhuman

TSL 3

Gene COMMD2, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-205ENST00000483708 MTFR1LQ9H019 292 aa16.79■□□□□ 0.28
COMMD2-205ENST00000483708 RSPH6AQ9H0K4 717 aa16.79■□□□□ 0.28
COMMD2-205ENST00000483708 FCHSD2O94868 740 aa16.78■□□□□ 0.28
COMMD2-205ENST00000483708 PHACTR3Q96KR7 559 aa16.78■□□□□ 0.28
COMMD2-205ENST00000483708 PNPLA7Q6ZV29 1317 aa16.77■□□□□ 0.28
COMMD2-205ENST00000483708 SLC16A10Q8TF71 515 aa16.77■□□□□ 0.28
COMMD2-205ENST00000483708 AK7Q96M32 723 aa16.77■□□□□ 0.28
COMMD2-205ENST00000483708 SLC52A2Q9HAB3 445 aa16.77■□□□□ 0.28
COMMD2-205ENST00000483708 GNAT3A8MTJ3 354 aa16.76■□□□□ 0.27
COMMD2-205ENST00000483708 ITPK1Q13572 414 aa16.76■□□□□ 0.27
COMMD2-205ENST00000483708 LINC00116Q8NCU8 138 aa16.76■□□□□ 0.27
COMMD2-205ENST00000483708 PTCD1O75127 700 aaKnown RBP16.75■□□□□ 0.27
COMMD2-205ENST00000483708 PTGER2P43116 358 aa16.75■□□□□ 0.27
COMMD2-205ENST00000483708 COL23A1Q86Y22 540 aaPredicted RBP16.75■□□□□ 0.27
COMMD2-205ENST00000483708 FLAD1Q8NFF5 587 aa16.75■□□□□ 0.27
COMMD2-205ENST00000483708 SLC4A9Q96Q91 983 aa16.74■□□□□ 0.27
COMMD2-205ENST00000483708 TOGARAM1Q9Y4F4 1720 aa16.73■□□□□ 0.27
COMMD2-205ENST00000483708 IL17REQ8NFR9 667 aa16.73■□□□□ 0.27
COMMD2-205ENST00000483708 PAPPAQ13219 1627 aa16.73■□□□□ 0.27
COMMD2-205ENST00000483708 LRP5O75197 1615 aa16.72■□□□□ 0.27
COMMD2-205ENST00000483708 NEFMP07197 916 aa16.72■□□□□ 0.27
COMMD2-205ENST00000483708 MYBBP1AQ9BQG0 1328 aaKnown RBP16.71■□□□□ 0.27
COMMD2-205ENST00000483708 ZNF316A6NFI3 1004 aaPredicted RBP16.71■□□□□ 0.27
COMMD2-205ENST00000483708 PHF14O94880 888 aa16.71■□□□□ 0.27
COMMD2-205ENST00000483708 POLD1P28340 1107 aa16.71■□□□□ 0.27
COMMD2-205ENST00000483708 TEFQ10587 303 aa16.71■□□□□ 0.27
COMMD2-205ENST00000483708 SLC39A6Q13433 755 aa16.71■□□□□ 0.27
COMMD2-205ENST00000483708 SMIM5Q71RC9 77 aa16.71■□□□□ 0.27
COMMD2-205ENST00000483708 SGIP1Q9BQI5 828 aa16.71■□□□□ 0.27
COMMD2-205ENST00000483708 PNNQ9H307 717 aaKnown RBP16.71■□□□□ 0.27
COMMD2-205ENST00000483708 MAP3K5Q99683 1374 aa16.71■□□□□ 0.27
COMMD2-205ENST00000483708 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.7■□□□□ 0.26
COMMD2-205ENST00000483708 GNPATO15228 680 aa16.7■□□□□ 0.26
COMMD2-205ENST00000483708 AMIGO3Q86WK7 504 aa16.7■□□□□ 0.26
COMMD2-205ENST00000483708 CNKSR2Q8WXI2 1034 aa16.7■□□□□ 0.26
COMMD2-205ENST00000483708 RTF1Q92541 710 aaKnown RBP16.7■□□□□ 0.26
COMMD2-205ENST00000483708 ARXQ96QS3 562 aa16.7■□□□□ 0.26
COMMD2-205ENST00000483708 SSFA2P28290 1259 aa16.69■□□□□ 0.26
COMMD2-205ENST00000483708 RC3H1Q5TC82 1133 aaKnown RBP16.69■□□□□ 0.26
COMMD2-205ENST00000483708 PRKRIP1Q9H875 184 aaPredicted RBP16.69■□□□□ 0.26
COMMD2-205ENST00000483708 LY75O60449 1722 aa16.69■□□□□ 0.26
COMMD2-205ENST00000483708 RTCBQ9Y3I0 505 aaKnown RBP16.68■□□□□ 0.26
COMMD2-205ENST00000483708 TRAPPC3LQ5T215 181 aa16.67■□□□□ 0.26
COMMD2-205ENST00000483708 MSL1Q68DK7 614 aa16.67■□□□□ 0.26
COMMD2-205ENST00000483708 TTC5Q8N0Z6 440 aa16.67■□□□□ 0.26
COMMD2-205ENST00000483708 PLEKHF1Q96S99 279 aa16.67■□□□□ 0.26
COMMD2-205ENST00000483708 CASZ1Q86V15 1759 aa16.66■□□□□ 0.26
COMMD2-205ENST00000483708 ITGB4P16144 1822 aa16.66■□□□□ 0.26
COMMD2-205ENST00000483708 HTATSF1O43719 755 aaKnown RBP16.66■□□□□ 0.26
COMMD2-205ENST00000483708 MCM10Q7L590 875 aa16.66■□□□□ 0.26
COMMD2-205ENST00000483708 FHDC1Q9C0D6 1143 aaPredicted RBP16.66■□□□□ 0.26
COMMD2-205ENST00000483708 BTBD11A6QL63 1104 aa16.65■□□□□ 0.26
COMMD2-205ENST00000483708 RPS6KA4O75676 772 aa16.65■□□□□ 0.26
COMMD2-205ENST00000483708 DNAJC10Q8IXB1 793 aa16.65■□□□□ 0.26
COMMD2-205ENST00000483708 CNTNAP4Q9C0A0 1308 aa16.65■□□□□ 0.26
COMMD2-205ENST00000483708 MAPK8IP3Q9UPT6 1336 aa16.65■□□□□ 0.26
COMMD2-205ENST00000483708 CRKLP46109 303 aaKnown RBP16.64■□□□□ 0.25
COMMD2-205ENST00000483708 DCTN1Q14203 1278 aa16.64■□□□□ 0.25
COMMD2-205ENST00000483708 ZNF790Q6PG37 636 aa16.64■□□□□ 0.25
COMMD2-205ENST00000483708 VSIG10Q8N0Z9 540 aa16.64■□□□□ 0.25
COMMD2-205ENST00000483708 ARHGEF1Q92888 912 aaKnown RBP16.64■□□□□ 0.25
COMMD2-205ENST00000483708 SYT17Q9BSW7 474 aa16.64■□□□□ 0.25
COMMD2-205ENST00000483708 CEMIPQ8WUJ3 1361 aa16.64■□□□□ 0.25
COMMD2-205ENST00000483708 WDR43Q15061 677 aaKnown RBP eCLIP16.63■□□□□ 0.25
COMMD2-205ENST00000483708 NFE2L2Q16236 605 aa16.63■□□□□ 0.25
COMMD2-205ENST00000483708 DCAF8L1A6NGE4 600 aa16.62■□□□□ 0.25
COMMD2-205ENST00000483708 RFC4P35249 363 aa16.62■□□□□ 0.25
COMMD2-205ENST00000483708 INTS5Q6P9B9 1019 aaKnown RBP16.62■□□□□ 0.25
COMMD2-205ENST00000483708 KLHL34Q8N239 644 aa16.62■□□□□ 0.25
COMMD2-205ENST00000483708 ZNF496Q96IT1 587 aaPredicted RBP16.62■□□□□ 0.25
COMMD2-205ENST00000483708 C4BP0C0L5 1744 aa16.62■□□□□ 0.25
COMMD2-205ENST00000483708 MRC1P22897 1456 aa16.61■□□□□ 0.25
COMMD2-205ENST00000483708 CYP19A1P11511 503 aaPredicted RBP16.61■□□□□ 0.25
COMMD2-205ENST00000483708 TAF7Q15545 349 aaPredicted RBP16.61■□□□□ 0.25
COMMD2-205ENST00000483708 FMNL2Q96PY5 1086 aa16.61■□□□□ 0.25
COMMD2-205ENST00000483708 CCDC87Q9NVE4 849 aa16.61■□□□□ 0.25
COMMD2-205ENST00000483708 KCNQ3O43525 872 aa16.6■□□□□ 0.25
COMMD2-205ENST00000483708 STARD3NLO95772 234 aa16.6■□□□□ 0.25
COMMD2-205ENST00000483708 TEX13AQ9BXU3 409 aaPredicted RBP16.6■□□□□ 0.25
COMMD2-205ENST00000483708 ADAMTS8Q9UP79 889 aa16.6■□□□□ 0.25
COMMD2-205ENST00000483708 C5P01031 1676 aa16.59■□□□□ 0.25
COMMD2-205ENST00000483708 HOXD11P31277 338 aaPredicted RBP16.59■□□□□ 0.25
COMMD2-205ENST00000483708 RIPK4P57078 832 aa16.59■□□□□ 0.25
COMMD2-205ENST00000483708 NLGN1Q8N2Q7 840 aa16.59■□□□□ 0.25
COMMD2-205ENST00000483708 CCDC146Q8IYE0 955 aa16.58■□□□□ 0.24
COMMD2-205ENST00000483708 MIS18AQ9NYP9 233 aa16.58■□□□□ 0.24
COMMD2-205ENST00000483708 HEG1Q9ULI3 1381 aa16.57■□□□□ 0.24
COMMD2-205ENST00000483708 SCN11AQ9UI33 1791 aa16.56■□□□□ 0.24
COMMD2-205ENST00000483708 ANP32CO43423 234 aa16.56■□□□□ 0.24
COMMD2-205ENST00000483708 GYS1P13807 737 aa16.56■□□□□ 0.24
COMMD2-205ENST00000483708 CANXP27824 592 aaKnown RBP16.56■□□□□ 0.24
COMMD2-205ENST00000483708 TMPOP42166 694 aaKnown RBP16.56■□□□□ 0.24
COMMD2-205ENST00000483708 PNISRQ8TF01 805 aaKnown RBP16.56■□□□□ 0.24
COMMD2-205ENST00000483708 RUNDC1Q96C34 613 aa16.56■□□□□ 0.24
COMMD2-205ENST00000483708 THUMPD2Q9BTF0 503 aaKnown RBP16.56■□□□□ 0.24
COMMD2-205ENST00000483708 ZBTB1Q9Y2K1 713 aa16.56■□□□□ 0.24
COMMD2-205ENST00000483708 KCPQ6ZWJ8 1503 aa16.55■□□□□ 0.24
COMMD2-205ENST00000483708 ZPR1O75312 459 aa16.55■□□□□ 0.24
COMMD2-205ENST00000483708 MMP10P09238 476 aa16.55■□□□□ 0.24
COMMD2-205ENST00000483708 NEUROD2Q15784 382 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms