RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 ONECUT3O60422 494 aaPredicted RBP19.47■□□□□ 0.71
PHGDH-205ENST00000482968 KAT6BQ8WYB5 2073 aa19.46■□□□□ 0.71
PHGDH-205ENST00000482968 ERVV-2B6SEH9 535 aa19.46■□□□□ 0.71
PHGDH-205ENST00000482968 BABAM1Q9NWV8 329 aa19.46■□□□□ 0.71
PHGDH-205ENST00000482968 RCAN3Q9UKA8 241 aa19.46■□□□□ 0.71
PHGDH-205ENST00000482968 ELL2O00472 640 aaPredicted RBP19.45■□□□□ 0.7
PHGDH-205ENST00000482968 ILDR1Q86SU0 546 aaPredicted RBP19.45■□□□□ 0.7
PHGDH-205ENST00000482968 SEPT12Q8IYM1 358 aa19.45■□□□□ 0.7
PHGDH-205ENST00000482968 SUPT16HQ9Y5B9 1047 aaKnown RBP19.44■□□□□ 0.7
PHGDH-205ENST00000482968 KCNQ3O43525 872 aa19.44■□□□□ 0.7
PHGDH-205ENST00000482968 RBM6P78332 1123 aaKnown RBP19.44■□□□□ 0.7
PHGDH-205ENST00000482968 KRT24Q2M2I5 525 aa19.44■□□□□ 0.7
PHGDH-205ENST00000482968 TSPYL6Q8N831 410 aa19.44■□□□□ 0.7
PHGDH-205ENST00000482968 C8orf58Q8NAV2 365 aa19.44■□□□□ 0.7
PHGDH-205ENST00000482968 RGS17Q9UGC6 210 aaPredicted RBP19.44■□□□□ 0.7
PHGDH-205ENST00000482968 THSD7AQ9UPZ6 1657 aa19.43■□□□□ 0.7
PHGDH-205ENST00000482968 SIPA1L3O60292 1781 aaPredicted RBP19.43■□□□□ 0.7
PHGDH-205ENST00000482968 SLC39A6Q13433 755 aa19.42■□□□□ 0.7
PHGDH-205ENST00000482968 TWISTNBQ3B726 338 aaPredicted RBP19.41■□□□□ 0.7
PHGDH-205ENST00000482968 SYTL4Q96C24 671 aaPredicted RBP19.41■□□□□ 0.7
PHGDH-205ENST00000482968 TMOD3Q9NYL9 352 aa19.41■□□□□ 0.7
PHGDH-205ENST00000482968 MRC1P22897 1456 aa19.4■□□□□ 0.7
PHGDH-205ENST00000482968 VAMP4O75379 141 aa19.4■□□□□ 0.7
PHGDH-205ENST00000482968 PRIM1P49642 420 aaKnown RBP19.4■□□□□ 0.7
PHGDH-205ENST00000482968 FAM182BQ5T319 152 aa19.4■□□□□ 0.7
PHGDH-205ENST00000482968 ACSBG1Q96GR2 724 aa19.4■□□□□ 0.7
PHGDH-205ENST00000482968 TOGARAM1Q9Y4F4 1720 aa19.4■□□□□ 0.7
PHGDH-205ENST00000482968 CT47B1P0C2W7 299 aaPredicted RBP19.39■□□□□ 0.7
PHGDH-205ENST00000482968 RXRBP28702 533 aa19.39■□□□□ 0.7
PHGDH-205ENST00000482968 EIF4A1P60842 406 aaKnown RBP19.39■□□□□ 0.7
PHGDH-205ENST00000482968 ZNF790Q6PG37 636 aa19.39■□□□□ 0.7
PHGDH-205ENST00000482968 PIGBQ92521 554 aa19.39■□□□□ 0.69
PHGDH-205ENST00000482968 KDM3BQ7LBC6 1761 aa19.39■□□□□ 0.69
PHGDH-205ENST00000482968 POTEAQ6S8J7 498 aa19.38■□□□□ 0.69
PHGDH-205ENST00000482968 ITGB4P16144 1822 aa19.38■□□□□ 0.69
PHGDH-205ENST00000482968 BCAR3O75815 825 aa19.37■□□□□ 0.69
PHGDH-205ENST00000482968 RARSP54136 660 aaKnown RBP19.37■□□□□ 0.69
PHGDH-205ENST00000482968 TTC5Q8N0Z6 440 aa19.37■□□□□ 0.69
PHGDH-205ENST00000482968 BCL2L13Q9BXK5 485 aa19.37■□□□□ 0.69
PHGDH-205ENST00000482968 DOT1LQ8TEK3 1739 aa19.35■□□□□ 0.69
PHGDH-205ENST00000482968 TCERG1O14776 1098 aaKnown RBP19.34■□□□□ 0.69
PHGDH-205ENST00000482968 KCNQ2O43526 872 aa19.34■□□□□ 0.69
PHGDH-205ENST00000482968 ASAP1Q9ULH1 1129 aa19.34■□□□□ 0.69
PHGDH-205ENST00000482968 BCL9O00512 1426 aa19.34■□□□□ 0.69
PHGDH-205ENST00000482968 KRT27Q7Z3Y8 459 aa19.34■□□□□ 0.69
PHGDH-205ENST00000482968 SSH1Q8WYL5 1049 aa19.34■□□□□ 0.69
PHGDH-205ENST00000482968 ZNF496Q96IT1 587 aaPredicted RBP19.34■□□□□ 0.69
PHGDH-205ENST00000482968 BRWD3Q6RI45 1802 aa19.33■□□□□ 0.69
PHGDH-205ENST00000482968 ZNF428Q96B54 188 aa19.33■□□□□ 0.68
PHGDH-205ENST00000482968 PTCD1O75127 700 aaKnown RBP19.32■□□□□ 0.68
PHGDH-205ENST00000482968 GIGYF1O75420 1035 aaPredicted RBP19.32■□□□□ 0.68
PHGDH-205ENST00000482968 NECTIN2Q92692 538 aa19.32■□□□□ 0.68
PHGDH-205ENST00000482968 FMNL2Q96PY5 1086 aa19.32■□□□□ 0.68
PHGDH-205ENST00000482968 ATG3Q9NT62 314 aa19.32■□□□□ 0.68
PHGDH-205ENST00000482968 SMC4Q9NTJ3 1288 aa19.32■□□□□ 0.68
PHGDH-205ENST00000482968 PLIN1O60240 522 aa19.32■□□□□ 0.68
PHGDH-205ENST00000482968 PRAMEF22A3QJZ6 481 aa19.31■□□□□ 0.68
PHGDH-205ENST00000482968 EIF2S2P20042 333 aaKnown RBP19.31■□□□□ 0.68
PHGDH-205ENST00000482968 ALDH1L2Q3SY69 923 aa19.31■□□□□ 0.68
PHGDH-205ENST00000482968 HEG1Q9ULI3 1381 aa19.3■□□□□ 0.68
PHGDH-205ENST00000482968 RRP1P56182 461 aaKnown RBP19.3■□□□□ 0.68
PHGDH-205ENST00000482968 RNF123Q5XPI4 1314 aa19.3■□□□□ 0.68
PHGDH-205ENST00000482968 FRAT1Q92837 279 aaPredicted RBP19.29■□□□□ 0.68
PHGDH-205ENST00000482968 SOS1Q07889 1333 aaPredicted RBP19.29■□□□□ 0.68
PHGDH-205ENST00000482968 HOXB7P09629 217 aa19.29■□□□□ 0.68
PHGDH-205ENST00000482968 SNRPA1P09661 255 aaKnown RBP19.29■□□□□ 0.68
PHGDH-205ENST00000482968 HDGFL1Q5TGJ6 251 aa19.29■□□□□ 0.68
PHGDH-205ENST00000482968 PTF1AQ7RTS3 328 aa19.29■□□□□ 0.68
PHGDH-205ENST00000482968 IRX6P78412 446 aaPredicted RBP19.28■□□□□ 0.68
PHGDH-205ENST00000482968 CCDC30Q5VVM6 783 aa19.28■□□□□ 0.68
PHGDH-205ENST00000482968 RBM42Q9BTD8 480 aaKnown RBP19.28■□□□□ 0.68
PHGDH-205ENST00000482968 PAPPAQ13219 1627 aa19.28■□□□□ 0.68
PHGDH-205ENST00000482968 FAM196AQ6ZSG2 479 aa19.27■□□□□ 0.68
PHGDH-205ENST00000482968 MRPL50Q8N5N7 158 aaKnown RBP19.27■□□□□ 0.68
PHGDH-205ENST00000482968 SLC4A2P04920 1241 aa19.27■□□□□ 0.67
PHGDH-205ENST00000482968 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.27■□□□□ 0.67
PHGDH-205ENST00000482968 USP16Q9Y5T5 823 aa19.27■□□□□ 0.67
PHGDH-205ENST00000482968 RGS12O14924 1447 aa19.26■□□□□ 0.67
PHGDH-205ENST00000482968 UBR2Q8IWV8 1755 aa19.26■□□□□ 0.67
PHGDH-205ENST00000482968 CANXP27824 592 aaKnown RBP19.26■□□□□ 0.67
PHGDH-205ENST00000482968 STK31Q9BXU1 1019 aa19.26■□□□□ 0.67
PHGDH-205ENST00000482968 NOB1Q9ULX3 412 aaKnown RBP19.26■□□□□ 0.67
PHGDH-205ENST00000482968 KCPQ6ZWJ8 1503 aa19.25■□□□□ 0.67
PHGDH-205ENST00000482968 SBF2Q86WG5 1849 aa19.25■□□□□ 0.67
PHGDH-205ENST00000482968 NEFLP07196 543 aa19.24■□□□□ 0.67
PHGDH-205ENST00000482968 CHMP4AQ9BY43 222 aa19.24■□□□□ 0.67
PHGDH-205ENST00000482968 BRPF1P55201 1214 aaPredicted RBP19.24■□□□□ 0.67
PHGDH-205ENST00000482968 C5P01031 1676 aa19.23■□□□□ 0.67
PHGDH-205ENST00000482968 SMARCC1Q92922 1105 aaPredicted RBP19.23■□□□□ 0.67
PHGDH-205ENST00000482968 CHPF2Q9P2E5 772 aa19.23■□□□□ 0.67
PHGDH-205ENST00000482968 KIF16BQ96L93 1317 aa19.22■□□□□ 0.67
PHGDH-205ENST00000482968 SLC4A9Q96Q91 983 aa19.22■□□□□ 0.67
PHGDH-205ENST00000482968 NHSQ6T4R5 1651 aa19.22■□□□□ 0.67
PHGDH-205ENST00000482968 TRIM37O94972 964 aa19.21■□□□□ 0.67
PHGDH-205ENST00000482968 FKBP8Q14318 412 aa19.21■□□□□ 0.67
PHGDH-205ENST00000482968 C20orf194Q5TEA3 1177 aa19.21■□□□□ 0.67
PHGDH-205ENST00000482968 ZKSCAN2Q63HK3 967 aa19.21■□□□□ 0.67
PHGDH-205ENST00000482968 VSIG10Q8N0Z9 540 aa19.21■□□□□ 0.67
PHGDH-205ENST00000482968 BCL11BQ9C0K0 894 aaPredicted RBP19.21■□□□□ 0.67
PHGDH-205ENST00000482968 PALLDQ8WX93 1383 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms