RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 RCAN3Q9UKA8 241 aa16.18■□□□□ 0.18
TSPAN1-208ENST00000482928 LAS1LQ9Y4W2 734 aaKnown RBP16.18■□□□□ 0.18
TSPAN1-208ENST00000482928 TATP17735 454 aaPredicted RBP16.17■□□□□ 0.18
TSPAN1-208ENST00000482928 MTHFSDQ2M296 383 aaKnown RBP16.17■□□□□ 0.18
TSPAN1-208ENST00000482928 SGIP1Q9BQI5 828 aa16.17■□□□□ 0.18
TSPAN1-208ENST00000482928 COL14A1Q05707 1796 aaKnown RBP16.17■□□□□ 0.18
TSPAN1-208ENST00000482928 GNAI1P63096 354 aa16.16■□□□□ 0.18
TSPAN1-208ENST00000482928 C1orf141Q5JVX7 400 aa16.16■□□□□ 0.18
TSPAN1-208ENST00000482928 KLHL34Q8N239 644 aa16.16■□□□□ 0.18
TSPAN1-208ENST00000482928 SPATA31A5Q5VU36 1347 aa16.16■□□□□ 0.18
TSPAN1-208ENST00000482928 SPATA31A7Q8IWB4 1347 aa16.16■□□□□ 0.18
TSPAN1-208ENST00000482928 WDR17Q8IZU2 1322 aa16.16■□□□□ 0.18
TSPAN1-208ENST00000482928 DLG5Q8TDM6 1919 aa16.15■□□□□ 0.18
TSPAN1-208ENST00000482928 LMO7Q8WWI1 1683 aa16.15■□□□□ 0.18
TSPAN1-208ENST00000482928 GNAT3A8MTJ3 354 aa16.15■□□□□ 0.18
TSPAN1-208ENST00000482928 HTATSF1O43719 755 aaKnown RBP16.15■□□□□ 0.18
TSPAN1-208ENST00000482928 BTG4Q9NY30 223 aa16.15■□□□□ 0.18
TSPAN1-208ENST00000482928 COL5A2P05997 1499 aaPredicted RBP16.15■□□□□ 0.18
TSPAN1-208ENST00000482928 ZNF530Q6P9A1 599 aaPredicted RBP16.14■□□□□ 0.17
TSPAN1-208ENST00000482928 TRMT2AQ8IZ69 625 aaKnown RBP16.14■□□□□ 0.17
TSPAN1-208ENST00000482928 BCL11BQ9C0K0 894 aaPredicted RBP16.14■□□□□ 0.17
TSPAN1-208ENST00000482928 IFT57Q9NWB7 429 aa16.14■□□□□ 0.17
TSPAN1-208ENST00000482928 ADCY9O60503 1353 aa16.13■□□□□ 0.17
TSPAN1-208ENST00000482928 NCAPD2Q15021 1401 aa16.13■□□□□ 0.17
TSPAN1-208ENST00000482928 THUMPD2Q9BTF0 503 aaKnown RBP16.13■□□□□ 0.17
TSPAN1-208ENST00000482928 SPINK5Q9NQ38 1064 aaPredicted RBP16.13■□□□□ 0.17
TSPAN1-208ENST00000482928 SPG7Q9UQ90 795 aa16.13■□□□□ 0.17
TSPAN1-208ENST00000482928 FANCIQ9NVI1 1328 aa16.13■□□□□ 0.17
TSPAN1-208ENST00000482928 GRIN3BO60391 1043 aa16.12■□□□□ 0.17
TSPAN1-208ENST00000482928 MCM10Q7L590 875 aa16.12■□□□□ 0.17
TSPAN1-208ENST00000482928 KIF3CO14782 793 aa16.11■□□□□ 0.17
TSPAN1-208ENST00000482928 DCTN1Q14203 1278 aa16.11■□□□□ 0.17
TSPAN1-208ENST00000482928 AKAP4Q5JQC9 854 aa16.11■□□□□ 0.17
TSPAN1-208ENST00000482928 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.11■□□□□ 0.17
TSPAN1-208ENST00000482928 TSR2Q969E8 191 aaKnown RBP16.11■□□□□ 0.17
TSPAN1-208ENST00000482928 PLEKHG2Q9H7P9 1386 aa16.11■□□□□ 0.17
TSPAN1-208ENST00000482928 FKBP8Q14318 412 aa16.1■□□□□ 0.17
TSPAN1-208ENST00000482928 CARD10Q9BWT7 1032 aa16.1■□□□□ 0.17
TSPAN1-208ENST00000482928 CRB1P82279 1406 aa16.1■□□□□ 0.17
TSPAN1-208ENST00000482928 CT47B1P0C2W7 299 aaPredicted RBP16.09■□□□□ 0.17
TSPAN1-208ENST00000482928 HTRA3P83110 453 aa16.09■□□□□ 0.17
TSPAN1-208ENST00000482928 LARP1Q6PKG0 1096 aaKnown RBP16.09■□□□□ 0.17
TSPAN1-208ENST00000482928 CFAP44Q96MT7 982 aa16.09■□□□□ 0.17
TSPAN1-208ENST00000482928 PARP4Q9UKK3 1724 aaKnown RBP16.08■□□□□ 0.17
TSPAN1-208ENST00000482928 HSPA1AP0DMV8 641 aaKnown RBP16.08■□□□□ 0.16
TSPAN1-208ENST00000482928 HSPA1BP0DMV9 641 aaKnown RBP16.08■□□□□ 0.16
TSPAN1-208ENST00000482928 CANXP27824 592 aaKnown RBP16.08■□□□□ 0.16
TSPAN1-208ENST00000482928 STK32BQ9NY57 414 aa16.08■□□□□ 0.16
TSPAN1-208ENST00000482928 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.08■□□□□ 0.16
TSPAN1-208ENST00000482928 PCNTO95613 3336 aa16.08■□□□□ 0.16
TSPAN1-208ENST00000482928 IL2RBP14784 551 aa16.07■□□□□ 0.16
TSPAN1-208ENST00000482928 RRP1P56182 461 aaKnown RBP16.07■□□□□ 0.16
TSPAN1-208ENST00000482928 EXOSC9Q06265 439 aaKnown RBP16.07■□□□□ 0.16
TSPAN1-208ENST00000482928 TEFQ10587 303 aa16.07■□□□□ 0.16
TSPAN1-208ENST00000482928 USP35Q9P2H5 1018 aa16.07■□□□□ 0.16
TSPAN1-208ENST00000482928 SBF2Q86WG5 1849 aa16.06■□□□□ 0.16
TSPAN1-208ENST00000482928 MEGF6O75095 1541 aa16.06■□□□□ 0.16
TSPAN1-208ENST00000482928 HSP90AB1P08238 724 aaKnown RBP16.06■□□□□ 0.16
TSPAN1-208ENST00000482928 YBX3P16989 372 aaKnown RBP eCLIP16.06■□□□□ 0.16
TSPAN1-208ENST00000482928 TSPYL4Q9UJ04 414 aa16.06■□□□□ 0.16
TSPAN1-208ENST00000482928 IRX6P78412 446 aaPredicted RBP16.05■□□□□ 0.16
TSPAN1-208ENST00000482928 IFNL2Q8IZJ0 200 aa16.05■□□□□ 0.16
TSPAN1-208ENST00000482928 MBIPQ9NS73 344 aa16.05■□□□□ 0.16
TSPAN1-208ENST00000482928 OVOS2A0A0G2JMS6 1433 aa16.04■□□□□ 0.16
TSPAN1-208ENST00000482928 ZNF853P0CG23 659 aa16.04■□□□□ 0.16
TSPAN1-208ENST00000482928 PCDH11XQ9BZA7 1347 aa16.03■□□□□ 0.16
TSPAN1-208ENST00000482928 PCDH11YQ9BZA8 1340 aa16.03■□□□□ 0.16
TSPAN1-208ENST00000482928 PLSCR1O15162 318 aa16.03■□□□□ 0.16
TSPAN1-208ENST00000482928 TAF7Q15545 349 aaPredicted RBP16.03■□□□□ 0.16
TSPAN1-208ENST00000482928 MPRIPQ6WCQ1 1025 aa16.03■□□□□ 0.16
TSPAN1-208ENST00000482928 ZCRB1Q8TBF4 217 aaKnown RBP16.03■□□□□ 0.16
TSPAN1-208ENST00000482928 LRRC37A3O60309 1634 aa16.03■□□□□ 0.16
TSPAN1-208ENST00000482928 RNF123Q5XPI4 1314 aa16.02■□□□□ 0.16
TSPAN1-208ENST00000482928 CHL1O00533 1208 aa16.02■□□□□ 0.16
TSPAN1-208ENST00000482928 RNMTO43148 476 aaKnown RBP16.02■□□□□ 0.16
TSPAN1-208ENST00000482928 TOMM70O94826 608 aa16.02■□□□□ 0.16
TSPAN1-208ENST00000482928 IL17REQ8NFR9 667 aa16.02■□□□□ 0.16
TSPAN1-208ENST00000482928 ZNF428Q96B54 188 aa16.02■□□□□ 0.16
TSPAN1-208ENST00000482928 BABAM1Q9NWV8 329 aa16.02■□□□□ 0.16
TSPAN1-208ENST00000482928 PKD1L3Q7Z443 1732 aa16.02■□□□□ 0.15
TSPAN1-208ENST00000482928 SPATA31A1Q5TZJ5 1347 aa16.01■□□□□ 0.15
TSPAN1-208ENST00000482928 PHKG2P15735 406 aa16.01■□□□□ 0.15
TSPAN1-208ENST00000482928 SLC15A2Q16348 729 aa16.01■□□□□ 0.15
TSPAN1-208ENST00000482928 NLGN2Q8NFZ4 835 aa16.01■□□□□ 0.15
TSPAN1-208ENST00000482928 SMC4Q9NTJ3 1288 aa16.01■□□□□ 0.15
TSPAN1-208ENST00000482928 RARSP54136 660 aaKnown RBP16■□□□□ 0.15
TSPAN1-208ENST00000482928 TWISTNBQ3B726 338 aaPredicted RBP16■□□□□ 0.15
TSPAN1-208ENST00000482928 ERICH6BQ5W0A0 696 aa16■□□□□ 0.15
TSPAN1-208ENST00000482928 CDCA7Q9BWT1 371 aaPredicted RBP16■□□□□ 0.15
TSPAN1-208ENST00000482928 MLLT1Q03111 559 aaPredicted RBP15.99■□□□□ 0.15
TSPAN1-208ENST00000482928 FRAT1Q92837 279 aaPredicted RBP15.99■□□□□ 0.15
TSPAN1-208ENST00000482928 DCAF5Q96JK2 942 aa15.99■□□□□ 0.15
TSPAN1-208ENST00000482928 LGR6Q9HBX8 967 aa15.99■□□□□ 0.15
TSPAN1-208ENST00000482928 MIS18AQ9NYP9 233 aa15.99■□□□□ 0.15
TSPAN1-208ENST00000482928 THRAP3Q9Y2W1 955 aaKnown RBP15.99■□□□□ 0.15
TSPAN1-208ENST00000482928 CEMIPQ8WUJ3 1361 aa15.99■□□□□ 0.15
TSPAN1-208ENST00000482928 BTBD11A6QL63 1104 aa15.98■□□□□ 0.15
TSPAN1-208ENST00000482928 ELL2O00472 640 aaPredicted RBP15.98■□□□□ 0.15
TSPAN1-208ENST00000482928 BCAR3O75815 825 aa15.98■□□□□ 0.15
TSPAN1-208ENST00000482928 DDX54Q8TDD1 881 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms