RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 RNMTO43148 476 aaKnown RBP20.19■□□□□ 0.82
COL16A1-213ENST00000482910 PRKAR2BP31323 418 aa20.19■□□□□ 0.82
COL16A1-213ENST00000482910 MYBBP1AQ9BQG0 1328 aaKnown RBP20.19■□□□□ 0.82
COL16A1-213ENST00000482910 MAP3K5Q99683 1374 aa20.18■□□□□ 0.82
COL16A1-213ENST00000482910 C4BP0C0L5 1744 aa20.17■□□□□ 0.82
COL16A1-213ENST00000482910 NFATC2IPQ8NCF5 419 aa20.17■□□□□ 0.82
COL16A1-213ENST00000482910 SLC16A10Q8TF71 515 aa20.17■□□□□ 0.82
COL16A1-213ENST00000482910 PDGFDQ9GZP0 370 aaPredicted RBP20.17■□□□□ 0.82
COL16A1-213ENST00000482910 SLC52A2Q9HAB3 445 aa20.17■□□□□ 0.82
COL16A1-213ENST00000482910 TFCP2L1Q9NZI6 479 aa20.17■□□□□ 0.82
COL16A1-213ENST00000482910 MTFR1LQ9H019 292 aa20.16■□□□□ 0.82
COL16A1-213ENST00000482910 LGR6Q9HBX8 967 aa20.16■□□□□ 0.82
COL16A1-213ENST00000482910 PNPLA7Q6ZV29 1317 aa20.16■□□□□ 0.82
COL16A1-213ENST00000482910 ZNF316A6NFI3 1004 aaPredicted RBP20.15■□□□□ 0.82
COL16A1-213ENST00000482910 GNAT3A8MTJ3 354 aa20.15■□□□□ 0.82
COL16A1-213ENST00000482910 PHACTR3Q96KR7 559 aa20.15■□□□□ 0.82
COL16A1-213ENST00000482910 CICQ96RK0 1608 aaPredicted RBP20.14■□□□□ 0.81
COL16A1-213ENST00000482910 PRKRIP1Q9H875 184 aaPredicted RBP20.14■□□□□ 0.81
COL16A1-213ENST00000482910 ATP6V1AP38606 617 aa20.13■□□□□ 0.81
COL16A1-213ENST00000482910 FLAD1Q8NFF5 587 aa20.13■□□□□ 0.81
COL16A1-213ENST00000482910 PNNQ9H307 717 aaKnown RBP20.13■□□□□ 0.81
COL16A1-213ENST00000482910 COL24A1Q17RW2 1714 aa20.13■□□□□ 0.81
COL16A1-213ENST00000482910 CEMIPQ8WUJ3 1361 aa20.12■□□□□ 0.81
COL16A1-213ENST00000482910 UBR3Q6ZT12 1888 aa20.12■□□□□ 0.81
COL16A1-213ENST00000482910 ZBTB7AO95365 584 aa20.12■□□□□ 0.81
COL16A1-213ENST00000482910 ITPK1Q13572 414 aa20.12■□□□□ 0.81
COL16A1-213ENST00000482910 COL5A3P25940 1745 aaPredicted RBP20.11■□□□□ 0.81
COL16A1-213ENST00000482910 LINC00116Q8NCU8 138 aa20.11■□□□□ 0.81
COL16A1-213ENST00000482910 IL17REQ8NFR9 667 aa20.11■□□□□ 0.81
COL16A1-213ENST00000482910 AK7Q96M32 723 aa20.11■□□□□ 0.81
COL16A1-213ENST00000482910 SLC4A9Q96Q91 983 aa20.11■□□□□ 0.81
COL16A1-213ENST00000482910 SIPA1L3O60292 1781 aaPredicted RBP20.11■□□□□ 0.81
COL16A1-213ENST00000482910 NEFMP07197 916 aa20.1■□□□□ 0.81
COL16A1-213ENST00000482910 PTGER2P43116 358 aa20.1■□□□□ 0.81
COL16A1-213ENST00000482910 SGIP1Q9BQI5 828 aa20.1■□□□□ 0.81
COL16A1-213ENST00000482910 RBM42Q9BTD8 480 aaKnown RBP20.1■□□□□ 0.81
COL16A1-213ENST00000482910 HTATSF1O43719 755 aaKnown RBP20.09■□□□□ 0.81
COL16A1-213ENST00000482910 RC3H1Q5TC82 1133 aaKnown RBP20.09■□□□□ 0.81
COL16A1-213ENST00000482910 PLEKHF1Q96S99 279 aa20.09■□□□□ 0.81
COL16A1-213ENST00000482910 SSFA2P28290 1259 aa20.08■□□□□ 0.81
COL16A1-213ENST00000482910 TEFQ10587 303 aa20.08■□□□□ 0.81
COL16A1-213ENST00000482910 COL23A1Q86Y22 540 aaPredicted RBP20.08■□□□□ 0.81
COL16A1-213ENST00000482910 ATF5Q9Y2D1 282 aaPredicted RBP20.08■□□□□ 0.81
COL16A1-213ENST00000482910 UBR2Q8IWV8 1755 aa20.08■□□□□ 0.8
COL16A1-213ENST00000482910 CNTNAP4Q9C0A0 1308 aa20.07■□□□□ 0.8
COL16A1-213ENST00000482910 PTCD1O75127 700 aaKnown RBP20.07■□□□□ 0.8
COL16A1-213ENST00000482910 PPP1R1BQ9UD71 204 aaPredicted RBP20.07■□□□□ 0.8
COL16A1-213ENST00000482910 TJP1Q07157 1748 aa20.07■□□□□ 0.8
COL16A1-213ENST00000482910 KCPQ6ZWJ8 1503 aa20.07■□□□□ 0.8
COL16A1-213ENST00000482910 RTF1Q92541 710 aaKnown RBP20.06■□□□□ 0.8
COL16A1-213ENST00000482910 VSIG10Q8N0Z9 540 aa20.05■□□□□ 0.8
COL16A1-213ENST00000482910 DLG5Q8TDM6 1919 aa20.05■□□□□ 0.8
COL16A1-213ENST00000482910 MYH14Q7Z406 1995 aaKnown RBP20.04■□□□□ 0.8
COL16A1-213ENST00000482910 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.04■□□□□ 0.8
COL16A1-213ENST00000482910 GNPATO15228 680 aa20.04■□□□□ 0.8
COL16A1-213ENST00000482910 SLC39A6Q13433 755 aa20.04■□□□□ 0.8
COL16A1-213ENST00000482910 MAPK8IP3Q9UPT6 1336 aa20.03■□□□□ 0.8
COL16A1-213ENST00000482910 ADRA2BP18089 450 aa20.03■□□□□ 0.8
COL16A1-213ENST00000482910 AMIGO3Q86WK7 504 aa20.03■□□□□ 0.8
COL16A1-213ENST00000482910 MSH5O43196 834 aa20.02■□□□□ 0.8
COL16A1-213ENST00000482910 NFE2L2Q16236 605 aa20.02■□□□□ 0.8
COL16A1-213ENST00000482910 ZNF790Q6PG37 636 aa20.02■□□□□ 0.8
COL16A1-213ENST00000482910 TTC5Q8N0Z6 440 aa20.02■□□□□ 0.8
COL16A1-213ENST00000482910 RTCBQ9Y3I0 505 aaKnown RBP20.02■□□□□ 0.8
COL16A1-213ENST00000482910 RPS6KA4O75676 772 aa20.01■□□□□ 0.79
COL16A1-213ENST00000482910 POLD1P28340 1107 aa20.01■□□□□ 0.79
COL16A1-213ENST00000482910 ARXQ96QS3 562 aa20.01■□□□□ 0.79
COL16A1-213ENST00000482910 CRKLP46109 303 aaKnown RBP20■□□□□ 0.79
COL16A1-213ENST00000482910 WDR43Q15061 677 aaKnown RBP eCLIP20■□□□□ 0.79
COL16A1-213ENST00000482910 MCM10Q7L590 875 aa20■□□□□ 0.79
COL16A1-213ENST00000482910 PHF14O94880 888 aa19.99■□□□□ 0.79
COL16A1-213ENST00000482910 DNAJC10Q8IXB1 793 aa19.99■□□□□ 0.79
COL16A1-213ENST00000482910 BTBD11A6QL63 1104 aa19.98■□□□□ 0.79
COL16A1-213ENST00000482910 TRAPPC3LQ5T215 181 aa19.98■□□□□ 0.79
COL16A1-213ENST00000482910 HEG1Q9ULI3 1381 aa19.97■□□□□ 0.79
COL16A1-213ENST00000482910 CYP19A1P11511 503 aaPredicted RBP19.97■□□□□ 0.79
COL16A1-213ENST00000482910 ZNF496Q96IT1 587 aaPredicted RBP19.97■□□□□ 0.79
COL16A1-213ENST00000482910 FMNL2Q96PY5 1086 aa19.97■□□□□ 0.79
COL16A1-213ENST00000482910 TEX13AQ9BXU3 409 aaPredicted RBP19.97■□□□□ 0.79
COL16A1-213ENST00000482910 DCTN1Q14203 1278 aa19.96■□□□□ 0.79
COL16A1-213ENST00000482910 TAF7Q15545 349 aaPredicted RBP19.96■□□□□ 0.79
COL16A1-213ENST00000482910 INTS5Q6P9B9 1019 aaKnown RBP19.96■□□□□ 0.79
COL16A1-213ENST00000482910 CCDC87Q9NVE4 849 aa19.96■□□□□ 0.79
COL16A1-213ENST00000482910 SMIM5Q71RC9 77 aa19.95■□□□□ 0.78
COL16A1-213ENST00000482910 ARHGEF1Q92888 912 aaKnown RBP19.95■□□□□ 0.78
COL16A1-213ENST00000482910 RUNDC1Q96C34 613 aa19.95■□□□□ 0.78
COL16A1-213ENST00000482910 C4AP0C0L4 1744 aa19.95■□□□□ 0.78
COL16A1-213ENST00000482910 ANP32CO43423 234 aa19.94■□□□□ 0.78
COL16A1-213ENST00000482910 STARD3NLO95772 234 aa19.94■□□□□ 0.78
COL16A1-213ENST00000482910 TMPOP42166 694 aaKnown RBP19.94■□□□□ 0.78
COL16A1-213ENST00000482910 LMOD3Q0VAK6 560 aa19.94■□□□□ 0.78
COL16A1-213ENST00000482910 PNISRQ8TF01 805 aaKnown RBP19.94■□□□□ 0.78
COL16A1-213ENST00000482910 SYT17Q9BSW7 474 aa19.94■□□□□ 0.78
COL16A1-213ENST00000482910 FHDC1Q9C0D6 1143 aaPredicted RBP19.94■□□□□ 0.78
COL16A1-213ENST00000482910 ADAMTS8Q9UP79 889 aa19.94■□□□□ 0.78
COL16A1-213ENST00000482910 MSL1Q68DK7 614 aa19.93■□□□□ 0.78
COL16A1-213ENST00000482910 SOS1Q07889 1333 aaPredicted RBP19.93■□□□□ 0.78
COL16A1-213ENST00000482910 RFC4P35249 363 aa19.92■□□□□ 0.78
COL16A1-213ENST00000482910 RIPK4P57078 832 aa19.92■□□□□ 0.78
COL16A1-213ENST00000482910 KDM3BQ7LBC6 1761 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms