RNA–Protein interactions for RNA: ENST00000482747.1

NELFCD-208, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 1,701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-208ENST00000482747 SLC4A9Q96Q91 983 aa22.71■■□□□ 1.23
NELFCD-208ENST00000482747 PNPLA7Q6ZV29 1317 aa22.7■■□□□ 1.22
NELFCD-208ENST00000482747 PTCD1O75127 700 aaKnown RBP22.7■■□□□ 1.22
NELFCD-208ENST00000482747 ATP6V1AP38606 617 aa22.7■■□□□ 1.22
NELFCD-208ENST00000482747 LRP5O75197 1615 aa22.7■■□□□ 1.22
NELFCD-208ENST00000482747 C5P01031 1676 aa22.7■■□□□ 1.22
NELFCD-208ENST00000482747 AMIGO3Q86WK7 504 aa22.69■■□□□ 1.22
NELFCD-208ENST00000482747 LINC00116Q8NCU8 138 aa22.69■■□□□ 1.22
NELFCD-208ENST00000482747 SLC52A2Q9HAB3 445 aa22.69■■□□□ 1.22
NELFCD-208ENST00000482747 SPON1Q9HCB6 807 aa22.69■■□□□ 1.22
NELFCD-208ENST00000482747 TUBGCP6Q96RT7 1819 aa22.69■■□□□ 1.22
NELFCD-208ENST00000482747 TAF1LQ8IZX4 1826 aa22.68■■□□□ 1.22
NELFCD-208ENST00000482747 FCHSD2O94868 740 aa22.68■■□□□ 1.22
NELFCD-208ENST00000482747 MYBBP1AQ9BQG0 1328 aaKnown RBP22.68■■□□□ 1.22
NELFCD-208ENST00000482747 SLC39A6Q13433 755 aa22.68■■□□□ 1.22
NELFCD-208ENST00000482747 IL17REQ8NFR9 667 aa22.68■■□□□ 1.22
NELFCD-208ENST00000482747 GAS2L2Q8NHY3 880 aa22.68■■□□□ 1.22
NELFCD-208ENST00000482747 PRKRIP1Q9H875 184 aaPredicted RBP22.68■■□□□ 1.22
NELFCD-208ENST00000482747 VIRMAQ69YN4 1812 aaKnown RBP22.67■■□□□ 1.22
NELFCD-208ENST00000482747 GNAT3A8MTJ3 354 aa22.67■■□□□ 1.22
NELFCD-208ENST00000482747 MAP3K5Q99683 1374 aa22.67■■□□□ 1.22
NELFCD-208ENST00000482747 MSH5O43196 834 aa22.66■■□□□ 1.22
NELFCD-208ENST00000482747 PHF14O94880 888 aa22.65■■□□□ 1.22
NELFCD-208ENST00000482747 COL23A1Q86Y22 540 aaPredicted RBP22.65■■□□□ 1.22
NELFCD-208ENST00000482747 C4BP0C0L5 1744 aa22.64■■□□□ 1.21
NELFCD-208ENST00000482747 PTGER2P43116 358 aa22.63■■□□□ 1.21
NELFCD-208ENST00000482747 DCTN1Q14203 1278 aa22.63■■□□□ 1.21
NELFCD-208ENST00000482747 AK7Q96M32 723 aa22.63■■□□□ 1.21
NELFCD-208ENST00000482747 MCM10Q7L590 875 aa22.62■■□□□ 1.21
NELFCD-208ENST00000482747 MTFR1LQ9H019 292 aa22.62■■□□□ 1.21
NELFCD-208ENST00000482747 PPP1R1BQ9UD71 204 aaPredicted RBP22.62■■□□□ 1.21
NELFCD-208ENST00000482747 PLEKHF1Q96S99 279 aa22.62■■□□□ 1.21
NELFCD-208ENST00000482747 ADAMTS7Q9UKP4 1686 aa22.62■■□□□ 1.21
NELFCD-208ENST00000482747 MRC1P22897 1456 aa22.61■■□□□ 1.21
NELFCD-208ENST00000482747 TEFQ10587 303 aa22.6■■□□□ 1.21
NELFCD-208ENST00000482747 GNPATO15228 680 aa22.6■■□□□ 1.21
NELFCD-208ENST00000482747 MSL1Q68DK7 614 aa22.6■■□□□ 1.21
NELFCD-208ENST00000482747 QSER1Q2KHR3 1735 aa22.58■■□□□ 1.21
NELFCD-208ENST00000482747 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.58■■□□□ 1.21
NELFCD-208ENST00000482747 SGIP1Q9BQI5 828 aa22.58■■□□□ 1.21
NELFCD-208ENST00000482747 CCDC146Q8IYE0 955 aa22.57■■□□□ 1.2
NELFCD-208ENST00000482747 CEMIPQ8WUJ3 1361 aa22.56■■□□□ 1.2
NELFCD-208ENST00000482747 UBR3Q6ZT12 1888 aa22.56■■□□□ 1.2
NELFCD-208ENST00000482747 DNAJC10Q8IXB1 793 aa22.56■■□□□ 1.2
NELFCD-208ENST00000482747 RTF1Q92541 710 aaKnown RBP22.56■■□□□ 1.2
NELFCD-208ENST00000482747 KCNQ3O43525 872 aa22.55■■□□□ 1.2
NELFCD-208ENST00000482747 NEFMP07197 916 aa22.55■■□□□ 1.2
NELFCD-208ENST00000482747 CCDC184Q52MB2 194 aa22.55■■□□□ 1.2
NELFCD-208ENST00000482747 SLC16A10Q8TF71 515 aa22.54■■□□□ 1.2
NELFCD-208ENST00000482747 KCPQ6ZWJ8 1503 aa22.54■■□□□ 1.2
NELFCD-208ENST00000482747 THUMPD2Q9BTF0 503 aaKnown RBP22.54■■□□□ 1.2
NELFCD-208ENST00000482747 MAPK8IP3Q9UPT6 1336 aa22.53■■□□□ 1.2
NELFCD-208ENST00000482747 MYH14Q7Z406 1995 aaKnown RBP22.53■■□□□ 1.2
NELFCD-208ENST00000482747 COL5A3P25940 1745 aaPredicted RBP22.53■■□□□ 1.2
NELFCD-208ENST00000482747 CRKLP46109 303 aaKnown RBP22.53■■□□□ 1.2
NELFCD-208ENST00000482747 ZNF790Q6PG37 636 aa22.53■■□□□ 1.2
NELFCD-208ENST00000482747 TTC5Q8N0Z6 440 aa22.53■■□□□ 1.2
NELFCD-208ENST00000482747 ADAMTS8Q9UP79 889 aa22.53■■□□□ 1.2
NELFCD-208ENST00000482747 TJP1Q07157 1748 aa22.52■■□□□ 1.2
NELFCD-208ENST00000482747 BTBD11A6QL63 1104 aa22.52■■□□□ 1.2
NELFCD-208ENST00000482747 WDR43Q15061 677 aaKnown RBP eCLIP22.52■■□□□ 1.2
NELFCD-208ENST00000482747 ZNF496Q96IT1 587 aaPredicted RBP22.52■■□□□ 1.2
NELFCD-208ENST00000482747 DLG5Q8TDM6 1919 aa22.52■■□□□ 1.2
NELFCD-208ENST00000482747 SIPA1L3O60292 1781 aaPredicted RBP22.52■■□□□ 1.2
NELFCD-208ENST00000482747 SSFA2P28290 1259 aa22.51■■□□□ 1.19
NELFCD-208ENST00000482747 NFE2L2Q16236 605 aa22.51■■□□□ 1.19
NELFCD-208ENST00000482747 FLAD1Q8NFF5 587 aa22.51■■□□□ 1.19
NELFCD-208ENST00000482747 ARXQ96QS3 562 aa22.51■■□□□ 1.19
NELFCD-208ENST00000482747 MIS18AQ9NYP9 233 aa22.51■■□□□ 1.19
NELFCD-208ENST00000482747 RRP7AQ9Y3A4 280 aaKnown RBP22.51■■□□□ 1.19
NELFCD-208ENST00000482747 ZNF831Q5JPB2 1677 aa22.51■■□□□ 1.19
NELFCD-208ENST00000482747 RTCBQ9Y3I0 505 aaKnown RBP22.51■■□□□ 1.19
NELFCD-208ENST00000482747 HMGB2P26583 209 aaKnown RBP22.5■■□□□ 1.19
NELFCD-208ENST00000482747 KLHL34Q8N239 644 aa22.5■■□□□ 1.19
NELFCD-208ENST00000482747 FHDC1Q9C0D6 1143 aaPredicted RBP22.5■■□□□ 1.19
NELFCD-208ENST00000482747 CNTNAP4Q9C0A0 1308 aa22.5■■□□□ 1.19
NELFCD-208ENST00000482747 NEUROD2Q15784 382 aa22.49■■□□□ 1.19
NELFCD-208ENST00000482747 RC3H1Q5TC82 1133 aaKnown RBP22.49■■□□□ 1.19
NELFCD-208ENST00000482747 INTS5Q6P9B9 1019 aaKnown RBP22.49■■□□□ 1.19
NELFCD-208ENST00000482747 PNNQ9H307 717 aaKnown RBP22.49■■□□□ 1.19
NELFCD-208ENST00000482747 ARHGEF1Q92888 912 aaKnown RBP22.48■■□□□ 1.19
NELFCD-208ENST00000482747 HTATSF1O43719 755 aaKnown RBP22.48■■□□□ 1.19
NELFCD-208ENST00000482747 RPS6KA4O75676 772 aa22.48■■□□□ 1.19
NELFCD-208ENST00000482747 CYP19A1P11511 503 aaPredicted RBP22.48■■□□□ 1.19
NELFCD-208ENST00000482747 POLD1P28340 1107 aa22.48■■□□□ 1.19
NELFCD-208ENST00000482747 TRAPPC3LQ5T215 181 aa22.48■■□□□ 1.19
NELFCD-208ENST00000482747 UBR2Q8IWV8 1755 aa22.47■■□□□ 1.19
NELFCD-208ENST00000482747 RIPK4P57078 832 aa22.47■■□□□ 1.19
NELFCD-208ENST00000482747 GOLGB1Q14789 3259 aaKnown RBP22.46■■□□□ 1.19
NELFCD-208ENST00000482747 UTRNP46939 3433 aa22.46■■□□□ 1.19
NELFCD-208ENST00000482747 PRAMEF22A3QJZ6 481 aa22.45■■□□□ 1.19
NELFCD-208ENST00000482747 ANP32CO43423 234 aa22.45■■□□□ 1.19
NELFCD-208ENST00000482747 TMPOP42166 694 aaKnown RBP22.45■■□□□ 1.19
NELFCD-208ENST00000482747 SYT17Q9BSW7 474 aa22.45■■□□□ 1.19
NELFCD-208ENST00000482747 CCDC87Q9NVE4 849 aa22.45■■□□□ 1.18
NELFCD-208ENST00000482747 ZBTB1Q9Y2K1 713 aa22.45■■□□□ 1.18
NELFCD-208ENST00000482747 HEG1Q9ULI3 1381 aa22.45■■□□□ 1.18
NELFCD-208ENST00000482747 SENP3-EIF4A1A0A087X0R7 540 aa22.44■■□□□ 1.18
NELFCD-208ENST00000482747 TAF7Q15545 349 aaPredicted RBP22.44■■□□□ 1.18
NELFCD-208ENST00000482747 SRP68Q9UHB9 627 aaKnown RBP22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms