RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 FOXR1Q6PIV2 292 aa7.76□□□□□ -1.17
GTF3A-207ENST00000482655 GLMNQ92990 594 aa7.76□□□□□ -1.17
GTF3A-207ENST00000482655 GMCL1Q96IK5 515 aa7.76□□□□□ -1.17
GTF3A-207ENST00000482655 COL25A1Q9BXS0 654 aaPredicted RBP7.76□□□□□ -1.17
GTF3A-207ENST00000482655 FHDC1Q9C0D6 1143 aaPredicted RBP7.76□□□□□ -1.17
GTF3A-207ENST00000482655 HRH3Q9Y5N1 445 aa7.76□□□□□ -1.17
GTF3A-207ENST00000482655 TRIM50Q86XT4 487 aa7.75□□□□□ -1.17
GTF3A-207ENST00000482655 TRIM22Q8IYM9 498 aa7.75□□□□□ -1.17
GTF3A-207ENST00000482655 FNBP4Q8N3X1 1017 aaPredicted RBP7.75□□□□□ -1.17
GTF3A-207ENST00000482655 GPR161Q8N6U8 529 aaKnown RBP7.75□□□□□ -1.17
GTF3A-207ENST00000482655 A0A1B0GTH6 734 aa7.74□□□□□ -1.17
GTF3A-207ENST00000482655 USP17L3A6NCW0 530 aa7.74□□□□□ -1.17
GTF3A-207ENST00000482655 USP17L4A6NCW7 530 aa7.74□□□□□ -1.17
GTF3A-207ENST00000482655 ATP9BO43861 1147 aa7.74□□□□□ -1.17
GTF3A-207ENST00000482655 F11P03951 625 aa7.74□□□□□ -1.17
GTF3A-207ENST00000482655 USP17L2Q6R6M4 530 aa7.74□□□□□ -1.17
GTF3A-207ENST00000482655 USP17L1Q7RTZ2 530 aa7.74□□□□□ -1.17
GTF3A-207ENST00000482655 RHBDD1Q8TEB9 315 aa7.74□□□□□ -1.17
GTF3A-207ENST00000482655 CNTNAP3BQ96NU0 1288 aa7.74□□□□□ -1.17
GTF3A-207ENST00000482655 UCN2Q96RP3 112 aa7.74□□□□□ -1.17
GTF3A-207ENST00000482655 CNTNAP3Q9BZ76 1288 aa7.74□□□□□ -1.17
GTF3A-207ENST00000482655 CUEDC1Q9NWM3 386 aaPredicted RBP7.74□□□□□ -1.17
GTF3A-207ENST00000482655 SERTAD1Q9UHV2 236 aa7.74□□□□□ -1.17
GTF3A-207ENST00000482655 ATP1A2P50993 1020 aa7.73□□□□□ -1.17
GTF3A-207ENST00000482655 SMTNP53814 917 aa7.73□□□□□ -1.17
GTF3A-207ENST00000482655 C4orf17Q53FE4 359 aa7.73□□□□□ -1.17
GTF3A-207ENST00000482655 TBC1D9Q6ZT07 1266 aa7.73□□□□□ -1.17
GTF3A-207ENST00000482655 PPARGC1BQ86YN6 1023 aaKnown RBP7.73□□□□□ -1.17
GTF3A-207ENST00000482655 PLEKHM2Q8IWE5 1019 aa7.73□□□□□ -1.17
GTF3A-207ENST00000482655 ZNF837Q96EG3 531 aaPredicted RBP7.73□□□□□ -1.17
GTF3A-207ENST00000482655 CALR3Q96L12 384 aaKnown RBP7.73□□□□□ -1.17
GTF3A-207ENST00000482655 GPAMQ9HCL2 828 aa7.73□□□□□ -1.17
GTF3A-207ENST00000482655 PCDHGA11Q9Y5H2 935 aa7.73□□□□□ -1.17
GTF3A-207ENST00000482655 BACH1O14867 736 aa7.72□□□□□ -1.17
GTF3A-207ENST00000482655 CSB-PGBD3P0DP91 1061 aa7.72□□□□□ -1.17
GTF3A-207ENST00000482655 PGBD3Q8N328 593 aa7.72□□□□□ -1.17
GTF3A-207ENST00000482655 TRERF1Q96PN7 1200 aa7.72□□□□□ -1.17
GTF3A-207ENST00000482655 TMEM229AB2RXF0 380 aa7.71□□□□□ -1.18
GTF3A-207ENST00000482655 PLA2G4AP47712 749 aa7.71□□□□□ -1.18
GTF3A-207ENST00000482655 KRT76Q01546 638 aa7.71□□□□□ -1.18
GTF3A-207ENST00000482655 DBN1Q16643 649 aa7.71□□□□□ -1.18
GTF3A-207ENST00000482655 RNFT1Q5M7Z0 435 aa7.71□□□□□ -1.18
GTF3A-207ENST00000482655 GTPBP3Q969Y2 492 aaKnown RBP7.71□□□□□ -1.18
GTF3A-207ENST00000482655 NIFKQ9BYG3 293 aaKnown RBP7.71□□□□□ -1.18
GTF3A-207ENST00000482655 NUCKS1Q9H1E3 243 aaKnown RBP7.71□□□□□ -1.18
GTF3A-207ENST00000482655 A6NJY4 79 aa7.7□□□□□ -1.18
GTF3A-207ENST00000482655 SLC4A9Q96Q91 983 aa7.7□□□□□ -1.18
GTF3A-207ENST00000482655 RBM19Q9Y4C8 960 aaKnown RBP7.7□□□□□ -1.18
GTF3A-207ENST00000482655 GPR25O00155 361 aa7.69□□□□□ -1.18
GTF3A-207ENST00000482655 TPCN2Q8NHX9 752 aa7.69□□□□□ -1.18
GTF3A-207ENST00000482655 ZNF358Q9NW07 568 aa7.69□□□□□ -1.18
GTF3A-207ENST00000482655 TFIP11Q9UBB9 837 aaKnown RBP7.69□□□□□ -1.18
GTF3A-207ENST00000482655 MSX1P28360 303 aa7.68□□□□□ -1.18
GTF3A-207ENST00000482655 NBPF1Q3BBV0 1214 aa7.68□□□□□ -1.18
GTF3A-207ENST00000482655 EFHC2Q5JST6 749 aa7.68□□□□□ -1.18
GTF3A-207ENST00000482655 OGFOD1Q8N543 542 aa7.68□□□□□ -1.18
GTF3A-207ENST00000482655 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.68□□□□□ -1.18
GTF3A-207ENST00000482655 AIDAQ96BJ3 306 aa7.68□□□□□ -1.18
GTF3A-207ENST00000482655 DNAAF2Q9NVR5 837 aaKnown RBP7.68□□□□□ -1.18
GTF3A-207ENST00000482655 MKRN1Q9UHC7 482 aaKnown RBP7.68□□□□□ -1.18
GTF3A-207ENST00000482655 CDK2AP1O14519 115 aa7.67□□□□□ -1.18
GTF3A-207ENST00000482655 LORP23490 312 aaPredicted RBP7.67□□□□□ -1.18
GTF3A-207ENST00000482655 LBRQ14739 615 aaKnown RBP7.67□□□□□ -1.18
GTF3A-207ENST00000482655 MTFR1Q15390 333 aa7.67□□□□□ -1.18
GTF3A-207ENST00000482655 CCDC102BQ68D86 513 aa7.67□□□□□ -1.18
GTF3A-207ENST00000482655 C1orf216Q8TAB5 229 aa7.67□□□□□ -1.18
GTF3A-207ENST00000482655 RUBCNLQ9H714 662 aa7.67□□□□□ -1.18
GTF3A-207ENST00000482655 CABP1Q9NZU7 370 aa7.67□□□□□ -1.18
GTF3A-207ENST00000482655 MAFBQ9Y5Q3 323 aaPredicted RBP7.67□□□□□ -1.18
GTF3A-207ENST00000482655 PALM3A6NDB9 673 aaPredicted RBP7.66□□□□□ -1.18
GTF3A-207ENST00000482655 TATP17735 454 aaPredicted RBP7.66□□□□□ -1.18
GTF3A-207ENST00000482655 CLDN10P78369 228 aa7.66□□□□□ -1.18
GTF3A-207ENST00000482655 GAS6Q14393 721 aa7.66□□□□□ -1.18
GTF3A-207ENST00000482655 LARGE2Q8N3Y3 721 aa7.66□□□□□ -1.18
GTF3A-207ENST00000482655 SVOPQ8N4V2 548 aa7.66□□□□□ -1.18
GTF3A-207ENST00000482655 ZNF594Q96JF6 807 aaPredicted RBP7.66□□□□□ -1.18
GTF3A-207ENST00000482655 PPP1R12CQ9BZL4 782 aa7.66□□□□□ -1.18
GTF3A-207ENST00000482655 MBIPQ9NS73 344 aa7.66□□□□□ -1.18
GTF3A-207ENST00000482655 NSFL1CQ9UNZ2 370 aaKnown RBP7.66□□□□□ -1.18
GTF3A-207ENST00000482655 PHF24Q9UPV7 400 aa7.66□□□□□ -1.18
GTF3A-207ENST00000482655 ADAMTS2O95450 1211 aa7.65□□□□□ -1.18
GTF3A-207ENST00000482655 RASA1P20936 1047 aa7.65□□□□□ -1.18
GTF3A-207ENST00000482655 SRSF11Q05519 484 aaKnown RBP7.65□□□□□ -1.18
GTF3A-207ENST00000482655 SCHIP1Q9P0W5 487 aaPredicted RBP7.65□□□□□ -1.18
GTF3A-207ENST00000482655 ZNF777Q9ULD5 760 aaPredicted RBP7.65□□□□□ -1.18
GTF3A-207ENST00000482655 KIAA1024Q9UPX6 916 aa7.65□□□□□ -1.18
GTF3A-207ENST00000482655 SLURP2P0DP57 97 aa7.64□□□□□ -1.19
GTF3A-207ENST00000482655 MX2P20592 715 aa7.64□□□□□ -1.19
GTF3A-207ENST00000482655 ARSJQ5FYB0 599 aaPredicted RBP7.64□□□□□ -1.19
GTF3A-207ENST00000482655 IQSEC3Q9UPP2 1182 aaPredicted RBP7.64□□□□□ -1.19
GTF3A-207ENST00000482655 MAP3K10Q02779 954 aa7.63□□□□□ -1.19
GTF3A-207ENST00000482655 FIGNL1Q6PIW4 674 aa7.63□□□□□ -1.19
GTF3A-207ENST00000482655 LARP1Q6PKG0 1096 aaKnown RBP7.63□□□□□ -1.19
GTF3A-207ENST00000482655 SLC9A9Q8IVB4 645 aa7.63□□□□□ -1.19
GTF3A-207ENST00000482655 TNS4Q8IZW8 715 aa7.63□□□□□ -1.19
GTF3A-207ENST00000482655 SIX5Q8N196 739 aa7.63□□□□□ -1.19
GTF3A-207ENST00000482655 CRISPLD1Q9H336 500 aa7.63□□□□□ -1.19
GTF3A-207ENST00000482655 ZDHHC3Q9NYG2 299 aa7.63□□□□□ -1.19
GTF3A-207ENST00000482655 ZNF232Q9UNY5 417 aa7.63□□□□□ -1.19
GTF3A-207ENST00000482655 CHMP3Q9Y3E7 222 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms