RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 ANO8Q9HCE9 1232 aaPredicted RBP27.68■■■□□ 2.02
SEC13-217ENST00000482647 LOC102724428A0A0B4J2F2 783 aa27.67■■■□□ 2.02
SEC13-217ENST00000482647 SIK1P57059 783 aa27.67■■■□□ 2.02
SEC13-217ENST00000482647 TEFQ10587 303 aa27.67■■■□□ 2.02
SEC13-217ENST00000482647 SLC15A2Q16348 729 aa27.67■■■□□ 2.02
SEC13-217ENST00000482647 NFE2L2Q16236 605 aa27.66■■■□□ 2.02
SEC13-217ENST00000482647 CCDC184Q52MB2 194 aa27.65■■■□□ 2.02
SEC13-217ENST00000482647 MRS2Q9HD23 443 aa27.64■■■□□ 2.02
SEC13-217ENST00000482647 CCDC146Q8IYE0 955 aa27.63■■■□□ 2.01
SEC13-217ENST00000482647 RUNDC1Q96C34 613 aa27.63■■■□□ 2.01
SEC13-217ENST00000482647 RBM42Q9BTD8 480 aaKnown RBP27.63■■■□□ 2.01
SEC13-217ENST00000482647 CEMIPQ8WUJ3 1361 aa27.62■■■□□ 2.01
SEC13-217ENST00000482647 LY75O60449 1722 aa27.62■■■□□ 2.01
SEC13-217ENST00000482647 ATP6V1AP38606 617 aa27.62■■■□□ 2.01
SEC13-217ENST00000482647 MCM10Q7L590 875 aa27.62■■■□□ 2.01
SEC13-217ENST00000482647 AKT1S1Q96B36 256 aa27.62■■■□□ 2.01
SEC13-217ENST00000482647 SCN11AQ9UI33 1791 aa27.62■■■□□ 2.01
SEC13-217ENST00000482647 MRC1P22897 1456 aa27.62■■■□□ 2.01
SEC13-217ENST00000482647 ADAMTS7Q9UKP4 1686 aa27.6■■■□□ 2.01
SEC13-217ENST00000482647 PTCD1O75127 700 aaKnown RBP27.6■■■□□ 2.01
SEC13-217ENST00000482647 ZNF827Q17R98 1081 aa27.6■■■□□ 2.01
SEC13-217ENST00000482647 DCTN1Q14203 1278 aa27.59■■■□□ 2.01
SEC13-217ENST00000482647 TFCP2L1Q9NZI6 479 aa27.59■■■□□ 2.01
SEC13-217ENST00000482647 RIPK4P57078 832 aa27.58■■■□□ 2.01
SEC13-217ENST00000482647 SLC39A6Q13433 755 aa27.58■■■□□ 2.01
SEC13-217ENST00000482647 PNISRQ8TF01 805 aaKnown RBP27.58■■■□□ 2.01
SEC13-217ENST00000482647 SRCAPQ6ZRS2 3230 aa27.58■■■□□ 2.01
SEC13-217ENST00000482647 TMPOP42166 694 aaKnown RBP27.57■■■□□ 2
SEC13-217ENST00000482647 ITPK1Q13572 414 aa27.57■■■□□ 2
SEC13-217ENST00000482647 TTC5Q8N0Z6 440 aa27.56■■■□□ 2
SEC13-217ENST00000482647 SLC4A9Q96Q91 983 aa27.56■■■□□ 2
SEC13-217ENST00000482647 PAPPAQ13219 1627 aa27.56■■■□□ 2
SEC13-217ENST00000482647 BTBD11A6QL63 1104 aa27.55■■■□□ 2
SEC13-217ENST00000482647 LMOD3Q0VAK6 560 aa27.54■■■□□ 2
SEC13-217ENST00000482647 LINC00116Q8NCU8 138 aa27.54■■■□□ 2
SEC13-217ENST00000482647 ZNF790Q6PG37 636 aa27.53■■■□□ 2
SEC13-217ENST00000482647 AK7Q96M32 723 aa27.53■■■□□ 2
SEC13-217ENST00000482647 RRP7AQ9Y3A4 280 aaKnown RBP27.53■■■□□ 2
SEC13-217ENST00000482647 TAF7Q15545 349 aaPredicted RBP27.52■■■□□ 2
SEC13-217ENST00000482647 NEUROD2Q15784 382 aa27.52■■■□□ 2
SEC13-217ENST00000482647 VSIG10Q8N0Z9 540 aa27.5■■□□□ 1.99
SEC13-217ENST00000482647 PDGFDQ9GZP0 370 aaPredicted RBP27.5■■□□□ 1.99
SEC13-217ENST00000482647 THUMPD2Q9BTF0 503 aaKnown RBP27.49■■□□□ 1.99
SEC13-217ENST00000482647 PNPLA7Q6ZV29 1317 aa27.48■■□□□ 1.99
SEC13-217ENST00000482647 APAF1O14727 1248 aa27.48■■□□□ 1.99
SEC13-217ENST00000482647 FLAD1Q8NFF5 587 aa27.48■■□□□ 1.99
SEC13-217ENST00000482647 RC3H1Q5TC82 1133 aaKnown RBP27.47■■□□□ 1.99
SEC13-217ENST00000482647 ZNF496Q96IT1 587 aaPredicted RBP27.47■■□□□ 1.99
SEC13-217ENST00000482647 FMNL2Q96PY5 1086 aa27.47■■□□□ 1.99
SEC13-217ENST00000482647 DIEXFQ68CQ4 756 aaKnown RBP27.46■■□□□ 1.99
SEC13-217ENST00000482647 C5P01031 1676 aa27.46■■□□□ 1.99
SEC13-217ENST00000482647 CNTNAP4Q9C0A0 1308 aa27.45■■□□□ 1.99
SEC13-217ENST00000482647 GNPATO15228 680 aa27.45■■□□□ 1.98
SEC13-217ENST00000482647 KCNQ3O43525 872 aa27.45■■□□□ 1.98
SEC13-217ENST00000482647 DNAJC10Q8IXB1 793 aa27.45■■□□□ 1.98
SEC13-217ENST00000482647 VIRMAQ69YN4 1812 aaKnown RBP27.45■■□□□ 1.98
SEC13-217ENST00000482647 ZNF831Q5JPB2 1677 aa27.44■■□□□ 1.98
SEC13-217ENST00000482647 MSH5O43196 834 aa27.44■■□□□ 1.98
SEC13-217ENST00000482647 ZBTB7AO95365 584 aa27.44■■□□□ 1.98
SEC13-217ENST00000482647 SLC16A10Q8TF71 515 aa27.44■■□□□ 1.98
SEC13-217ENST00000482647 SPON1Q9HCB6 807 aa27.44■■□□□ 1.98
SEC13-217ENST00000482647 MIS18AQ9NYP9 233 aa27.44■■□□□ 1.98
SEC13-217ENST00000482647 TRIM35Q9UPQ4 493 aa27.44■■□□□ 1.98
SEC13-217ENST00000482647 KCPQ6ZWJ8 1503 aa27.44■■□□□ 1.98
SEC13-217ENST00000482647 C4BP0C0L5 1744 aa27.44■■□□□ 1.98
SEC13-217ENST00000482647 COL23A1Q86Y22 540 aaPredicted RBP27.43■■□□□ 1.98
SEC13-217ENST00000482647 TEX13AQ9BXU3 409 aaPredicted RBP27.43■■□□□ 1.98
SEC13-217ENST00000482647 SSFA2P28290 1259 aa27.42■■□□□ 1.98
SEC13-217ENST00000482647 CRKLP46109 303 aaKnown RBP27.42■■□□□ 1.98
SEC13-217ENST00000482647 MTFR1LQ9H019 292 aa27.42■■□□□ 1.98
SEC13-217ENST00000482647 RTCBQ9Y3I0 505 aaKnown RBP27.42■■□□□ 1.98
SEC13-217ENST00000482647 HEG1Q9ULI3 1381 aa27.42■■□□□ 1.98
SEC13-217ENST00000482647 SIPA1L3O60292 1781 aaPredicted RBP27.41■■□□□ 1.98
SEC13-217ENST00000482647 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.41■■□□□ 1.98
SEC13-217ENST00000482647 PHF14O94880 888 aa27.41■■□□□ 1.98
SEC13-217ENST00000482647 STARD3NLO95772 234 aa27.41■■□□□ 1.98
SEC13-217ENST00000482647 FAM9BQ8IZU0 186 aa27.41■■□□□ 1.98
SEC13-217ENST00000482647 DLG5Q8TDM6 1919 aa27.41■■□□□ 1.98
SEC13-217ENST00000482647 TAF1LQ8IZX4 1826 aa27.41■■□□□ 1.98
SEC13-217ENST00000482647 CYP19A1P11511 503 aaPredicted RBP27.4■■□□□ 1.98
SEC13-217ENST00000482647 BABAM1Q9NWV8 329 aa27.4■■□□□ 1.98
SEC13-217ENST00000482647 RPS6KA4O75676 772 aa27.39■■□□□ 1.98
SEC13-217ENST00000482647 TRAPPC3LQ5T215 181 aa27.39■■□□□ 1.98
SEC13-217ENST00000482647 AMIGO3Q86WK7 504 aa27.39■■□□□ 1.98
SEC13-217ENST00000482647 ATF5Q9Y2D1 282 aaPredicted RBP27.39■■□□□ 1.98
SEC13-217ENST00000482647 CCER2I3L3R5 266 aa27.38■■□□□ 1.97
SEC13-217ENST00000482647 SNRPA1P09661 255 aaKnown RBP27.38■■□□□ 1.97
SEC13-217ENST00000482647 INTS5Q6P9B9 1019 aaKnown RBP27.38■■□□□ 1.97
SEC13-217ENST00000482647 CCDC87Q9NVE4 849 aa27.38■■□□□ 1.97
SEC13-217ENST00000482647 ADRA2BP18089 450 aa27.37■■□□□ 1.97
SEC13-217ENST00000482647 SMIM5Q71RC9 77 aa27.37■■□□□ 1.97
SEC13-217ENST00000482647 TSPYL4Q9UJ04 414 aa27.37■■□□□ 1.97
SEC13-217ENST00000482647 CASZ1Q86V15 1759 aa27.37■■□□□ 1.97
SEC13-217ENST00000482647 CALD1Q05682 793 aaKnown RBP27.35■■□□□ 1.97
SEC13-217ENST00000482647 UBR2Q8IWV8 1755 aa27.35■■□□□ 1.97
SEC13-217ENST00000482647 QSER1Q2KHR3 1735 aa27.34■■□□□ 1.97
SEC13-217ENST00000482647 EIF4A1P60842 406 aaKnown RBP27.33■■□□□ 1.97
SEC13-217ENST00000482647 ARHGEF1Q92888 912 aaKnown RBP27.33■■□□□ 1.97
SEC13-217ENST00000482647 LAS1LQ9Y4W2 734 aaKnown RBP27.33■■□□□ 1.97
SEC13-217ENST00000482647 CICQ96RK0 1608 aaPredicted RBP27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms