RNA–Protein interactions for RNA: ENST00000482601.1

GTDC1-215, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 5

Gene GTDC1, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-215ENST00000482601 E9PSI1 815 aa13.25□□□□□ -0.29
GTDC1-215ENST00000482601 CHL1O00533 1208 aa13.25□□□□□ -0.29
GTDC1-215ENST00000482601 ZNF853P0CG23 659 aa13.25□□□□□ -0.29
GTDC1-215ENST00000482601 HMGB2P26583 209 aaKnown RBP13.25□□□□□ -0.29
GTDC1-215ENST00000482601 SMARCC1Q92922 1105 aaPredicted RBP13.25□□□□□ -0.29
GTDC1-215ENST00000482601 THUMPD2Q9BTF0 503 aaKnown RBP13.25□□□□□ -0.29
GTDC1-215ENST00000482601 MYH16Q9H6N6 1097 aa13.25□□□□□ -0.29
GTDC1-215ENST00000482601 BTBD11A6QL63 1104 aa13.24□□□□□ -0.29
GTDC1-215ENST00000482601 CCDC125Q86Z20 511 aa13.24□□□□□ -0.29
GTDC1-215ENST00000482601 PIGBQ92521 554 aa13.24□□□□□ -0.29
GTDC1-215ENST00000482601 SYTL4Q96C24 671 aaPredicted RBP13.24□□□□□ -0.29
GTDC1-215ENST00000482601 SALL2Q9Y467 1007 aaPredicted RBP13.24□□□□□ -0.29
GTDC1-215ENST00000482601 SIPA1L3O60292 1781 aaPredicted RBP13.24□□□□□ -0.29
GTDC1-215ENST00000482601 FAM182BQ5T319 152 aa13.23□□□□□ -0.29
GTDC1-215ENST00000482601 ZNF790Q6PG37 636 aa13.23□□□□□ -0.29
GTDC1-215ENST00000482601 ACSBG1Q96GR2 724 aa13.23□□□□□ -0.29
GTDC1-215ENST00000482601 SOS1Q07889 1333 aaPredicted RBP13.22□□□□□ -0.29
GTDC1-215ENST00000482601 KCNQ2O43526 872 aa13.22□□□□□ -0.29
GTDC1-215ENST00000482601 TTC5Q8N0Z6 440 aa13.22□□□□□ -0.29
GTDC1-215ENST00000482601 TSPYL4Q9UJ04 414 aa13.22□□□□□ -0.29
GTDC1-215ENST00000482601 PAPPAQ13219 1627 aa13.21□□□□□ -0.29
GTDC1-215ENST00000482601 ITGB4P16144 1822 aa13.21□□□□□ -0.29
GTDC1-215ENST00000482601 SBF2Q86WG5 1849 aa13.21□□□□□ -0.29
GTDC1-215ENST00000482601 SLFN5Q08AF3 891 aa13.21□□□□□ -0.29
GTDC1-215ENST00000482601 CHMP4AQ9BY43 222 aa13.21□□□□□ -0.29
GTDC1-215ENST00000482601 VIRMAQ69YN4 1812 aaKnown RBP13.2□□□□□ -0.3
GTDC1-215ENST00000482601 PLSCR1O15162 318 aa13.2□□□□□ -0.3
GTDC1-215ENST00000482601 TRIM37O94972 964 aa13.2□□□□□ -0.3
GTDC1-215ENST00000482601 TRMT2AQ8IZ69 625 aaKnown RBP13.2□□□□□ -0.3
GTDC1-215ENST00000482601 VSIG10Q8N0Z9 540 aa13.2□□□□□ -0.3
GTDC1-215ENST00000482601 MBIPQ9NS73 344 aa13.2□□□□□ -0.3
GTDC1-215ENST00000482601 ATG3Q9NT62 314 aa13.2□□□□□ -0.3
GTDC1-215ENST00000482601 PALLDQ8WX93 1383 aa13.2□□□□□ -0.3
GTDC1-215ENST00000482601 FANCIQ9NVI1 1328 aa13.19□□□□□ -0.3
GTDC1-215ENST00000482601 SENP3-EIF4A1A0A087X0R7 540 aa13.19□□□□□ -0.3
GTDC1-215ENST00000482601 HOXB7P09629 217 aa13.19□□□□□ -0.3
GTDC1-215ENST00000482601 FMNL2Q96PY5 1086 aa13.19□□□□□ -0.3
GTDC1-215ENST00000482601 KDM3BQ7LBC6 1761 aa13.19□□□□□ -0.3
GTDC1-215ENST00000482601 HEG1Q9ULI3 1381 aa13.19□□□□□ -0.3
GTDC1-215ENST00000482601 BTAF1O14981 1849 aa13.18□□□□□ -0.3
GTDC1-215ENST00000482601 RGPD3A6NKT7 1758 aaPredicted RBP13.18□□□□□ -0.3
GTDC1-215ENST00000482601 RGPD4Q7Z3J3 1758 aa13.18□□□□□ -0.3
GTDC1-215ENST00000482601 CT47B1P0C2W7 299 aaPredicted RBP13.18□□□□□ -0.3
GTDC1-215ENST00000482601 EIF4A1P60842 406 aaKnown RBP13.18□□□□□ -0.3
GTDC1-215ENST00000482601 SF3B2Q13435 895 aaKnown RBP13.18□□□□□ -0.3
GTDC1-215ENST00000482601 YTHDC1Q96MU7 727 aaKnown RBP13.18□□□□□ -0.3
GTDC1-215ENST00000482601 TEX13AQ9BXU3 409 aaPredicted RBP13.18□□□□□ -0.3
GTDC1-215ENST00000482601 ASAP1Q9ULH1 1129 aa13.18□□□□□ -0.3
GTDC1-215ENST00000482601 LAS1LQ9Y4W2 734 aaKnown RBP13.18□□□□□ -0.3
GTDC1-215ENST00000482601 KCPQ6ZWJ8 1503 aa13.18□□□□□ -0.3
GTDC1-215ENST00000482601 ZNF831Q5JPB2 1677 aa13.18□□□□□ -0.3
GTDC1-215ENST00000482601 UBR2Q8IWV8 1755 aa13.17□□□□□ -0.3
GTDC1-215ENST00000482601 SLC27A3Q5K4L6 730 aa13.17□□□□□ -0.3
GTDC1-215ENST00000482601 SPINK5Q9NQ38 1064 aaPredicted RBP13.17□□□□□ -0.3
GTDC1-215ENST00000482601 CICQ96RK0 1608 aaPredicted RBP13.17□□□□□ -0.3
GTDC1-215ENST00000482601 TNS1Q9HBL0 1735 aaKnown RBP13.16□□□□□ -0.3
GTDC1-215ENST00000482601 EP400Q96L91 3159 aa13.16□□□□□ -0.3
GTDC1-215ENST00000482601 LOC102724428A0A0B4J2F2 783 aa13.16□□□□□ -0.3
GTDC1-215ENST00000482601 APBA3O96018 575 aa13.16□□□□□ -0.3
GTDC1-215ENST00000482601 SNRPA1P09661 255 aaKnown RBP13.16□□□□□ -0.3
GTDC1-215ENST00000482601 SIK1P57059 783 aa13.16□□□□□ -0.3
GTDC1-215ENST00000482601 SLC39A6Q13433 755 aa13.16□□□□□ -0.3
GTDC1-215ENST00000482601 DUSP27Q5VZP5 1158 aa13.16□□□□□ -0.3
GTDC1-215ENST00000482601 ZNF428Q96B54 188 aa13.16□□□□□ -0.3
GTDC1-215ENST00000482601 ZNF496Q96IT1 587 aaPredicted RBP13.16□□□□□ -0.3
GTDC1-215ENST00000482601 MIS18AQ9NYP9 233 aa13.16□□□□□ -0.3
GTDC1-215ENST00000482601 KAT6BQ8WYB5 2073 aa13.16□□□□□ -0.3
GTDC1-215ENST00000482601 GIGYF1O75420 1035 aaPredicted RBP13.15□□□□□ -0.3
GTDC1-215ENST00000482601 BAG6P46379 1132 aa13.15□□□□□ -0.3
GTDC1-215ENST00000482601 PTF1AQ7RTS3 328 aa13.15□□□□□ -0.3
GTDC1-215ENST00000482601 TSR2Q969E8 191 aaKnown RBP13.15□□□□□ -0.3
GTDC1-215ENST00000482601 CDCA7LQ96GN5 454 aa13.15□□□□□ -0.3
GTDC1-215ENST00000482601 PTCD1O75127 700 aaKnown RBP13.14□□□□□ -0.31
GTDC1-215ENST00000482601 KCNQ3O43525 872 aa13.13□□□□□ -0.31
GTDC1-215ENST00000482601 STARD3NLO95772 234 aa13.13□□□□□ -0.31
GTDC1-215ENST00000482601 RBM42Q9BTD8 480 aaKnown RBP13.13□□□□□ -0.31
GTDC1-215ENST00000482601 CCNL1Q9UK58 526 aaPredicted RBP13.13□□□□□ -0.31
GTDC1-215ENST00000482601 LY75O60449 1722 aa13.13□□□□□ -0.31
GTDC1-215ENST00000482601 ERBB4Q15303 1308 aa13.13□□□□□ -0.31
GTDC1-215ENST00000482601 ATP6V1AP38606 617 aa13.12□□□□□ -0.31
GTDC1-215ENST00000482601 EXOSC9Q06265 439 aaKnown RBP13.12□□□□□ -0.31
GTDC1-215ENST00000482601 TWISTNBQ3B726 338 aaPredicted RBP13.12□□□□□ -0.31
GTDC1-215ENST00000482601 TXNRD1Q16881 649 aa13.11□□□□□ -0.31
GTDC1-215ENST00000482601 ILDR2Q71H61 639 aa13.11□□□□□ -0.31
GTDC1-215ENST00000482601 UPF1Q92900 1129 aaKnown RBP eCLIP13.11□□□□□ -0.31
GTDC1-215ENST00000482601 CAMKK2Q96RR4 588 aa13.11□□□□□ -0.31
GTDC1-215ENST00000482601 C5P01031 1676 aa13.1□□□□□ -0.31
GTDC1-215ENST00000482601 C8orf58Q8NAV2 365 aa13.1□□□□□ -0.31
GTDC1-215ENST00000482601 SLC4A9Q96Q91 983 aa13.1□□□□□ -0.31
GTDC1-215ENST00000482601 CNTNAP4Q9C0A0 1308 aa13.1□□□□□ -0.31
GTDC1-215ENST00000482601 VAMP4O75379 141 aa13.09□□□□□ -0.31
GTDC1-215ENST00000482601 CYP19A1P11511 503 aaPredicted RBP13.09□□□□□ -0.31
GTDC1-215ENST00000482601 RC3H1Q5TC82 1133 aaKnown RBP13.09□□□□□ -0.31
GTDC1-215ENST00000482601 HDGFL1Q5TGJ6 251 aa13.09□□□□□ -0.31
GTDC1-215ENST00000482601 CCDC30Q5VVM6 783 aa13.09□□□□□ -0.31
GTDC1-215ENST00000482601 LAMB4A4D0S4 1761 aa13.09□□□□□ -0.31
GTDC1-215ENST00000482601 ITPK1Q13572 414 aa13.08□□□□□ -0.32
GTDC1-215ENST00000482601 KRT24Q2M2I5 525 aa13.08□□□□□ -0.32
GTDC1-215ENST00000482601 ALDH1L2Q3SY69 923 aa13.08□□□□□ -0.32
GTDC1-215ENST00000482601 DNAJC10Q8IXB1 793 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms