RNA–Protein interactions for RNA: ENST00000481738.1

LINC00544-202, long intergenic non-protein coding RNA 544, humanhuman

TSL 3 BASIC

Gene LINC00544, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-202ENST00000481738 SGIP1Q9BQI5 828 aa12.08□□□□□ -0.48
LINC00544-202ENST00000481738 RBM42Q9BTD8 480 aaKnown RBP12.08□□□□□ -0.48
LINC00544-202ENST00000481738 RNMTO43148 476 aaKnown RBP12.07□□□□□ -0.48
LINC00544-202ENST00000481738 NFATC2IPQ8NCF5 419 aa12.07□□□□□ -0.48
LINC00544-202ENST00000481738 LINC00116Q8NCU8 138 aa12.07□□□□□ -0.48
LINC00544-202ENST00000481738 AK7Q96M32 723 aa12.07□□□□□ -0.48
LINC00544-202ENST00000481738 LGR6Q9HBX8 967 aa12.07□□□□□ -0.48
LINC00544-202ENST00000481738 NUDCQ9Y266 331 aa12.07□□□□□ -0.48
LINC00544-202ENST00000481738 DDX10Q13206 875 aaKnown RBP12.06□□□□□ -0.48
LINC00544-202ENST00000481738 PHF14O94880 888 aa12.05□□□□□ -0.48
LINC00544-202ENST00000481738 U2AF1L5P0DN76 240 aaPredicted RBP12.05□□□□□ -0.48
LINC00544-202ENST00000481738 PRKAR2BP31323 418 aa12.05□□□□□ -0.48
LINC00544-202ENST00000481738 U2AF1Q01081 240 aaKnown RBP eCLIP12.05□□□□□ -0.48
LINC00544-202ENST00000481738 SMIM5Q71RC9 77 aa12.05□□□□□ -0.48
LINC00544-202ENST00000481738 FLAD1Q8NFF5 587 aa12.05□□□□□ -0.48
LINC00544-202ENST00000481738 SLC4A9Q96Q91 983 aa12.05□□□□□ -0.48
LINC00544-202ENST00000481738 ARXQ96QS3 562 aa12.05□□□□□ -0.48
LINC00544-202ENST00000481738 SLC52A2Q9HAB3 445 aa12.05□□□□□ -0.48
LINC00544-202ENST00000481738 VIRMAQ69YN4 1812 aaKnown RBP12.04□□□□□ -0.48
LINC00544-202ENST00000481738 UBR3Q6ZT12 1888 aa12.04□□□□□ -0.48
LINC00544-202ENST00000481738 PTCD1O75127 700 aaKnown RBP12.04□□□□□ -0.48
LINC00544-202ENST00000481738 POLD1P28340 1107 aa12.04□□□□□ -0.48
LINC00544-202ENST00000481738 MSL1Q68DK7 614 aa12.04□□□□□ -0.48
LINC00544-202ENST00000481738 AMIGO3Q86WK7 504 aa12.04□□□□□ -0.48
LINC00544-202ENST00000481738 GAS2L2Q8NHY3 880 aa12.04□□□□□ -0.48
LINC00544-202ENST00000481738 FHDC1Q9C0D6 1143 aaPredicted RBP12.04□□□□□ -0.48
LINC00544-202ENST00000481738 RSPH6AQ9H0K4 717 aa12.04□□□□□ -0.48
LINC00544-202ENST00000481738 COL24A1Q17RW2 1714 aa12.03□□□□□ -0.48
LINC00544-202ENST00000481738 MRC1P22897 1456 aa12.03□□□□□ -0.48
LINC00544-202ENST00000481738 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.03□□□□□ -0.48
LINC00544-202ENST00000481738 GNPATO15228 680 aa12.03□□□□□ -0.48
LINC00544-202ENST00000481738 PHACTR3Q96KR7 559 aa12.03□□□□□ -0.48
LINC00544-202ENST00000481738 SYT17Q9BSW7 474 aa12.03□□□□□ -0.48
LINC00544-202ENST00000481738 ZNF831Q5JPB2 1677 aa12.03□□□□□ -0.48
LINC00544-202ENST00000481738 ADAMTS7Q9UKP4 1686 aa12.03□□□□□ -0.48
LINC00544-202ENST00000481738 MAP3K5Q99683 1374 aa12.03□□□□□ -0.48
LINC00544-202ENST00000481738 GNAT3A8MTJ3 354 aa12.02□□□□□ -0.49
LINC00544-202ENST00000481738 SSFA2P28290 1259 aa12.02□□□□□ -0.49
LINC00544-202ENST00000481738 ZEB1P37275 1124 aaPredicted RBP12.02□□□□□ -0.49
LINC00544-202ENST00000481738 KLHL34Q8N239 644 aa12.02□□□□□ -0.49
LINC00544-202ENST00000481738 COL5A3P25940 1745 aaPredicted RBP12.01□□□□□ -0.49
LINC00544-202ENST00000481738 FCHSD2O94868 740 aa12.01□□□□□ -0.49
LINC00544-202ENST00000481738 SLC39A6Q13433 755 aa12.01□□□□□ -0.49
LINC00544-202ENST00000481738 TJP1Q07157 1748 aa12□□□□□ -0.49
LINC00544-202ENST00000481738 DCAF8L1A6NGE4 600 aa12□□□□□ -0.49
LINC00544-202ENST00000481738 RALBP1Q15311 655 aa12□□□□□ -0.49
LINC00544-202ENST00000481738 RC3H1Q5TC82 1133 aaKnown RBP12□□□□□ -0.49
LINC00544-202ENST00000481738 IL17REQ8NFR9 667 aa12□□□□□ -0.49
LINC00544-202ENST00000481738 RTCBQ9Y3I0 505 aaKnown RBP12□□□□□ -0.49
LINC00544-202ENST00000481738 CNTNAP4Q9C0A0 1308 aa12□□□□□ -0.49
LINC00544-202ENST00000481738 TEFQ10587 303 aa11.99□□□□□ -0.49
LINC00544-202ENST00000481738 CICQ96RK0 1608 aaPredicted RBP11.98□□□□□ -0.49
LINC00544-202ENST00000481738 KCPQ6ZWJ8 1503 aa11.98□□□□□ -0.49
LINC00544-202ENST00000481738 RPS6KA4O75676 772 aa11.98□□□□□ -0.49
LINC00544-202ENST00000481738 CRKLP46109 303 aaKnown RBP11.98□□□□□ -0.49
LINC00544-202ENST00000481738 TRAPPC3LQ5T215 181 aa11.98□□□□□ -0.49
LINC00544-202ENST00000481738 DNAJC10Q8IXB1 793 aa11.98□□□□□ -0.49
LINC00544-202ENST00000481738 MYH14Q7Z406 1995 aaKnown RBP11.98□□□□□ -0.49
LINC00544-202ENST00000481738 NEFMP07197 916 aa11.97□□□□□ -0.49
LINC00544-202ENST00000481738 TTC5Q8N0Z6 440 aa11.97□□□□□ -0.49
LINC00544-202ENST00000481738 ARHGEF1Q92888 912 aaKnown RBP11.97□□□□□ -0.49
LINC00544-202ENST00000481738 SIPA1L3O60292 1781 aaPredicted RBP11.97□□□□□ -0.49
LINC00544-202ENST00000481738 CEMIPQ8WUJ3 1361 aa11.96□□□□□ -0.49
LINC00544-202ENST00000481738 MYBBP1AQ9BQG0 1328 aaKnown RBP11.96□□□□□ -0.49
LINC00544-202ENST00000481738 ADRA2BP18089 450 aa11.96□□□□□ -0.49
LINC00544-202ENST00000481738 RTF1Q92541 710 aaKnown RBP11.96□□□□□ -0.49
LINC00544-202ENST00000481738 UBR2Q8IWV8 1755 aa11.96□□□□□ -0.49
LINC00544-202ENST00000481738 SRCAPQ6ZRS2 3230 aa11.96□□□□□ -0.5
LINC00544-202ENST00000481738 CYP19A1P11511 503 aaPredicted RBP11.95□□□□□ -0.5
LINC00544-202ENST00000481738 RFC4P35249 363 aa11.95□□□□□ -0.5
LINC00544-202ENST00000481738 DCTN1Q14203 1278 aa11.95□□□□□ -0.5
LINC00544-202ENST00000481738 INTS5Q6P9B9 1019 aaKnown RBP11.95□□□□□ -0.5
LINC00544-202ENST00000481738 ZNF790Q6PG37 636 aa11.95□□□□□ -0.5
LINC00544-202ENST00000481738 MCM10Q7L590 875 aa11.95□□□□□ -0.5
LINC00544-202ENST00000481738 NLGN2Q8NFZ4 835 aa11.95□□□□□ -0.5
LINC00544-202ENST00000481738 CCDC87Q9NVE4 849 aa11.95□□□□□ -0.5
LINC00544-202ENST00000481738 BTBD11A6QL63 1104 aa11.94□□□□□ -0.5
LINC00544-202ENST00000481738 VSIG10Q8N0Z9 540 aa11.94□□□□□ -0.5
LINC00544-202ENST00000481738 ZNF496Q96IT1 587 aaPredicted RBP11.94□□□□□ -0.5
LINC00544-202ENST00000481738 PLEKHF1Q96S99 279 aa11.94□□□□□ -0.5
LINC00544-202ENST00000481738 C4AP0C0L4 1744 aa11.94□□□□□ -0.5
LINC00544-202ENST00000481738 HEG1Q9ULI3 1381 aa11.93□□□□□ -0.5
LINC00544-202ENST00000481738 KCNQ3O43525 872 aa11.93□□□□□ -0.5
LINC00544-202ENST00000481738 HTATSF1O43719 755 aaKnown RBP11.93□□□□□ -0.5
LINC00544-202ENST00000481738 MMP10P09238 476 aa11.93□□□□□ -0.5
LINC00544-202ENST00000481738 GYS1P13807 737 aa11.93□□□□□ -0.5
LINC00544-202ENST00000481738 PELP1Q8IZL8 1130 aaKnown RBP11.93□□□□□ -0.5
LINC00544-202ENST00000481738 NLGN1Q8N2Q7 840 aa11.93□□□□□ -0.5
LINC00544-202ENST00000481738 PNNQ9H307 717 aaKnown RBP11.93□□□□□ -0.5
LINC00544-202ENST00000481738 SRP68Q9UHB9 627 aaKnown RBP11.93□□□□□ -0.5
LINC00544-202ENST00000481738 MAPK8IP3Q9UPT6 1336 aa11.92□□□□□ -0.5
LINC00544-202ENST00000481738 DLG5Q8TDM6 1919 aa11.92□□□□□ -0.5
LINC00544-202ENST00000481738 GPR162Q16538 588 aa11.92□□□□□ -0.5
LINC00544-202ENST00000481738 FMNL2Q96PY5 1086 aa11.92□□□□□ -0.5
LINC00544-202ENST00000481738 PRKRIP1Q9H875 184 aaPredicted RBP11.92□□□□□ -0.5
LINC00544-202ENST00000481738 ZBTB1Q9Y2K1 713 aa11.92□□□□□ -0.5
LINC00544-202ENST00000481738 CD2APQ9Y5K6 639 aa11.92□□□□□ -0.5
LINC00544-202ENST00000481738 SOS1Q07889 1333 aaPredicted RBP11.91□□□□□ -0.5
LINC00544-202ENST00000481738 USP42Q9H9J4 1324 aaKnown RBP11.91□□□□□ -0.5
LINC00544-202ENST00000481738 STARD3NLO95772 234 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms