RNA–Protein interactions for RNA: ENST00000481710.5

SMIM11A-205, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-205ENST00000481710 LRRC4BQ9NT99 713 aa23.34■■□□□ 1.33
SMIM11A-205ENST00000481710 ASAP1Q9ULH1 1129 aa23.34■■□□□ 1.33
SMIM11A-205ENST00000481710 CICQ96RK0 1608 aaPredicted RBP23.33■■□□□ 1.33
SMIM11A-205ENST00000481710 QSER1Q2KHR3 1735 aa23.33■■□□□ 1.33
SMIM11A-205ENST00000481710 CEMIPQ8WUJ3 1361 aa23.33■■□□□ 1.33
SMIM11A-205ENST00000481710 NEFMP07197 916 aa23.33■■□□□ 1.33
SMIM11A-205ENST00000481710 KCNQ4P56696 695 aa23.33■■□□□ 1.33
SMIM11A-205ENST00000481710 NFATC2IPQ8NCF5 419 aa23.33■■□□□ 1.33
SMIM11A-205ENST00000481710 IL17REQ8NFR9 667 aa23.33■■□□□ 1.33
SMIM11A-205ENST00000481710 SLC52A2Q9HAB3 445 aa23.33■■□□□ 1.33
SMIM11A-205ENST00000481710 ANO8Q9HCE9 1232 aaPredicted RBP23.32■■□□□ 1.32
SMIM11A-205ENST00000481710 ATG3Q9NT62 314 aa23.32■■□□□ 1.32
SMIM11A-205ENST00000481710 C4BP0C0L5 1744 aa23.31■■□□□ 1.32
SMIM11A-205ENST00000481710 NFE2L2Q16236 605 aa23.31■■□□□ 1.32
SMIM11A-205ENST00000481710 SMARCC1Q92922 1105 aaPredicted RBP23.31■■□□□ 1.32
SMIM11A-205ENST00000481710 CASZ1Q86V15 1759 aa23.3■■□□□ 1.32
SMIM11A-205ENST00000481710 SLC27A3Q5K4L6 730 aa23.3■■□□□ 1.32
SMIM11A-205ENST00000481710 CCNL1Q9UK58 526 aaPredicted RBP23.3■■□□□ 1.32
SMIM11A-205ENST00000481710 KDM3BQ7LBC6 1761 aa23.29■■□□□ 1.32
SMIM11A-205ENST00000481710 KCPQ6ZWJ8 1503 aa23.29■■□□□ 1.32
SMIM11A-205ENST00000481710 MCM10Q7L590 875 aa23.29■■□□□ 1.32
SMIM11A-205ENST00000481710 RUNDC1Q96C34 613 aa23.29■■□□□ 1.32
SMIM11A-205ENST00000481710 PSDA5PKW4 1024 aaPredicted RBP23.28■■□□□ 1.32
SMIM11A-205ENST00000481710 DCTN1Q14203 1278 aa23.28■■□□□ 1.32
SMIM11A-205ENST00000481710 UBR3Q6ZT12 1888 aa23.28■■□□□ 1.32
SMIM11A-205ENST00000481710 R3HDM1Q15032 1099 aaKnown RBP23.27■■□□□ 1.32
SMIM11A-205ENST00000481710 PNISRQ8TF01 805 aaKnown RBP23.27■■□□□ 1.32
SMIM11A-205ENST00000481710 RTF1Q92541 710 aaKnown RBP23.27■■□□□ 1.32
SMIM11A-205ENST00000481710 TEFQ10587 303 aa23.26■■□□□ 1.31
SMIM11A-205ENST00000481710 NBPF14Q5TI25 921 aa23.26■■□□□ 1.31
SMIM11A-205ENST00000481710 LOC102724428A0A0B4J2F2 783 aa23.25■■□□□ 1.31
SMIM11A-205ENST00000481710 HTATSF1O43719 755 aaKnown RBP23.25■■□□□ 1.31
SMIM11A-205ENST00000481710 TMPOP42166 694 aaKnown RBP23.25■■□□□ 1.31
SMIM11A-205ENST00000481710 SIK1P57059 783 aa23.25■■□□□ 1.31
SMIM11A-205ENST00000481710 ZNF827Q17R98 1081 aa23.25■■□□□ 1.31
SMIM11A-205ENST00000481710 RRP7AQ9Y3A4 280 aaKnown RBP23.25■■□□□ 1.31
SMIM11A-205ENST00000481710 SLC39A6Q13433 755 aa23.24■■□□□ 1.31
SMIM11A-205ENST00000481710 DIEXFQ68CQ4 756 aaKnown RBP23.24■■□□□ 1.31
SMIM11A-205ENST00000481710 SLC4A9Q96Q91 983 aa23.24■■□□□ 1.31
SMIM11A-205ENST00000481710 RBM42Q9BTD8 480 aaKnown RBP23.23■■□□□ 1.31
SMIM11A-205ENST00000481710 MYH14Q7Z406 1995 aaKnown RBP23.23■■□□□ 1.31
SMIM11A-205ENST00000481710 RIPK4P57078 832 aa23.22■■□□□ 1.31
SMIM11A-205ENST00000481710 ITPK1Q13572 414 aa23.22■■□□□ 1.31
SMIM11A-205ENST00000481710 THUMPD2Q9BTF0 503 aaKnown RBP23.22■■□□□ 1.31
SMIM11A-205ENST00000481710 STK32BQ9NY57 414 aa23.22■■□□□ 1.31
SMIM11A-205ENST00000481710 PTCD1O75127 700 aaKnown RBP23.21■■□□□ 1.31
SMIM11A-205ENST00000481710 SLC15A2Q16348 729 aa23.21■■□□□ 1.31
SMIM11A-205ENST00000481710 AKT1S1Q96B36 256 aa23.21■■□□□ 1.31
SMIM11A-205ENST00000481710 ATP6V1AP38606 617 aa23.2■■□□□ 1.3
SMIM11A-205ENST00000481710 NEUROD2Q15784 382 aa23.2■■□□□ 1.3
SMIM11A-205ENST00000481710 LINC00116Q8NCU8 138 aa23.2■■□□□ 1.3
SMIM11A-205ENST00000481710 APAF1O14727 1248 aa23.18■■□□□ 1.3
SMIM11A-205ENST00000481710 LAMB4A4D0S4 1761 aa23.18■■□□□ 1.3
SMIM11A-205ENST00000481710 BTBD11A6QL63 1104 aa23.17■■□□□ 1.3
SMIM11A-205ENST00000481710 TRIM35Q9UPQ4 493 aa23.17■■□□□ 1.3
SMIM11A-205ENST00000481710 C4AP0C0L4 1744 aa23.16■■□□□ 1.3
SMIM11A-205ENST00000481710 KCNQ3O43525 872 aa23.16■■□□□ 1.3
SMIM11A-205ENST00000481710 LMOD3Q0VAK6 560 aa23.16■■□□□ 1.3
SMIM11A-205ENST00000481710 ZNF790Q6PG37 636 aa23.16■■□□□ 1.3
SMIM11A-205ENST00000481710 FAM9BQ8IZU0 186 aa23.16■■□□□ 1.3
SMIM11A-205ENST00000481710 PDGFDQ9GZP0 370 aaPredicted RBP23.16■■□□□ 1.3
SMIM11A-205ENST00000481710 LRP5O75197 1615 aa23.15■■□□□ 1.3
SMIM11A-205ENST00000481710 TTC5Q8N0Z6 440 aa23.15■■□□□ 1.3
SMIM11A-205ENST00000481710 SENP3-EIF4A1A0A087X0R7 540 aa23.14■■□□□ 1.29
SMIM11A-205ENST00000481710 PNPLA7Q6ZV29 1317 aa23.13■■□□□ 1.29
SMIM11A-205ENST00000481710 TAF7Q15545 349 aaPredicted RBP23.13■■□□□ 1.29
SMIM11A-205ENST00000481710 ZNF496Q96IT1 587 aaPredicted RBP23.13■■□□□ 1.29
SMIM11A-205ENST00000481710 MIS18AQ9NYP9 233 aa23.13■■□□□ 1.29
SMIM11A-205ENST00000481710 COL24A1Q17RW2 1714 aa23.13■■□□□ 1.29
SMIM11A-205ENST00000481710 HEG1Q9ULI3 1381 aa23.13■■□□□ 1.29
SMIM11A-205ENST00000481710 CCER2I3L3R5 266 aa23.12■■□□□ 1.29
SMIM11A-205ENST00000481710 AMIGO3Q86WK7 504 aa23.12■■□□□ 1.29
SMIM11A-205ENST00000481710 DNAJC10Q8IXB1 793 aa23.12■■□□□ 1.29
SMIM11A-205ENST00000481710 AK7Q96M32 723 aa23.12■■□□□ 1.29
SMIM11A-205ENST00000481710 TFCP2L1Q9NZI6 479 aa23.12■■□□□ 1.29
SMIM11A-205ENST00000481710 MIER1Q8N108 512 aa23.11■■□□□ 1.29
SMIM11A-205ENST00000481710 CNTNAP4Q9C0A0 1308 aa23.09■■□□□ 1.29
SMIM11A-205ENST00000481710 SMIM5Q71RC9 77 aa23.09■■□□□ 1.29
SMIM11A-205ENST00000481710 VSIG10Q8N0Z9 540 aa23.09■■□□□ 1.29
SMIM11A-205ENST00000481710 FMNL2Q96PY5 1086 aa23.09■■□□□ 1.29
SMIM11A-205ENST00000481710 HMGB2P26583 209 aaKnown RBP23.08■■□□□ 1.29
SMIM11A-205ENST00000481710 GNPATO15228 680 aa23.07■■□□□ 1.28
SMIM11A-205ENST00000481710 CRKLP46109 303 aaKnown RBP23.07■■□□□ 1.28
SMIM11A-205ENST00000481710 PRAMEF22A3QJZ6 481 aa23.05■■□□□ 1.28
SMIM11A-205ENST00000481710 PHF14O94880 888 aa23.05■■□□□ 1.28
SMIM11A-205ENST00000481710 CYP19A1P11511 503 aaPredicted RBP23.05■■□□□ 1.28
SMIM11A-205ENST00000481710 RC3H1Q5TC82 1133 aaKnown RBP23.05■■□□□ 1.28
SMIM11A-205ENST00000481710 COL23A1Q86Y22 540 aaPredicted RBP23.05■■□□□ 1.28
SMIM11A-205ENST00000481710 TSPYL4Q9UJ04 414 aa23.05■■□□□ 1.28
SMIM11A-205ENST00000481710 ZBTB7AO95365 584 aa23.04■■□□□ 1.28
SMIM11A-205ENST00000481710 SRCAPQ6ZRS2 3230 aa23.04■■□□□ 1.28
SMIM11A-205ENST00000481710 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.03■■□□□ 1.28
SMIM11A-205ENST00000481710 SSFA2P28290 1259 aa23.03■■□□□ 1.28
SMIM11A-205ENST00000481710 INTS5Q6P9B9 1019 aaKnown RBP23.03■■□□□ 1.28
SMIM11A-205ENST00000481710 CCDC87Q9NVE4 849 aa23.03■■□□□ 1.28
SMIM11A-205ENST00000481710 EIF4A1P60842 406 aaKnown RBP23.02■■□□□ 1.28
SMIM11A-205ENST00000481710 LAS1LQ9Y4W2 734 aaKnown RBP23.02■■□□□ 1.28
SMIM11A-205ENST00000481710 MSH5O43196 834 aa23.01■■□□□ 1.27
SMIM11A-205ENST00000481710 RPS6KA4O75676 772 aa23.01■■□□□ 1.27
SMIM11A-205ENST00000481710 CCDC27Q2M243 656 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms