RNA–Protein interactions for RNA: ENST00000481281.5

HDAC1-207, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-207ENST00000481281 TFCP2L1Q9NZI6 479 aa17.51■□□□□ 0.39
HDAC1-207ENST00000481281 CICQ96RK0 1608 aaPredicted RBP17.5■□□□□ 0.39
HDAC1-207ENST00000481281 COL5A3P25940 1745 aaPredicted RBP17.5■□□□□ 0.39
HDAC1-207ENST00000481281 DDX10Q13206 875 aaKnown RBP17.5■□□□□ 0.39
HDAC1-207ENST00000481281 SLC16A10Q8TF71 515 aa17.49■□□□□ 0.39
HDAC1-207ENST00000481281 SGIP1Q9BQI5 828 aa17.49■□□□□ 0.39
HDAC1-207ENST00000481281 RSPH6AQ9H0K4 717 aa17.49■□□□□ 0.39
HDAC1-207ENST00000481281 NUDCQ9Y266 331 aa17.49■□□□□ 0.39
HDAC1-207ENST00000481281 NFATC2IPQ8NCF5 419 aa17.48■□□□□ 0.39
HDAC1-207ENST00000481281 ATF5Q9Y2D1 282 aaPredicted RBP17.48■□□□□ 0.39
HDAC1-207ENST00000481281 PRKAR2BP31323 418 aa17.47■□□□□ 0.39
HDAC1-207ENST00000481281 ITPK1Q13572 414 aa17.47■□□□□ 0.39
HDAC1-207ENST00000481281 LINC00116Q8NCU8 138 aa17.47■□□□□ 0.39
HDAC1-207ENST00000481281 LGR6Q9HBX8 967 aa17.47■□□□□ 0.39
HDAC1-207ENST00000481281 TJP1Q07157 1748 aa17.47■□□□□ 0.39
HDAC1-207ENST00000481281 SIPA1L3O60292 1781 aaPredicted RBP17.46■□□□□ 0.39
HDAC1-207ENST00000481281 MAP3K5Q99683 1374 aa17.46■□□□□ 0.39
HDAC1-207ENST00000481281 RNMTO43148 476 aaKnown RBP17.46■□□□□ 0.39
HDAC1-207ENST00000481281 ATP6V1AP38606 617 aa17.46■□□□□ 0.39
HDAC1-207ENST00000481281 RALBP1Q15311 655 aa17.46■□□□□ 0.39
HDAC1-207ENST00000481281 GAS2L2Q8NHY3 880 aa17.46■□□□□ 0.39
HDAC1-207ENST00000481281 SLC4A9Q96Q91 983 aa17.46■□□□□ 0.39
HDAC1-207ENST00000481281 SLC52A2Q9HAB3 445 aa17.46■□□□□ 0.39
HDAC1-207ENST00000481281 PPP1R1BQ9UD71 204 aaPredicted RBP17.46■□□□□ 0.39
HDAC1-207ENST00000481281 U2AF1L5P0DN76 240 aaPredicted RBP17.45■□□□□ 0.38
HDAC1-207ENST00000481281 U2AF1Q01081 240 aaKnown RBP eCLIP17.45■□□□□ 0.38
HDAC1-207ENST00000481281 COL23A1Q86Y22 540 aaPredicted RBP17.45■□□□□ 0.38
HDAC1-207ENST00000481281 UBR2Q8IWV8 1755 aa17.45■□□□□ 0.38
HDAC1-207ENST00000481281 FCHSD2O94868 740 aa17.44■□□□□ 0.38
HDAC1-207ENST00000481281 AMIGO3Q86WK7 504 aa17.44■□□□□ 0.38
HDAC1-207ENST00000481281 FLAD1Q8NFF5 587 aa17.44■□□□□ 0.38
HDAC1-207ENST00000481281 PHACTR3Q96KR7 559 aa17.44■□□□□ 0.38
HDAC1-207ENST00000481281 AK7Q96M32 723 aa17.44■□□□□ 0.38
HDAC1-207ENST00000481281 RBM42Q9BTD8 480 aaKnown RBP17.43■□□□□ 0.38
HDAC1-207ENST00000481281 KCPQ6ZWJ8 1503 aa17.42■□□□□ 0.38
HDAC1-207ENST00000481281 GNAT3A8MTJ3 354 aa17.42■□□□□ 0.38
HDAC1-207ENST00000481281 MYH14Q7Z406 1995 aaKnown RBP17.42■□□□□ 0.38
HDAC1-207ENST00000481281 CEMIPQ8WUJ3 1361 aa17.41■□□□□ 0.38
HDAC1-207ENST00000481281 SSFA2P28290 1259 aa17.41■□□□□ 0.38
HDAC1-207ENST00000481281 IL17REQ8NFR9 667 aa17.41■□□□□ 0.38
HDAC1-207ENST00000481281 CNTNAP4Q9C0A0 1308 aa17.41■□□□□ 0.38
HDAC1-207ENST00000481281 PTCD1O75127 700 aaKnown RBP17.4■□□□□ 0.38
HDAC1-207ENST00000481281 ARXQ96QS3 562 aa17.4■□□□□ 0.38
HDAC1-207ENST00000481281 MYBBP1AQ9BQG0 1328 aaKnown RBP17.4■□□□□ 0.38
HDAC1-207ENST00000481281 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.39■□□□□ 0.37
HDAC1-207ENST00000481281 GNPATO15228 680 aa17.39■□□□□ 0.37
HDAC1-207ENST00000481281 MSH5O43196 834 aa17.39■□□□□ 0.37
HDAC1-207ENST00000481281 DLG5Q8TDM6 1919 aa17.39■□□□□ 0.37
HDAC1-207ENST00000481281 C4AP0C0L4 1744 aa17.38■□□□□ 0.37
HDAC1-207ENST00000481281 POLD1P28340 1107 aa17.38■□□□□ 0.37
HDAC1-207ENST00000481281 RC3H1Q5TC82 1133 aaKnown RBP17.38■□□□□ 0.37
HDAC1-207ENST00000481281 PHF14O94880 888 aa17.37■□□□□ 0.37
HDAC1-207ENST00000481281 SLC39A6Q13433 755 aa17.37■□□□□ 0.37
HDAC1-207ENST00000481281 SMIM5Q71RC9 77 aa17.37■□□□□ 0.37
HDAC1-207ENST00000481281 FHDC1Q9C0D6 1143 aaPredicted RBP17.37■□□□□ 0.37
HDAC1-207ENST00000481281 TEFQ10587 303 aa17.36■□□□□ 0.37
HDAC1-207ENST00000481281 PLEKHF1Q96S99 279 aa17.36■□□□□ 0.37
HDAC1-207ENST00000481281 MSL1Q68DK7 614 aa17.35■□□□□ 0.37
HDAC1-207ENST00000481281 SYT17Q9BSW7 474 aa17.35■□□□□ 0.37
HDAC1-207ENST00000481281 PRKRIP1Q9H875 184 aaPredicted RBP17.35■□□□□ 0.37
HDAC1-207ENST00000481281 RTCBQ9Y3I0 505 aaKnown RBP17.35■□□□□ 0.37
HDAC1-207ENST00000481281 RPS6KA4O75676 772 aa17.34■□□□□ 0.37
HDAC1-207ENST00000481281 ADRA2BP18089 450 aa17.34■□□□□ 0.37
HDAC1-207ENST00000481281 CRKLP46109 303 aaKnown RBP17.34■□□□□ 0.37
HDAC1-207ENST00000481281 VSIG10Q8N0Z9 540 aa17.34■□□□□ 0.37
HDAC1-207ENST00000481281 HTATSF1O43719 755 aaKnown RBP17.33■□□□□ 0.36
HDAC1-207ENST00000481281 DNAJC10Q8IXB1 793 aa17.33■□□□□ 0.36
HDAC1-207ENST00000481281 NEFMP07197 916 aa17.32■□□□□ 0.36
HDAC1-207ENST00000481281 TRAPPC3LQ5T215 181 aa17.32■□□□□ 0.36
HDAC1-207ENST00000481281 ZNF790Q6PG37 636 aa17.32■□□□□ 0.36
HDAC1-207ENST00000481281 TTC5Q8N0Z6 440 aa17.32■□□□□ 0.36
HDAC1-207ENST00000481281 RTF1Q92541 710 aaKnown RBP17.32■□□□□ 0.36
HDAC1-207ENST00000481281 CYP19A1P11511 503 aaPredicted RBP17.31■□□□□ 0.36
HDAC1-207ENST00000481281 INTS5Q6P9B9 1019 aaKnown RBP17.31■□□□□ 0.36
HDAC1-207ENST00000481281 MCM10Q7L590 875 aa17.31■□□□□ 0.36
HDAC1-207ENST00000481281 PNNQ9H307 717 aaKnown RBP17.31■□□□□ 0.36
HDAC1-207ENST00000481281 HEG1Q9ULI3 1381 aa17.3■□□□□ 0.36
HDAC1-207ENST00000481281 ARHGEF1Q92888 912 aaKnown RBP17.3■□□□□ 0.36
HDAC1-207ENST00000481281 ZNF496Q96IT1 587 aaPredicted RBP17.3■□□□□ 0.36
HDAC1-207ENST00000481281 CCDC87Q9NVE4 849 aa17.3■□□□□ 0.36
HDAC1-207ENST00000481281 MAPK8IP3Q9UPT6 1336 aa17.29■□□□□ 0.36
HDAC1-207ENST00000481281 ZNF316A6NFI3 1004 aaPredicted RBP17.29■□□□□ 0.36
HDAC1-207ENST00000481281 DCTN1Q14203 1278 aa17.29■□□□□ 0.36
HDAC1-207ENST00000481281 NFE2L2Q16236 605 aa17.29■□□□□ 0.36
HDAC1-207ENST00000481281 KDM3BQ7LBC6 1761 aa17.28■□□□□ 0.36
HDAC1-207ENST00000481281 BTBD11A6QL63 1104 aa17.28■□□□□ 0.36
HDAC1-207ENST00000481281 SOS1Q07889 1333 aaPredicted RBP17.27■□□□□ 0.36
HDAC1-207ENST00000481281 RFC4P35249 363 aa17.27■□□□□ 0.36
HDAC1-207ENST00000481281 FMNL2Q96PY5 1086 aa17.27■□□□□ 0.36
HDAC1-207ENST00000481281 USP42Q9H9J4 1324 aaKnown RBP17.26■□□□□ 0.35
HDAC1-207ENST00000481281 KCNQ3O43525 872 aa17.26■□□□□ 0.35
HDAC1-207ENST00000481281 GYS1P13807 737 aa17.26■□□□□ 0.35
HDAC1-207ENST00000481281 KLHL34Q8N239 644 aa17.26■□□□□ 0.35
HDAC1-207ENST00000481281 ZBTB1Q9Y2K1 713 aa17.26■□□□□ 0.35
HDAC1-207ENST00000481281 KIF13BQ9NQT8 1826 aa17.26■□□□□ 0.35
HDAC1-207ENST00000481281 NLGN1Q8N2Q7 840 aa17.25■□□□□ 0.35
HDAC1-207ENST00000481281 NLGN2Q8NFZ4 835 aa17.25■□□□□ 0.35
HDAC1-207ENST00000481281 TEX13AQ9BXU3 409 aaPredicted RBP17.25■□□□□ 0.35
HDAC1-207ENST00000481281 COL15A1P39059 1388 aa17.25■□□□□ 0.35
HDAC1-207ENST00000481281 DCAF8L1A6NGE4 600 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms