RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-215ENST00000481116 NFATC2IPQ8NCF5 419 aa17.31■□□□□ 0.36
ABCF3-215ENST00000481116 CFAP53Q96M91 514 aa17.31■□□□□ 0.36
ABCF3-215ENST00000481116 MSH5O43196 834 aa17.3■□□□□ 0.36
ABCF3-215ENST00000481116 ATP6V1AP38606 617 aa17.3■□□□□ 0.36
ABCF3-215ENST00000481116 ITPK1Q13572 414 aa17.3■□□□□ 0.36
ABCF3-215ENST00000481116 COL23A1Q86Y22 540 aaPredicted RBP17.3■□□□□ 0.36
ABCF3-215ENST00000481116 LINC00116Q8NCU8 138 aa17.3■□□□□ 0.36
ABCF3-215ENST00000481116 SGIP1Q9BQI5 828 aa17.3■□□□□ 0.36
ABCF3-215ENST00000481116 RBM42Q9BTD8 480 aaKnown RBP17.3■□□□□ 0.36
ABCF3-215ENST00000481116 COL5A3P25940 1745 aaPredicted RBP17.3■□□□□ 0.36
ABCF3-215ENST00000481116 AMIGO3Q86WK7 504 aa17.29■□□□□ 0.36
ABCF3-215ENST00000481116 SLC4A9Q96Q91 983 aa17.29■□□□□ 0.36
ABCF3-215ENST00000481116 ADAMTS7Q9UKP4 1686 aa17.29■□□□□ 0.36
ABCF3-215ENST00000481116 RNMTO43148 476 aaKnown RBP17.28■□□□□ 0.36
ABCF3-215ENST00000481116 ZNF831Q5JPB2 1677 aa17.28■□□□□ 0.36
ABCF3-215ENST00000481116 MYH14Q7Z406 1995 aaKnown RBP17.28■□□□□ 0.36
ABCF3-215ENST00000481116 AK7Q96M32 723 aa17.27■□□□□ 0.36
ABCF3-215ENST00000481116 TJP1Q07157 1748 aa17.27■□□□□ 0.35
ABCF3-215ENST00000481116 PTCD1O75127 700 aaKnown RBP17.26■□□□□ 0.35
ABCF3-215ENST00000481116 PHF14O94880 888 aa17.26■□□□□ 0.35
ABCF3-215ENST00000481116 U2AF1L5P0DN76 240 aaPredicted RBP17.26■□□□□ 0.35
ABCF3-215ENST00000481116 PRKAR2BP31323 418 aa17.26■□□□□ 0.35
ABCF3-215ENST00000481116 U2AF1Q01081 240 aaKnown RBP eCLIP17.26■□□□□ 0.35
ABCF3-215ENST00000481116 SLC16A10Q8TF71 515 aa17.26■□□□□ 0.35
ABCF3-215ENST00000481116 PHACTR3Q96KR7 559 aa17.26■□□□□ 0.35
ABCF3-215ENST00000481116 RSPH6AQ9H0K4 717 aa17.26■□□□□ 0.35
ABCF3-215ENST00000481116 NUDCQ9Y266 331 aa17.26■□□□□ 0.35
ABCF3-215ENST00000481116 SIPA1L3O60292 1781 aaPredicted RBP17.25■□□□□ 0.35
ABCF3-215ENST00000481116 MSL1Q68DK7 614 aa17.25■□□□□ 0.35
ABCF3-215ENST00000481116 SLC52A2Q9HAB3 445 aa17.25■□□□□ 0.35
ABCF3-215ENST00000481116 DLG5Q8TDM6 1919 aa17.25■□□□□ 0.35
ABCF3-215ENST00000481116 MRC1P22897 1456 aa17.24■□□□□ 0.35
ABCF3-215ENST00000481116 SLC39A6Q13433 755 aa17.24■□□□□ 0.35
ABCF3-215ENST00000481116 ARXQ96QS3 562 aa17.24■□□□□ 0.35
ABCF3-215ENST00000481116 FHDC1Q9C0D6 1143 aaPredicted RBP17.24■□□□□ 0.35
ABCF3-215ENST00000481116 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.22■□□□□ 0.35
ABCF3-215ENST00000481116 GNPATO15228 680 aa17.22■□□□□ 0.35
ABCF3-215ENST00000481116 GAS2L2Q8NHY3 880 aa17.22■□□□□ 0.35
ABCF3-215ENST00000481116 MAP3K5Q99683 1374 aa17.22■□□□□ 0.35
ABCF3-215ENST00000481116 UBR2Q8IWV8 1755 aa17.22■□□□□ 0.35
ABCF3-215ENST00000481116 GNAT3A8MTJ3 354 aa17.21■□□□□ 0.35
ABCF3-215ENST00000481116 KLHL34Q8N239 644 aa17.21■□□□□ 0.35
ABCF3-215ENST00000481116 FLAD1Q8NFF5 587 aa17.21■□□□□ 0.35
ABCF3-215ENST00000481116 IL17REQ8NFR9 667 aa17.21■□□□□ 0.35
ABCF3-215ENST00000481116 SYT17Q9BSW7 474 aa17.21■□□□□ 0.35
ABCF3-215ENST00000481116 HMGB2P26583 209 aaKnown RBP17.2■□□□□ 0.34
ABCF3-215ENST00000481116 POLD1P28340 1107 aa17.2■□□□□ 0.34
ABCF3-215ENST00000481116 C4AP0C0L4 1744 aa17.2■□□□□ 0.34
ABCF3-215ENST00000481116 CICQ96RK0 1608 aaPredicted RBP17.2■□□□□ 0.34
ABCF3-215ENST00000481116 FCHSD2O94868 740 aa17.19■□□□□ 0.34
ABCF3-215ENST00000481116 SSFA2P28290 1259 aa17.19■□□□□ 0.34
ABCF3-215ENST00000481116 ZEB1P37275 1124 aaPredicted RBP17.19■□□□□ 0.34
ABCF3-215ENST00000481116 KCPQ6ZWJ8 1503 aa17.19■□□□□ 0.34
ABCF3-215ENST00000481116 RALBP1Q15311 655 aa17.18■□□□□ 0.34
ABCF3-215ENST00000481116 RTCBQ9Y3I0 505 aaKnown RBP17.17■□□□□ 0.34
ABCF3-215ENST00000481116 CNTNAP4Q9C0A0 1308 aa17.17■□□□□ 0.34
ABCF3-215ENST00000481116 CRKLP46109 303 aaKnown RBP17.16■□□□□ 0.34
ABCF3-215ENST00000481116 TEFQ10587 303 aa17.16■□□□□ 0.34
ABCF3-215ENST00000481116 RC3H1Q5TC82 1133 aaKnown RBP17.16■□□□□ 0.34
ABCF3-215ENST00000481116 DNAJC10Q8IXB1 793 aa17.16■□□□□ 0.34
ABCF3-215ENST00000481116 DCTN1Q14203 1278 aa17.15■□□□□ 0.34
ABCF3-215ENST00000481116 MCM10Q7L590 875 aa17.15■□□□□ 0.34
ABCF3-215ENST00000481116 ARHGEF1Q92888 912 aaKnown RBP17.15■□□□□ 0.34
ABCF3-215ENST00000481116 CEMIPQ8WUJ3 1361 aa17.15■□□□□ 0.34
ABCF3-215ENST00000481116 RPS6KA4O75676 772 aa17.14■□□□□ 0.33
ABCF3-215ENST00000481116 TRAPPC3LQ5T215 181 aa17.14■□□□□ 0.33
ABCF3-215ENST00000481116 KCNQ3O43525 872 aa17.13■□□□□ 0.33
ABCF3-215ENST00000481116 INTS5Q6P9B9 1019 aaKnown RBP17.13■□□□□ 0.33
ABCF3-215ENST00000481116 NLGN2Q8NFZ4 835 aa17.13■□□□□ 0.33
ABCF3-215ENST00000481116 PLEKHF1Q96S99 279 aa17.13■□□□□ 0.33
ABCF3-215ENST00000481116 MYBBP1AQ9BQG0 1328 aaKnown RBP17.13■□□□□ 0.33
ABCF3-215ENST00000481116 TTC5Q8N0Z6 440 aa17.12■□□□□ 0.33
ABCF3-215ENST00000481116 CYP19A1P11511 503 aaPredicted RBP17.11■□□□□ 0.33
ABCF3-215ENST00000481116 ZNF790Q6PG37 636 aa17.11■□□□□ 0.33
ABCF3-215ENST00000481116 RTF1Q92541 710 aaKnown RBP17.11■□□□□ 0.33
ABCF3-215ENST00000481116 ZNF496Q96IT1 587 aaPredicted RBP17.11■□□□□ 0.33
ABCF3-215ENST00000481116 DCAF8L1A6NGE4 600 aa17.1■□□□□ 0.33
ABCF3-215ENST00000481116 BTBD11A6QL63 1104 aa17.1■□□□□ 0.33
ABCF3-215ENST00000481116 RFC4P35249 363 aa17.1■□□□□ 0.33
ABCF3-215ENST00000481116 CCDC87Q9NVE4 849 aa17.1■□□□□ 0.33
ABCF3-215ENST00000481116 SRP68Q9UHB9 627 aaKnown RBP17.1■□□□□ 0.33
ABCF3-215ENST00000481116 NEFMP07197 916 aa17.09■□□□□ 0.33
ABCF3-215ENST00000481116 PRKRIP1Q9H875 184 aaPredicted RBP17.09■□□□□ 0.33
ABCF3-215ENST00000481116 CHD4Q14839 1912 aa17.08■□□□□ 0.33
ABCF3-215ENST00000481116 HEG1Q9ULI3 1381 aa17.08■□□□□ 0.32
ABCF3-215ENST00000481116 GYS1P13807 737 aa17.08■□□□□ 0.32
ABCF3-215ENST00000481116 ADRA2BP18089 450 aa17.08■□□□□ 0.32
ABCF3-215ENST00000481116 VSIG10Q8N0Z9 540 aa17.08■□□□□ 0.32
ABCF3-215ENST00000481116 ZBTB1Q9Y2K1 713 aa17.08■□□□□ 0.32
ABCF3-215ENST00000481116 N4BP2Q86UW6 1770 aaPredicted RBP17.07■□□□□ 0.32
ABCF3-215ENST00000481116 MMP10P09238 476 aa17.07■□□□□ 0.32
ABCF3-215ENST00000481116 PELP1Q8IZL8 1130 aaKnown RBP17.07■□□□□ 0.32
ABCF3-215ENST00000481116 KIF13BQ9NQT8 1826 aa17.07■□□□□ 0.32
ABCF3-215ENST00000481116 SOS1Q07889 1333 aaPredicted RBP17.06■□□□□ 0.32
ABCF3-215ENST00000481116 HTATSF1O43719 755 aaKnown RBP17.06■□□□□ 0.32
ABCF3-215ENST00000481116 CANXP27824 592 aaKnown RBP17.06■□□□□ 0.32
ABCF3-215ENST00000481116 NFE2L2Q16236 605 aa17.06■□□□□ 0.32
ABCF3-215ENST00000481116 THUMPD2Q9BTF0 503 aaKnown RBP17.06■□□□□ 0.32
ABCF3-215ENST00000481116 MIS18AQ9NYP9 233 aa17.06■□□□□ 0.32
ABCF3-215ENST00000481116 KDM3BQ7LBC6 1761 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms