RNA–Protein interactions for RNA: ENST00000481004.1

LINC02040-201, Transcript of long intergenic non-protein coding RNA 2040, humanhuman

TSL 5 BASIC

Gene LINC02040, Length 556 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02040-201ENST00000481004 MS4A1P11836 297 aa8.29□□□□□ -1.08
LINC02040-201ENST00000481004 SLC27A5Q9Y2P5 690 aa8.29□□□□□ -1.08
LINC02040-201ENST00000481004 KNDC1Q76NI1 1749 aa8.29□□□□□ -1.08
LINC02040-201ENST00000481004 LAMC1P11047 1609 aa8.29□□□□□ -1.08
LINC02040-201ENST00000481004 CCDC144AA2RUR9 1427 aa8.29□□□□□ -1.08
LINC02040-201ENST00000481004 DCCP43146 1447 aa8.29□□□□□ -1.08
LINC02040-201ENST00000481004 PTCH1Q13635 1447 aa8.29□□□□□ -1.08
LINC02040-201ENST00000481004 NKX2-3Q8TAU0 364 aa8.28□□□□□ -1.08
LINC02040-201ENST00000481004 SPSB2Q99619 263 aa8.28□□□□□ -1.08
LINC02040-201ENST00000481004 C19orf44Q9H6X5 657 aa8.28□□□□□ -1.08
LINC02040-201ENST00000481004 SALL2Q9Y467 1007 aaPredicted RBP8.28□□□□□ -1.08
LINC02040-201ENST00000481004 PIK3C2GO75747 1445 aa8.28□□□□□ -1.08
LINC02040-201ENST00000481004 NRXN1Q9ULB1 1477 aa8.27□□□□□ -1.09
LINC02040-201ENST00000481004 BRINP3Q76B58 766 aa8.27□□□□□ -1.09
LINC02040-201ENST00000481004 SPIRE2Q8WWL2 714 aa8.27□□□□□ -1.09
LINC02040-201ENST00000481004 DDX17Q92841 729 aaKnown RBP8.27□□□□□ -1.09
LINC02040-201ENST00000481004 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.27□□□□□ -1.09
LINC02040-201ENST00000481004 RPGRIP1LQ68CZ1 1315 aa8.27□□□□□ -1.09
LINC02040-201ENST00000481004 RGS20O76081 388 aa8.26□□□□□ -1.09
LINC02040-201ENST00000481004 PPP1R18Q6NYC8 613 aa8.26□□□□□ -1.09
LINC02040-201ENST00000481004 C14orf37Q86TY3 774 aa8.26□□□□□ -1.09
LINC02040-201ENST00000481004 CDC42BPGQ6DT37 1551 aa8.26□□□□□ -1.09
LINC02040-201ENST00000481004 ANKRD30BQ9BXX2 1392 aa8.25□□□□□ -1.09
LINC02040-201ENST00000481004 PLEKHH1Q9ULM0 1364 aa8.25□□□□□ -1.09
LINC02040-201ENST00000481004 ATF3P18847 181 aa8.25□□□□□ -1.09
LINC02040-201ENST00000481004 RGL3Q3MIN7 710 aa8.25□□□□□ -1.09
LINC02040-201ENST00000481004 POTEAQ6S8J7 498 aa8.25□□□□□ -1.09
LINC02040-201ENST00000481004 TBC1D2Q9BYX2 928 aa8.25□□□□□ -1.09
LINC02040-201ENST00000481004 SLC6A16Q9GZN6 736 aa8.25□□□□□ -1.09
LINC02040-201ENST00000481004 KDM4CQ9H3R0 1056 aa8.25□□□□□ -1.09
LINC02040-201ENST00000481004 TECPR2O15040 1411 aa8.25□□□□□ -1.09
LINC02040-201ENST00000481004 MYOM2P54296 1465 aa8.25□□□□□ -1.09
LINC02040-201ENST00000481004 C1orf167Q5SNV9 1468 aa8.25□□□□□ -1.09
LINC02040-201ENST00000481004 RGPD8O14715 1765 aaPredicted RBP8.25□□□□□ -1.09
LINC02040-201ENST00000481004 JCADQ9P266 1359 aa8.24□□□□□ -1.09
LINC02040-201ENST00000481004 FDX1P10109 184 aa8.24□□□□□ -1.09
LINC02040-201ENST00000481004 BRICD5Q6PL45 260 aa8.24□□□□□ -1.09
LINC02040-201ENST00000481004 HLA-CQ95604 372 aa8.24□□□□□ -1.09
LINC02040-201ENST00000481004 THAP11Q96EK4 314 aa8.24□□□□□ -1.09
LINC02040-201ENST00000481004 DDRGK1Q96HY6 314 aa8.24□□□□□ -1.09
LINC02040-201ENST00000481004 GPBP1L1Q9HC44 474 aaPredicted RBP8.24□□□□□ -1.09
LINC02040-201ENST00000481004 FMN2Q9NZ56 1722 aa8.23□□□□□ -1.09
LINC02040-201ENST00000481004 ADGRB1O14514 1584 aa8.23□□□□□ -1.09
LINC02040-201ENST00000481004 MOXD2PA6NHM9 499 aa8.23□□□□□ -1.09
LINC02040-201ENST00000481004 S1PR4O95977 384 aa8.23□□□□□ -1.09
LINC02040-201ENST00000481004 GUCA2AQ02747 115 aa8.23□□□□□ -1.09
LINC02040-201ENST00000481004 NEUROD2Q15784 382 aa8.23□□□□□ -1.09
LINC02040-201ENST00000481004 TMEM132EQ6IEE7 984 aa8.23□□□□□ -1.09
LINC02040-201ENST00000481004 RNF19BQ6ZMZ0 732 aa8.23□□□□□ -1.09
LINC02040-201ENST00000481004 RSPH6AQ9H0K4 717 aa8.23□□□□□ -1.09
LINC02040-201ENST00000481004 LRPPRCP42704 1394 aaKnown RBP8.22□□□□□ -1.09
LINC02040-201ENST00000481004 GJA5P36382 358 aa8.22□□□□□ -1.09
LINC02040-201ENST00000481004 WAPLQ7Z5K2 1190 aa8.22□□□□□ -1.09
LINC02040-201ENST00000481004 ORAI2Q96SN7 254 aa8.22□□□□□ -1.09
LINC02040-201ENST00000481004 USB1Q9BQ65 265 aaKnown RBP8.22□□□□□ -1.09
LINC02040-201ENST00000481004 USP32Q8NFA0 1604 aa8.21□□□□□ -1.09
LINC02040-201ENST00000481004 YTHDC2Q9H6S0 1430 aaKnown RBP8.21□□□□□ -1.09
LINC02040-201ENST00000481004 PXDNQ92626 1479 aa8.21□□□□□ -1.09
LINC02040-201ENST00000481004 C6orf229H3BNL8 230 aa8.21□□□□□ -1.1
LINC02040-201ENST00000481004 MSS51Q4VC12 460 aa8.21□□□□□ -1.1
LINC02040-201ENST00000481004 STK26Q9P289 416 aa8.21□□□□□ -1.1
LINC02040-201ENST00000481004 COL22A1Q8NFW1 1626 aaPredicted RBP8.21□□□□□ -1.1
LINC02040-201ENST00000481004 DHX57Q6P158 1386 aaKnown RBP8.21□□□□□ -1.1
LINC02040-201ENST00000481004 ABCC11Q96J66 1382 aa8.21□□□□□ -1.1
LINC02040-201ENST00000481004 RNF223E7ERA6 249 aa8.2□□□□□ -1.1
LINC02040-201ENST00000481004 NDUFV2P19404 249 aa8.2□□□□□ -1.1
LINC02040-201ENST00000481004 CFAP70Q5T0N1 1121 aa8.2□□□□□ -1.1
LINC02040-201ENST00000481004 RSBN1LQ6PCB5 846 aaPredicted RBP8.2□□□□□ -1.1
LINC02040-201ENST00000481004 ANKLE1Q8NAG6 615 aa8.2□□□□□ -1.1
LINC02040-201ENST00000481004 C14orf93Q9H972 538 aaKnown RBP8.2□□□□□ -1.1
LINC02040-201ENST00000481004 PNPLA6Q8IY17 1366 aa8.2□□□□□ -1.1
LINC02040-201ENST00000481004 RIC3Q7Z5B4 369 aa8.19□□□□□ -1.1
LINC02040-201ENST00000481004 RETREG3Q86VR2 466 aa8.19□□□□□ -1.1
LINC02040-201ENST00000481004 FAM160A2Q8N612 972 aaPredicted RBP8.19□□□□□ -1.1
LINC02040-201ENST00000481004 ARHGEF28Q8N1W1 1705 aaKnown RBP8.19□□□□□ -1.1
LINC02040-201ENST00000481004 SPATA31A6Q5VVP1 1343 aa8.19□□□□□ -1.1
LINC02040-201ENST00000481004 SPDYE5A6NIY4 337 aa8.18□□□□□ -1.1
LINC02040-201ENST00000481004 SPTLC1O15269 473 aa8.18□□□□□ -1.1
LINC02040-201ENST00000481004 MTMR2Q13614 643 aa8.18□□□□□ -1.1
LINC02040-201ENST00000481004 MYSM1Q5VVJ2 828 aa8.18□□□□□ -1.1
LINC02040-201ENST00000481004 PCDHGC3Q9UN70 934 aa8.18□□□□□ -1.1
LINC02040-201ENST00000481004 SOS2Q07890 1332 aaPredicted RBP8.18□□□□□ -1.1
LINC02040-201ENST00000481004 DLC1Q96QB1 1528 aa8.18□□□□□ -1.1
LINC02040-201ENST00000481004 ADGRB2O60241 1585 aa8.18□□□□□ -1.1
LINC02040-201ENST00000481004 MARF1Q9Y4F3 1742 aaKnown RBP8.17□□□□□ -1.1
LINC02040-201ENST00000481004 PRKCSHP14314 528 aaPredicted RBP8.17□□□□□ -1.1
LINC02040-201ENST00000481004 HRCP23327 699 aa8.17□□□□□ -1.1
LINC02040-201ENST00000481004 BRPF1P55201 1214 aaPredicted RBP8.17□□□□□ -1.1
LINC02040-201ENST00000481004 FAM117AQ9C073 453 aa8.17□□□□□ -1.1
LINC02040-201ENST00000481004 ZBTB3Q9H5J0 574 aa8.17□□□□□ -1.1
LINC02040-201ENST00000481004 ABCA3Q99758 1704 aa8.17□□□□□ -1.1
LINC02040-201ENST00000481004 NUTM2BA6NNL0 878 aaPredicted RBP8.16□□□□□ -1.1
LINC02040-201ENST00000481004 NUTM2EB1AL46 878 aaPredicted RBP8.16□□□□□ -1.1
LINC02040-201ENST00000481004 CLK2P49760 499 aaKnown RBP8.16□□□□□ -1.1
LINC02040-201ENST00000481004 XPCQ01831 940 aaPredicted RBP8.16□□□□□ -1.1
LINC02040-201ENST00000481004 KIF1AQ12756 1690 aa8.16□□□□□ -1.1
LINC02040-201ENST00000481004 NUTM2AQ8IVF1 878 aaPredicted RBP8.16□□□□□ -1.1
LINC02040-201ENST00000481004 SYMPKQ92797 1274 aaKnown RBP8.16□□□□□ -1.1
LINC02040-201ENST00000481004 PRKD2Q9BZL6 878 aa8.16□□□□□ -1.1
LINC02040-201ENST00000481004 PRDM9Q9NQV7 894 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms